RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 ACSM6Q6P461 480 aa13.79□□□□□ -0.2
CCDC78-201ENST00000293889 SSX7Q7RTT5 188 aa13.79□□□□□ -0.2
CCDC78-201ENST00000293889 Q8WTZ3 238 aa13.79□□□□□ -0.2
CCDC78-201ENST00000293889 C21orf62Q9NYP8 219 aa13.79□□□□□ -0.2
CCDC78-201ENST00000293889 A0A0G2JLM5 398 aa13.78□□□□□ -0.2
CCDC78-201ENST00000293889 A0A1B0GUS0 222 aa13.78□□□□□ -0.2
CCDC78-201ENST00000293889 PCP4L1A6NKN8 68 aa13.78□□□□□ -0.2
CCDC78-201ENST00000293889 ZNF491Q8N8L2 437 aa13.78□□□□□ -0.2
CCDC78-201ENST00000293889 TMEM116Q8NCL8 245 aa13.78□□□□□ -0.2
CCDC78-201ENST00000293889 OR4X2Q8NGF9 303 aa13.78□□□□□ -0.2
CCDC78-201ENST00000293889 ZNF502Q8TBZ5 544 aa13.78□□□□□ -0.2
CCDC78-201ENST00000293889 NPIPB3Q92617 1050 aa13.78□□□□□ -0.2
CCDC78-201ENST00000293889 EEF1AKMT3Q96AZ1 226 aa13.78□□□□□ -0.2
CCDC78-201ENST00000293889 TMPRSS5Q9H3S3 457 aa13.78□□□□□ -0.2
CCDC78-201ENST00000293889 UBE2L5PA0A1B0GUS4 154 aa13.77□□□□□ -0.21
CCDC78-201ENST00000293889 MAP1LC3B2A6NCE7 125 aa13.77□□□□□ -0.21
CCDC78-201ENST00000293889 ZNF727A8MUV8 499 aa13.77□□□□□ -0.21
CCDC78-201ENST00000293889 F8W735 103 aaPredicted RBP13.77□□□□□ -0.21
CCDC78-201ENST00000293889 IGHV3-11P01762 117 aa13.77□□□□□ -0.21
CCDC78-201ENST00000293889 CD28P10747 220 aa13.77□□□□□ -0.21
CCDC78-201ENST00000293889 MFAP4P55083 255 aa13.77□□□□□ -0.21
CCDC78-201ENST00000293889 HIST2H2BDQ6DRA6 164 aa13.77□□□□□ -0.21
CCDC78-201ENST00000293889 TREML4Q6UXN2 200 aa13.77□□□□□ -0.21
CCDC78-201ENST00000293889 OR4X1Q8NH49 305 aa13.77□□□□□ -0.21
CCDC78-201ENST00000293889 MAP1LC3BQ9GZQ8 125 aa13.77□□□□□ -0.21
CCDC78-201ENST00000293889 NPVFQ9HCQ7 196 aa13.77□□□□□ -0.21
CCDC78-201ENST00000293889 CTXND1A0A1B0GTU2 59 aa13.76□□□□□ -0.21
CCDC78-201ENST00000293889 TMEM250H0YL14 139 aa13.76□□□□□ -0.21
CCDC78-201ENST00000293889 CXCL1P09341 107 aa13.76□□□□□ -0.21
CCDC78-201ENST00000293889 LCN15Q6UWW0 184 aa13.76□□□□□ -0.21
CCDC78-201ENST00000293889 TMEM144Q7Z5S9 345 aa13.76□□□□□ -0.21
CCDC78-201ENST00000293889 RPP25LQ8N5L8 163 aaKnown RBP13.76□□□□□ -0.21
CCDC78-201ENST00000293889 C11orf44Q8N8P7 122 aa13.76□□□□□ -0.21
CCDC78-201ENST00000293889 CCDC140Q96MF4 163 aa13.76□□□□□ -0.21
CCDC78-201ENST00000293889 TRBV7-1A0A0A6YYK4 115 aa13.75□□□□□ -0.21
CCDC78-201ENST00000293889 RPS10P46783 165 aaKnown RBP13.75□□□□□ -0.21
CCDC78-201ENST00000293889 KRTAP10-3P60369 221 aa13.75□□□□□ -0.21
CCDC78-201ENST00000293889 Q56UQ5 140 aa13.75□□□□□ -0.21
CCDC78-201ENST00000293889 UBE2E2Q96LR5 201 aa13.75□□□□□ -0.21
CCDC78-201ENST00000293889 SLC39A9Q9NUM3 307 aa13.75□□□□□ -0.21
CCDC78-201ENST00000293889 WDR83OSQ9Y284 106 aa13.75□□□□□ -0.21
CCDC78-201ENST00000293889 TRBV24-1A0A075B6N3 115 aa13.75□□□□□ -0.21
CCDC78-201ENST00000293889 IGKV1OR2-108A0A075B7D4 117 aa13.75□□□□□ -0.21
CCDC78-201ENST00000293889 CLN5O75503 358 aa13.75□□□□□ -0.21
CCDC78-201ENST00000293889 FCGR2BP31994 310 aaPredicted RBP13.75□□□□□ -0.21
CCDC78-201ENST00000293889 CDX1P47902 265 aaPredicted RBP13.75□□□□□ -0.21
CCDC78-201ENST00000293889 ZNF343Q6P1L6 599 aa13.75□□□□□ -0.21
CCDC78-201ENST00000293889 OR5B12Q96R08 314 aa13.75□□□□□ -0.21
CCDC78-201ENST00000293889 TXN2Q99757 166 aa13.75□□□□□ -0.21
CCDC78-201ENST00000293889 GNB4Q9HAV0 340 aa13.75□□□□□ -0.21
CCDC78-201ENST00000293889 LSM4Q9Y4Z0 139 aaKnown RBP13.75□□□□□ -0.21
CCDC78-201ENST00000293889 TCRBV4S1A1TA0A5B7 111 aa13.74□□□□□ -0.21
CCDC78-201ENST00000293889 OR2T8A6NH00 312 aa13.74□□□□□ -0.21
CCDC78-201ENST00000293889 ZFP92A6NM28 416 aa13.74□□□□□ -0.21
CCDC78-201ENST00000293889 FGF7P21781 194 aa13.74□□□□□ -0.21
CCDC78-201ENST00000293889 TEPPQ6URK8 271 aa13.74□□□□□ -0.21
CCDC78-201ENST00000293889 CLEC19AQ6UXS0 136 aa13.74□□□□□ -0.21
CCDC78-201ENST00000293889 CYP2G1PQ6ZSU1 146 aa13.74□□□□□ -0.21
CCDC78-201ENST00000293889 THAP8Q8NA92 274 aa13.74□□□□□ -0.21
CCDC78-201ENST00000293889 OR51M1Q9H341 326 aa13.74□□□□□ -0.21
CCDC78-201ENST00000293889 MANBALQ9NQG1 85 aa13.74□□□□□ -0.21
CCDC78-201ENST00000293889 NAT8Q9UHE5 227 aa13.74□□□□□ -0.21
CCDC78-201ENST00000293889 IGKV1D-37A0A075B6S9 117 aa13.73□□□□□ -0.21
CCDC78-201ENST00000293889 GNG7O60262 68 aa13.73□□□□□ -0.21
CCDC78-201ENST00000293889 CLEC3BP05452 202 aa13.73□□□□□ -0.21
CCDC78-201ENST00000293889 OR10J1P30954 320 aa13.73□□□□□ -0.21
CCDC78-201ENST00000293889 GPR183P32249 361 aa13.73□□□□□ -0.21
CCDC78-201ENST00000293889 CD81P60033 236 aa13.73□□□□□ -0.21
CCDC78-201ENST00000293889 KHDC1LQ5JSQ8 128 aa13.73□□□□□ -0.21
CCDC78-201ENST00000293889 C12orf54Q6X4T0 127 aa13.73□□□□□ -0.21
CCDC78-201ENST00000293889 C18orf65Q6ZTR6 163 aa13.73□□□□□ -0.21
CCDC78-201ENST00000293889 CITED2Q99967 270 aaPredicted RBP13.73□□□□□ -0.21
CCDC78-201ENST00000293889 PYGO2Q9BRQ0 406 aa13.73□□□□□ -0.21
CCDC78-201ENST00000293889 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.72□□□□□ -0.21
CCDC78-201ENST00000293889 TRBV12-3P01733 135 aa13.72□□□□□ -0.21
CCDC78-201ENST00000293889 IGLC1P0CG04 106 aa13.72□□□□□ -0.21
CCDC78-201ENST00000293889 CEBPGP53567 150 aa13.72□□□□□ -0.21
CCDC78-201ENST00000293889 MEF2BQ02080 365 aaPredicted RBP13.72□□□□□ -0.21
CCDC78-201ENST00000293889 WFDC12Q8WWY7 111 aa13.72□□□□□ -0.21
CCDC78-201ENST00000293889 ATP6V0BQ99437 205 aa13.72□□□□□ -0.21
CCDC78-201ENST00000293889 MGST2Q99735 147 aa13.72□□□□□ -0.21
CCDC78-201ENST00000293889 ACTR3CQ9C0K3 210 aaPredicted RBP13.72□□□□□ -0.21
CCDC78-201ENST00000293889 ELOA3CA0A087WX78 387 aaPredicted RBP13.72□□□□□ -0.21
CCDC78-201ENST00000293889 PHOX2AO14813 284 aa13.72□□□□□ -0.21
CCDC78-201ENST00000293889 IGKV1-17P01599 117 aa13.72□□□□□ -0.21
CCDC78-201ENST00000293889 CTSGP08311 255 aa13.72□□□□□ -0.21
CCDC78-201ENST00000293889 LGALS1P09382 135 aaKnown RBP13.72□□□□□ -0.21
CCDC78-201ENST00000293889 FGF8P55075 233 aaPredicted RBP13.72□□□□□ -0.21
CCDC78-201ENST00000293889 ZNF674Q2M3X9 581 aa13.72□□□□□ -0.21
CCDC78-201ENST00000293889 TIGITQ495A1 244 aa13.72□□□□□ -0.21
CCDC78-201ENST00000293889 DNLZQ5SXM8 178 aa13.72□□□□□ -0.21
CCDC78-201ENST00000293889 SPATA3Q8NHX4 192 aa13.72□□□□□ -0.21
CCDC78-201ENST00000293889 FAM210BQ96KR6 192 aa13.72□□□□□ -0.21
CCDC78-201ENST00000293889 CHRDL1Q9BU40 450 aa13.72□□□□□ -0.21
CCDC78-201ENST00000293889 GAR1Q9NY12 217 aaKnown RBP13.72□□□□□ -0.21
CCDC78-201ENST00000293889 DOK5Q9P104 306 aa13.72□□□□□ -0.21
CCDC78-201ENST00000293889 TGIF2-C20orf24A0A0A6YYL0 155 aa13.71□□□□□ -0.22
CCDC78-201ENST00000293889 SEC14L6B5MCN3 397 aa13.71□□□□□ -0.22
CCDC78-201ENST00000293889 PPP5D1E7EU14 171 aa13.71□□□□□ -0.22
CCDC78-201ENST00000293889 C17orf112F2Z3M2 114 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms