RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 A0A1W2PRE2 83 aa12.57□□□□□ -0.4
UBAP1-201ENST00000297661 FAM231BA6NCW3 169 aa12.57□□□□□ -0.4
UBAP1-201ENST00000297661 ARF6P62330 175 aa12.57□□□□□ -0.4
UBAP1-201ENST00000297661 FNDC4Q9H6D8 234 aaPredicted RBP12.57□□□□□ -0.4
UBAP1-201ENST00000297661 IGLV3-9A0A075B6K5 115 aa12.57□□□□□ -0.4
UBAP1-201ENST00000297661 VWC2LB2RUY7 222 aa12.56□□□□□ -0.4
UBAP1-201ENST00000297661 PPIAL4DF5H284 164 aa12.56□□□□□ -0.4
UBAP1-201ENST00000297661 H0Y8G0 127 aa12.56□□□□□ -0.4
UBAP1-201ENST00000297661 CD24P25063 80 aa12.56□□□□□ -0.4
UBAP1-201ENST00000297661 FOXE3Q13461 319 aa12.56□□□□□ -0.4
UBAP1-201ENST00000297661 UFSP1Q6NVU6 142 aa12.56□□□□□ -0.4
UBAP1-201ENST00000297661 Q6ZS92 163 aa12.56□□□□□ -0.4
UBAP1-201ENST00000297661 FAM231DQ6ZW35 169 aa12.56□□□□□ -0.4
UBAP1-201ENST00000297661 TEX50A0A1B0GTY4 177 aa12.56□□□□□ -0.4
UBAP1-201ENST00000297661 SAA1P0DJI8 122 aaPredicted RBP12.56□□□□□ -0.4
UBAP1-201ENST00000297661 DIAPH2-AS1Q14236 149 aa12.56□□□□□ -0.4
UBAP1-201ENST00000297661 FAM162BQ5T6X4 162 aa12.56□□□□□ -0.4
UBAP1-201ENST00000297661 FAM169BQ8N8A8 192 aa12.56□□□□□ -0.4
UBAP1-201ENST00000297661 MRPL20Q9BYC9 149 aaKnown RBP12.56□□□□□ -0.4
UBAP1-201ENST00000297661 ABCA1O95477 2261 aa12.56□□□□□ -0.4
UBAP1-201ENST00000297661 LRBAP50851 2863 aa12.55□□□□□ -0.4
UBAP1-201ENST00000297661 E7EUB6 86 aa12.55□□□□□ -0.4
UBAP1-201ENST00000297661 MORN5Q5VZ52 161 aa12.55□□□□□ -0.4
UBAP1-201ENST00000297661 IGFL3Q6UXB1 125 aa12.55□□□□□ -0.4
UBAP1-201ENST00000297661 SSX8Q7RTT4 187 aa12.55□□□□□ -0.4
UBAP1-201ENST00000297661 CSMD1Q96PZ7 3565 aa12.55□□□□□ -0.4
UBAP1-201ENST00000297661 TRAV5A0A0B4J249 113 aa12.55□□□□□ -0.4
UBAP1-201ENST00000297661 UPK2O00526 184 aa12.55□□□□□ -0.4
UBAP1-201ENST00000297661 SNAI2O43623 268 aa12.55□□□□□ -0.4
UBAP1-201ENST00000297661 CD40P25942 277 aa12.55□□□□□ -0.4
UBAP1-201ENST00000297661 TAS2R45P59539 299 aa12.55□□□□□ -0.4
UBAP1-201ENST00000297661 SSBP2P81877 361 aaPredicted RBP12.55□□□□□ -0.4
UBAP1-201ENST00000297661 PRB3Q04118 309 aaPredicted RBP12.55□□□□□ -0.4
UBAP1-201ENST00000297661 C10orf55Q5SWW7 151 aa12.55□□□□□ -0.4
UBAP1-201ENST00000297661 GTF2H5Q6ZYL4 71 aa12.55□□□□□ -0.4
UBAP1-201ENST00000297661 FAM222BQ8WU58 562 aa12.55□□□□□ -0.4
UBAP1-201ENST00000297661 ZNF788Q6ZQV5 615 aa12.54□□□□□ -0.4
UBAP1-201ENST00000297661 C5orf17Q8NAS9 161 aa12.54□□□□□ -0.4
UBAP1-201ENST00000297661 CHCHD1Q96BP2 118 aaKnown RBP12.54□□□□□ -0.4
UBAP1-201ENST00000297661 PMCHL2Q9BQD1 86 aa12.54□□□□□ -0.4
UBAP1-201ENST00000297661 MS4A6AQ9H2W1 248 aa12.54□□□□□ -0.4
UBAP1-201ENST00000297661 A0A1B0GXF2 115 aa12.54□□□□□ -0.4
UBAP1-201ENST00000297661 APOA2P02652 100 aa12.54□□□□□ -0.4
UBAP1-201ENST00000297661 PRCDQ00LT1 54 aa12.54□□□□□ -0.4
UBAP1-201ENST00000297661 C2orf91Q6ZV80 131 aa12.54□□□□□ -0.4
UBAP1-201ENST00000297661 SVIPQ8NHG7 77 aa12.54□□□□□ -0.4
UBAP1-201ENST00000297661 MAP1LC3CQ9BXW4 147 aa12.54□□□□□ -0.4
UBAP1-201ENST00000297661 RPUSD1Q9UJJ7 312 aaKnown RBP12.54□□□□□ -0.4
UBAP1-201ENST00000297661 FCN3O75636 299 aa12.53□□□□□ -0.4
UBAP1-201ENST00000297661 HTR1DP28221 377 aa12.53□□□□□ -0.4
UBAP1-201ENST00000297661 GATA4P43694 442 aa12.53□□□□□ -0.4
UBAP1-201ENST00000297661 RTL8BQ17RB0 113 aa12.53□□□□□ -0.4
UBAP1-201ENST00000297661 TCF24Q7RTU0 167 aa12.53□□□□□ -0.4
UBAP1-201ENST00000297661 PRNDQ9UKY0 176 aa12.53□□□□□ -0.4
UBAP1-201ENST00000297661 AMMECR1Q9Y4X0 333 aaPredicted RBP12.53□□□□□ -0.4
UBAP1-201ENST00000297661 UQCRFS1P47985 274 aa12.53□□□□□ -0.4
UBAP1-201ENST00000297661 SLC25A48Q6ZT89 311 aaKnown RBP12.53□□□□□ -0.4
UBAP1-201ENST00000297661 ATP5L2Q7Z4Y8 100 aa12.53□□□□□ -0.4
UBAP1-201ENST00000297661 H1FXQ92522 213 aaKnown RBP12.53□□□□□ -0.4
UBAP1-201ENST00000297661 AP1S3Q96PC3 154 aa12.53□□□□□ -0.4
UBAP1-201ENST00000297661 MYO18BQ8IUG5 2567 aa12.53□□□□□ -0.4
UBAP1-201ENST00000297661 C8orf88P0DMB2 117 aa12.53□□□□□ -0.4
UBAP1-201ENST00000297661 SEC11AP67812 179 aa12.53□□□□□ -0.4
UBAP1-201ENST00000297661 UBE2L3P68036 154 aaKnown RBP12.53□□□□□ -0.4
UBAP1-201ENST00000297661 TMEM97Q5BJF2 176 aa12.53□□□□□ -0.4
UBAP1-201ENST00000297661 PET117Q6UWS5 81 aa12.53□□□□□ -0.4
UBAP1-201ENST00000297661 BPIFA4PQ86YQ2 179 aa12.53□□□□□ -0.4
UBAP1-201ENST00000297661 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.53□□□□□ -0.4
UBAP1-201ENST00000297661 OR1N2Q8NGR9 330 aa12.53□□□□□ -0.4
UBAP1-201ENST00000297661 HARBI1Q96MB7 349 aa12.53□□□□□ -0.4
UBAP1-201ENST00000297661 JMJD8Q96S16 334 aa12.53□□□□□ -0.4
UBAP1-201ENST00000297661 SLC25A33Q9BSK2 321 aa12.53□□□□□ -0.4
UBAP1-201ENST00000297661 DLX1P56177 255 aa12.52□□□□□ -0.41
UBAP1-201ENST00000297661 TNFRSF14Q92956 283 aa12.52□□□□□ -0.41
UBAP1-201ENST00000297661 APELAP0DMC3 54 aa12.52□□□□□ -0.41
UBAP1-201ENST00000297661 COX8AP10176 69 aa12.52□□□□□ -0.41
UBAP1-201ENST00000297661 HIST1H1EP10412 219 aaKnown RBP12.52□□□□□ -0.41
UBAP1-201ENST00000297661 HBBP68871 147 aa12.52□□□□□ -0.41
UBAP1-201ENST00000297661 RBPJQ06330 500 aa12.52□□□□□ -0.41
UBAP1-201ENST00000297661 CCL17Q92583 94 aa12.52□□□□□ -0.41
UBAP1-201ENST00000297661 TMEM186Q96B77 213 aa12.52□□□□□ -0.41
UBAP1-201ENST00000297661 ADTRPQ96IZ2 230 aa12.52□□□□□ -0.41
UBAP1-201ENST00000297661 GOSR1O95249 250 aa12.51□□□□□ -0.41
UBAP1-201ENST00000297661 LIPFP07098 398 aa12.51□□□□□ -0.41
UBAP1-201ENST00000297661 RNASE2P10153 161 aaKnown RBP12.51□□□□□ -0.41
UBAP1-201ENST00000297661 LGALS7P47929 136 aa12.51□□□□□ -0.41
UBAP1-201ENST00000297661 KLRB1Q12918 225 aa12.51□□□□□ -0.41
UBAP1-201ENST00000297661 NAA38Q9BRA0 125 aaKnown RBP12.51□□□□□ -0.41
UBAP1-201ENST00000297661 TIMM8BQ9Y5J9 83 aaPredicted RBP12.51□□□□□ -0.41
UBAP1-201ENST00000297661 DCHS2Q6V1P9 2916 aa12.51□□□□□ -0.41
UBAP1-201ENST00000297661 SPTAN1Q13813 2472 aaKnown RBP12.51□□□□□ -0.41
UBAP1-201ENST00000297661 C9orf118A6NHY6 69 aa12.51□□□□□ -0.41
UBAP1-201ENST00000297661 H3BUT2 72 aa12.51□□□□□ -0.41
UBAP1-201ENST00000297661 ZNF138P52744 262 aa12.51□□□□□ -0.41
UBAP1-201ENST00000297661 FLNCQ14315 2725 aa12.5□□□□□ -0.41
UBAP1-201ENST00000297661 hADV38S2A0JD32 116 aa12.5□□□□□ -0.41
UBAP1-201ENST00000297661 PLAUP00749 431 aa12.5□□□□□ -0.41
UBAP1-201ENST00000297661 APOBEC3AP31941 199 aaPredicted RBP12.5□□□□□ -0.41
UBAP1-201ENST00000297661 LYPD2Q6UXB3 125 aa12.5□□□□□ -0.41
UBAP1-201ENST00000297661 FNDC10F2Z333 226 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms