RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 CISD3P0C7P0 127 aa9.39□□□□□ -0.91
HDGFL3-201ENST00000299633 SPINK14Q6IE38 97 aa9.39□□□□□ -0.91
HDGFL3-201ENST00000299633 TMEM167AQ8TBQ9 72 aa9.39□□□□□ -0.91
HDGFL3-201ENST00000299633 CFHR5Q9BXR6 569 aa9.39□□□□□ -0.91
HDGFL3-201ENST00000299633 IGHV3-23P01764 117 aa9.39□□□□□ -0.91
HDGFL3-201ENST00000299633 CCL20P78556 96 aa9.39□□□□□ -0.91
HDGFL3-201ENST00000299633 WFDC12Q8WWY7 111 aa9.39□□□□□ -0.91
HDGFL3-201ENST00000299633 LSM4Q9Y4Z0 139 aaKnown RBP9.39□□□□□ -0.91
HDGFL3-201ENST00000299633 CCL13Q99616 98 aa9.38□□□□□ -0.91
HDGFL3-201ENST00000299633 TRBV5-3A0A0A0MS03 114 aa9.38□□□□□ -0.91
HDGFL3-201ENST00000299633 ATOX1O00244 68 aa9.38□□□□□ -0.91
HDGFL3-201ENST00000299633 PRB2P02812 416 aaPredicted RBP9.38□□□□□ -0.91
HDGFL3-201ENST00000299633 ATG4DQ86TL0 474 aaPredicted RBP9.38□□□□□ -0.91
HDGFL3-201ENST00000299633 D6R8Y8 96 aa9.38□□□□□ -0.91
HDGFL3-201ENST00000299633 KCNK17Q96T54 332 aa9.38□□□□□ -0.91
HDGFL3-201ENST00000299633 CRYBA4P53673 196 aa9.38□□□□□ -0.91
HDGFL3-201ENST00000299633 PTGDSP41222 190 aa9.38□□□□□ -0.91
HDGFL3-201ENST00000299633 THAP8Q8NA92 274 aa9.38□□□□□ -0.91
HDGFL3-201ENST00000299633 ZNF703Q9H7S9 590 aaPredicted RBP9.38□□□□□ -0.91
HDGFL3-201ENST00000299633 MSGN1A6NI15 193 aa9.38□□□□□ -0.91
HDGFL3-201ENST00000299633 GAS1P54826 345 aa9.38□□□□□ -0.91
HDGFL3-201ENST00000299633 CENPVQ7Z7K6 275 aaPredicted RBP9.38□□□□□ -0.91
HDGFL3-201ENST00000299633 LHX9Q9NQ69 397 aa9.38□□□□□ -0.91
HDGFL3-201ENST00000299633 A0A1W2PPV9 198 aa9.38□□□□□ -0.91
HDGFL3-201ENST00000299633 EREGO14944 169 aa9.38□□□□□ -0.91
HDGFL3-201ENST00000299633 FAM181AQ8N9Y4 354 aa9.38□□□□□ -0.91
HDGFL3-201ENST00000299633 RAMP3O60896 148 aa9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 UBE2DNLQ8IWF7 75 aa9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 PILRBQ9UKJ0 227 aa9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 A8MWP6 167 aa9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 F6UB75 175 aa9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 STPG4Q8N801 248 aa9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 TRAV13-2A0A0B4J235 113 aa9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 TAX1BP3O14907 124 aa9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 AGFG2O95081 481 aa9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 ZIC1Q15915 447 aa9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 MRPL23Q16540 153 aaKnown RBP9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 SLC25A48Q6ZT89 311 aaKnown RBP9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 MUSTN1Q8IVN3 82 aa9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 CEACAM8P31997 349 aaPredicted RBP9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 CSTL1Q9H114 145 aa9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 STHQ8IWL8 128 aa9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 OSTCQ9NRP0 149 aa9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 IGHV3OR16-13A0A075B7E8 117 aa9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 IGHV3-74A0A0B4J1X5 117 aa9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 IGHV3-35A0A0C4DH35 117 aa9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 PSCAO43653 123 aa9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 FAM60AQ9NP50 221 aa9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 NPSP0C0P6 89 aa9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 MIR17HGQ75NE6 70 aa9.37□□□□□ -0.91
HDGFL3-201ENST00000299633 TRA2AQ13595 282 aaKnown RBP eCLIP9.36□□□□□ -0.91
HDGFL3-201ENST00000299633 GLMPQ8WWB7 406 aa9.36□□□□□ -0.91
HDGFL3-201ENST00000299633 IFI27L2Q9H2X8 130 aa9.36□□□□□ -0.91
HDGFL3-201ENST00000299633 TMEM242Q9NWH2 141 aa9.36□□□□□ -0.91
HDGFL3-201ENST00000299633 ATP5G3P48201 142 aa9.36□□□□□ -0.91
HDGFL3-201ENST00000299633 PRR7Q8TB68 274 aa9.36□□□□□ -0.91
HDGFL3-201ENST00000299633 TRAV14DV4A0A0A6YYC5 116 aa9.36□□□□□ -0.91
HDGFL3-201ENST00000299633 MPV17P39210 176 aa9.36□□□□□ -0.91
HDGFL3-201ENST00000299633 RPP25Q9BUL9 199 aaKnown RBP9.36□□□□□ -0.91
HDGFL3-201ENST00000299633 SLAQ13239 276 aa9.36□□□□□ -0.91
HDGFL3-201ENST00000299633 TMEM190Q8WZ59 177 aa9.36□□□□□ -0.91
HDGFL3-201ENST00000299633 A0A1W2PPM0 123 aa9.36□□□□□ -0.91
HDGFL3-201ENST00000299633 FAM90A20PA6NIJ5 464 aa9.36□□□□□ -0.91
HDGFL3-201ENST00000299633 OR9G1Q8NH87 305 aa9.36□□□□□ -0.91
HDGFL3-201ENST00000299633 SRSF8Q9BRL6 282 aaKnown RBP9.36□□□□□ -0.91
HDGFL3-201ENST00000299633 TIMP3P35625 211 aa9.36□□□□□ -0.91
HDGFL3-201ENST00000299633 IFNL4K9M1U5 179 aa9.36□□□□□ -0.91
HDGFL3-201ENST00000299633 K7ERS5 55 aa9.35□□□□□ -0.91
HDGFL3-201ENST00000299633 CELA3AP09093 270 aa9.35□□□□□ -0.91
HDGFL3-201ENST00000299633 ZNF664Q8N3J9 261 aa9.35□□□□□ -0.91
HDGFL3-201ENST00000299633 IGHV1OR21-1A0A087WYE8 117 aa9.35□□□□□ -0.91
HDGFL3-201ENST00000299633 REG4Q9BYZ8 158 aa9.35□□□□□ -0.91
HDGFL3-201ENST00000299633 TMEM92Q6UXU6 159 aa9.35□□□□□ -0.91
HDGFL3-201ENST00000299633 FOXD3Q9UJU5 478 aaPredicted RBP9.35□□□□□ -0.91
HDGFL3-201ENST00000299633 CTGFP29279 349 aa9.35□□□□□ -0.91
HDGFL3-201ENST00000299633 PKD1L2Q7Z442 2459 aa9.35□□□□□ -0.91
HDGFL3-201ENST00000299633 CENPVL1A0A0U1RR11 272 aa9.35□□□□□ -0.91
HDGFL3-201ENST00000299633 NEGR1Q7Z3B1 354 aa9.35□□□□□ -0.91
HDGFL3-201ENST00000299633 COLCA2A8K830 154 aa9.35□□□□□ -0.91
HDGFL3-201ENST00000299633 SMAD7O15105 426 aaKnown RBP9.35□□□□□ -0.91
HDGFL3-201ENST00000299633 COL9A1P20849 921 aa9.34□□□□□ -0.91
HDGFL3-201ENST00000299633 LCN12Q6JVE5 192 aa9.34□□□□□ -0.91
HDGFL3-201ENST00000299633 TEX38Q6PEX7 206 aa9.34□□□□□ -0.91
HDGFL3-201ENST00000299633 PRIMA1Q86XR5 153 aa9.34□□□□□ -0.91
HDGFL3-201ENST00000299633 CEND1Q8N111 149 aa9.34□□□□□ -0.91
HDGFL3-201ENST00000299633 SCARF2Q96GP6 870 aaPredicted RBP9.34□□□□□ -0.91
HDGFL3-201ENST00000299633 CRLF1O75462 422 aa9.34□□□□□ -0.91
HDGFL3-201ENST00000299633 ETDBQ3ZM63 59 aa9.34□□□□□ -0.91
HDGFL3-201ENST00000299633 DTX4Q9Y2E6 619 aa9.34□□□□□ -0.91
HDGFL3-201ENST00000299633 ADAMTS20P59510 1910 aa9.34□□□□□ -0.91
HDGFL3-201ENST00000299633 C15orf53Q8NAA6 179 aa9.34□□□□□ -0.91
HDGFL3-201ENST00000299633 JPT1Q9UK76 154 aa9.34□□□□□ -0.91
HDGFL3-201ENST00000299633 A0A1B0GWJ7 208 aa9.34□□□□□ -0.91
HDGFL3-201ENST00000299633 CXCL1P09341 107 aa9.34□□□□□ -0.91
HDGFL3-201ENST00000299633 NKAPP1Q8N9T2 125 aa9.34□□□□□ -0.91
HDGFL3-201ENST00000299633 UCN2Q96RP3 112 aa9.34□□□□□ -0.91
HDGFL3-201ENST00000299633 A0A1W2PR77 199 aa9.34□□□□□ -0.91
HDGFL3-201ENST00000299633 FAM90A10PA6NDY2 464 aa9.34□□□□□ -0.91
HDGFL3-201ENST00000299633 FAM90A8PA6NJQ4 464 aa9.34□□□□□ -0.91
HDGFL3-201ENST00000299633 VCYO14598 125 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms