RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 BLNKQ8WV28 456 aa11.08□□□□□ -0.64
ABCF3-201ENST00000292808 FXYD5Q96DB9 178 aa11.08□□□□□ -0.64
ABCF3-201ENST00000292808 LINC00479Q96M42 142 aa11.08□□□□□ -0.64
ABCF3-201ENST00000292808 HYPMO75409 117 aa11.07□□□□□ -0.64
ABCF3-201ENST00000292808 COL8A1P27658 744 aa11.07□□□□□ -0.64
ABCF3-201ENST00000292808 KRTAP10-9P60411 292 aa11.07□□□□□ -0.64
ABCF3-201ENST00000292808 KLF17Q5JT82 389 aaPredicted RBP11.07□□□□□ -0.64
ABCF3-201ENST00000292808 LEMD1Q68G75 181 aa11.07□□□□□ -0.64
ABCF3-201ENST00000292808 CSMD1Q96PZ7 3565 aa11.07□□□□□ -0.64
ABCF3-201ENST00000292808 IGLC1P0CG04 106 aa11.07□□□□□ -0.64
ABCF3-201ENST00000292808 LYZP61626 148 aa11.07□□□□□ -0.64
ABCF3-201ENST00000292808 RANP62826 216 aaKnown RBP11.07□□□□□ -0.64
ABCF3-201ENST00000292808 COX19Q49B96 90 aa11.07□□□□□ -0.64
ABCF3-201ENST00000292808 ZNF562Q6V9R5 426 aa11.07□□□□□ -0.64
ABCF3-201ENST00000292808 OR1L6Q8NGR2 347 aa11.07□□□□□ -0.64
ABCF3-201ENST00000292808 GNB1LQ9BYB4 327 aa11.07□□□□□ -0.64
ABCF3-201ENST00000292808 CSMD2Q7Z408 3487 aa11.06□□□□□ -0.64
ABCF3-201ENST00000292808 K7EIM0 57 aa11.06□□□□□ -0.64
ABCF3-201ENST00000292808 RD3LP0DJH9 198 aa11.06□□□□□ -0.64
ABCF3-201ENST00000292808 EGR2P11161 476 aaPredicted RBP11.06□□□□□ -0.64
ABCF3-201ENST00000292808 PSG1P11464 419 aa11.06□□□□□ -0.64
ABCF3-201ENST00000292808 CBLN1P23435 193 aa11.06□□□□□ -0.64
ABCF3-201ENST00000292808 C9orf152Q5JTZ5 239 aa11.06□□□□□ -0.64
ABCF3-201ENST00000292808 ZNF329Q86UD4 541 aa11.06□□□□□ -0.64
ABCF3-201ENST00000292808 ARPC1AQ92747 370 aa11.06□□□□□ -0.64
ABCF3-201ENST00000292808 MRPL18Q9H0U6 180 aaKnown RBP11.06□□□□□ -0.64
ABCF3-201ENST00000292808 S4R3C0 116 aa11.06□□□□□ -0.64
ABCF3-201ENST00000292808 KMT2BQ9UMN6 2715 aaPredicted RBP11.06□□□□□ -0.64
ABCF3-201ENST00000292808 POLQO75417 2590 aa11.06□□□□□ -0.64
ABCF3-201ENST00000292808 MGST1P10620 155 aaKnown RBP11.06□□□□□ -0.64
ABCF3-201ENST00000292808 MYCNOSP40205 109 aa11.06□□□□□ -0.64
ABCF3-201ENST00000292808 PLP1P60201 277 aa11.06□□□□□ -0.64
ABCF3-201ENST00000292808 OR8I2Q8N0Y5 310 aa11.06□□□□□ -0.64
ABCF3-201ENST00000292808 LINC00469Q8N7U9 141 aa11.06□□□□□ -0.64
ABCF3-201ENST00000292808 NHLRC2Q8NBF2 726 aa11.06□□□□□ -0.64
ABCF3-201ENST00000292808 RNASE7Q9H1E1 156 aaKnown RBP11.06□□□□□ -0.64
ABCF3-201ENST00000292808 A0A096LNT2 108 aa11.05□□□□□ -0.64
ABCF3-201ENST00000292808 IGHV7-81A0A0B4J1V7 117 aa11.05□□□□□ -0.64
ABCF3-201ENST00000292808 TRAV34A0A0B4J273 112 aa11.05□□□□□ -0.64
ABCF3-201ENST00000292808 IGHV1-69DA0A0B4J2H0 117 aa11.05□□□□□ -0.64
ABCF3-201ENST00000292808 H3BTX0 84 aa11.05□□□□□ -0.64
ABCF3-201ENST00000292808 GATCO43716 136 aaKnown RBP11.05□□□□□ -0.64
ABCF3-201ENST00000292808 IGHV1-69P01742 117 aa11.05□□□□□ -0.64
ABCF3-201ENST00000292808 FAM106CPP0CH98 169 aa11.05□□□□□ -0.64
ABCF3-201ENST00000292808 FAM209BQ5JX69 171 aa11.05□□□□□ -0.64
ABCF3-201ENST00000292808 TMEM256Q8N2U0 113 aa11.05□□□□□ -0.64
ABCF3-201ENST00000292808 RASL11BQ9BPW5 248 aa11.05□□□□□ -0.64
ABCF3-201ENST00000292808 USP9YO00507 2555 aaPredicted RBP11.05□□□□□ -0.64
ABCF3-201ENST00000292808 ANKRD17O75179 2603 aaKnown RBP11.05□□□□□ -0.64
ABCF3-201ENST00000292808 TRAV40A0A0B4J280 105 aa11.04□□□□□ -0.64
ABCF3-201ENST00000292808 SMIM27A0A1W2PRY6 76 aa11.04□□□□□ -0.64
ABCF3-201ENST00000292808 TSTD3H0UI37 97 aa11.04□□□□□ -0.64
ABCF3-201ENST00000292808 IGHV4-38-2P0DP08 117 aa11.04□□□□□ -0.64
ABCF3-201ENST00000292808 ESDP10768 282 aa11.04□□□□□ -0.64
ABCF3-201ENST00000292808 GNG5P63218 68 aa11.04□□□□□ -0.64
ABCF3-201ENST00000292808 IBA57Q5T440 356 aaKnown RBP11.04□□□□□ -0.64
ABCF3-201ENST00000292808 BRD3OSQ6XYD6 125 aa11.04□□□□□ -0.64
ABCF3-201ENST00000292808 FAM231DQ6ZW35 169 aa11.04□□□□□ -0.64
ABCF3-201ENST00000292808 HSPB9Q9BQS6 159 aa11.04□□□□□ -0.64
ABCF3-201ENST00000292808 SOX21Q9Y651 276 aaPredicted RBP11.04□□□□□ -0.64
ABCF3-201ENST00000292808 PTPN13Q12923 2485 aa11.04□□□□□ -0.64
ABCF3-201ENST00000292808 NPIPB5A8MRT5 1133 aa11.04□□□□□ -0.64
ABCF3-201ENST00000292808 PEX7O00628 323 aa11.04□□□□□ -0.64
ABCF3-201ENST00000292808 MT-ND6P03923 174 aa11.04□□□□□ -0.64
ABCF3-201ENST00000292808 MSMBP08118 114 aa11.04□□□□□ -0.64
ABCF3-201ENST00000292808 IER3P46695 156 aa11.04□□□□□ -0.64
ABCF3-201ENST00000292808 WDR73Q6P4I2 378 aa11.04□□□□□ -0.64
ABCF3-201ENST00000292808 RBM14Q96PK6 669 aaKnown RBP11.04□□□□□ -0.64
ABCF3-201ENST00000292808 FANCD2OSQ96PS1 177 aa11.04□□□□□ -0.64
ABCF3-201ENST00000292808 HIGD1AQ9Y241 93 aa11.04□□□□□ -0.64
ABCF3-201ENST00000292808 CHD6Q8TD26 2715 aa11.04□□□□□ -0.64
ABCF3-201ENST00000292808 IGLV11-55A0A075B6I3 123 aa11.03□□□□□ -0.64
ABCF3-201ENST00000292808 BRS3P32247 399 aa11.03□□□□□ -0.64
ABCF3-201ENST00000292808 RPH3ALQ9UNE2 315 aa11.03□□□□□ -0.64
ABCF3-201ENST00000292808 CELSR1Q9NYQ6 3014 aa11.03□□□□□ -0.64
ABCF3-201ENST00000292808 SNURFLB1AK76 121 aa11.03□□□□□ -0.64
ABCF3-201ENST00000292808 NUPR1O60356 82 aa11.03□□□□□ -0.64
ABCF3-201ENST00000292808 IGKV1-17P01599 117 aa11.03□□□□□ -0.64
ABCF3-201ENST00000292808 HLA-DRB1P01911 266 aa11.03□□□□□ -0.64
ABCF3-201ENST00000292808 NBEAP1P0C6P0 100 aa11.03□□□□□ -0.64
ABCF3-201ENST00000292808 CRISP2P16562 243 aa11.03□□□□□ -0.64
ABCF3-201ENST00000292808 DSCR9P59020 149 aa11.03□□□□□ -0.64
ABCF3-201ENST00000292808 Q0VG73 95 aa11.03□□□□□ -0.64
ABCF3-201ENST00000292808 TTC9CQ8N5M4 171 aa11.03□□□□□ -0.64
ABCF3-201ENST00000292808 PIFOQ8TCI5 191 aa11.03□□□□□ -0.64
ABCF3-201ENST00000292808 TP53TG3Q9ULZ0 132 aa11.03□□□□□ -0.64
ABCF3-201ENST00000292808 CENPEQ02224 2701 aa11.03□□□□□ -0.64
ABCF3-201ENST00000292808 MAP1AP78559 2803 aaPredicted RBP11.03□□□□□ -0.64
ABCF3-201ENST00000292808 PGPA6NDG6 321 aa11.02□□□□□ -0.64
ABCF3-201ENST00000292808 SLC25A5P05141 298 aaKnown RBP11.02□□□□□ -0.64
ABCF3-201ENST00000292808 DEFA6Q01524 100 aa11.02□□□□□ -0.64
ABCF3-201ENST00000292808 SGK494Q96LW2 274 aa11.02□□□□□ -0.64
ABCF3-201ENST00000292808 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.02□□□□□ -0.648e-7■■■■□ 20.9
ABCF3-201ENST00000292808 A0A1B0GUS0 222 aa11.02□□□□□ -0.65
ABCF3-201ENST00000292808 AVPP01185 164 aa11.02□□□□□ -0.65
ABCF3-201ENST00000292808 FRMD6-AS1P0C7T7 363 aa11.02□□□□□ -0.65
ABCF3-201ENST00000292808 DDTP30046 118 aa11.02□□□□□ -0.65
ABCF3-201ENST00000292808 PAFAH1B2P68402 229 aa11.02□□□□□ -0.65
ABCF3-201ENST00000292808 TMEM183BQ1AE95 376 aa11.02□□□□□ -0.65
ABCF3-201ENST00000292808 BAGE2Q86Y30 109 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms