RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 NLRC5Q86WI3 1866 aa10.44□□□□□ -0.74
PTCD1-201ENST00000292478 RBMY1BA6NDE4 496 aaKnown RBP10.44□□□□□ -0.74
PTCD1-201ENST00000292478 RBMY1EA6NEQ0 496 aaKnown RBP10.44□□□□□ -0.74
PTCD1-201ENST00000292478 GHRHP01286 108 aa10.44□□□□□ -0.74
PTCD1-201ENST00000292478 RBMY1DP0C7P1 496 aaKnown RBP10.44□□□□□ -0.74
PTCD1-201ENST00000292478 RBMY1A1P0DJD3 496 aaKnown RBP10.44□□□□□ -0.74
PTCD1-201ENST00000292478 RBMY1CP0DJD4 496 aa10.44□□□□□ -0.74
PTCD1-201ENST00000292478 GLRX5Q86SX6 157 aa10.44□□□□□ -0.74
PTCD1-201ENST00000292478 GLMPQ8WWB7 406 aa10.44□□□□□ -0.74
PTCD1-201ENST00000292478 PSG3Q16557 428 aa10.43□□□□□ -0.74
PTCD1-201ENST00000292478 TNFSF13O75888 250 aa10.43□□□□□ -0.74
PTCD1-201ENST00000292478 PRTN3P24158 256 aa10.43□□□□□ -0.74
PTCD1-201ENST00000292478 TCF20Q9UGU0 1960 aaKnown RBP10.43□□□□□ -0.74
PTCD1-201ENST00000292478 A0A0G2JRQ6 117 aa10.43□□□□□ -0.74
PTCD1-201ENST00000292478 NPIPB5A8MRT5 1133 aa10.43□□□□□ -0.74
PTCD1-201ENST00000292478 SNAI2O43623 268 aa10.43□□□□□ -0.74
PTCD1-201ENST00000292478 AMBPP02760 352 aa10.43□□□□□ -0.74
PTCD1-201ENST00000292478 LAGE3Q14657 143 aa10.43□□□□□ -0.74
PTCD1-201ENST00000292478 CFAP161Q6P656 301 aa10.43□□□□□ -0.74
PTCD1-201ENST00000292478 MRPL27Q9P0M9 148 aaKnown RBP10.43□□□□□ -0.74
PTCD1-201ENST00000292478 ZNF581Q9P0T4 197 aa10.43□□□□□ -0.74
PTCD1-201ENST00000292478 PROK2Q9HC23 129 aa10.42□□□□□ -0.74
PTCD1-201ENST00000292478 MSRB2Q9Y3D2 182 aa10.42□□□□□ -0.74
PTCD1-201ENST00000292478 LINC00587B1AMM8 73 aa10.42□□□□□ -0.74
PTCD1-201ENST00000292478 SLC25A16P16260 332 aa10.42□□□□□ -0.74
PTCD1-201ENST00000292478 KLRD1Q13241 179 aa10.42□□□□□ -0.74
PTCD1-201ENST00000292478 PDE6HQ13956 83 aa10.42□□□□□ -0.74
PTCD1-201ENST00000292478 IGKV2-40A0A087WW87 121 aaPredicted RBP10.42□□□□□ -0.74
PTCD1-201ENST00000292478 A0A1B0GWB2 263 aa10.42□□□□□ -0.74
PTCD1-201ENST00000292478 NDUFS8O00217 210 aa10.42□□□□□ -0.74
PTCD1-201ENST00000292478 IGKV2D-40P01614 121 aaPredicted RBP10.42□□□□□ -0.74
PTCD1-201ENST00000292478 Q6ZRM9 215 aa10.42□□□□□ -0.74
PTCD1-201ENST00000292478 EXOC3-AS1Q8N2X6 119 aa10.42□□□□□ -0.74
PTCD1-201ENST00000292478 PTPRDP23468 1912 aa10.42□□□□□ -0.74
PTCD1-201ENST00000292478 CA1P00915 261 aaPredicted RBP10.42□□□□□ -0.74
PTCD1-201ENST00000292478 OR9G4Q8NGQ1 327 aa10.42□□□□□ -0.74
PTCD1-201ENST00000292478 C1orf147Q96MC9 270 aaPredicted RBP10.42□□□□□ -0.74
PTCD1-201ENST00000292478 GFRA4Q9GZZ7 299 aa10.42□□□□□ -0.74
PTCD1-201ENST00000292478 ERVK11-1P61568 191 aa10.42□□□□□ -0.74
PTCD1-201ENST00000292478 SEC11AP67812 179 aa10.42□□□□□ -0.74
PTCD1-201ENST00000292478 A0A1W2PRX2 142 aa10.41□□□□□ -0.74
PTCD1-201ENST00000292478 WDR81Q562E7 1941 aa10.41□□□□□ -0.74
PTCD1-201ENST00000292478 IGKV1-6A0A0C4DH72 117 aa10.41□□□□□ -0.74
PTCD1-201ENST00000292478 RNF182Q8N6D2 247 aa10.41□□□□□ -0.74
PTCD1-201ENST00000292478 COL4A6Q14031 1691 aa10.41□□□□□ -0.74
PTCD1-201ENST00000292478 RPL15P61313 204 aaKnown RBP10.41□□□□□ -0.74
PTCD1-201ENST00000292478 HSD52Q0P140 79 aa10.41□□□□□ -0.74
PTCD1-201ENST00000292478 ORAOV1Q8WV07 137 aa10.41□□□□□ -0.74
PTCD1-201ENST00000292478 E7EQL1 145 aa10.41□□□□□ -0.74
PTCD1-201ENST00000292478 TDGF1P13385 188 aa10.41□□□□□ -0.74
PTCD1-201ENST00000292478 DERL1Q9BUN8 251 aa10.41□□□□□ -0.74
PTCD1-201ENST00000292478 DPH3P1Q9H4G8 78 aa10.41□□□□□ -0.74
PTCD1-201ENST00000292478 APOMO95445 188 aa10.4□□□□□ -0.74
PTCD1-201ENST00000292478 COL8A2P25067 703 aa10.4□□□□□ -0.74
PTCD1-201ENST00000292478 ZDBF2Q9HCK1 2354 aa10.4□□□□□ -0.74
PTCD1-201ENST00000292478 LYZL1Q6UWQ5 148 aa10.4□□□□□ -0.74
PTCD1-201ENST00000292478 LYPD2Q6UXB3 125 aa10.4□□□□□ -0.74
PTCD1-201ENST00000292478 C5orf24Q7Z6I8 188 aa10.4□□□□□ -0.74
PTCD1-201ENST00000292478 ZNF329Q86UD4 541 aa10.4□□□□□ -0.74
PTCD1-201ENST00000292478 OR5A1Q8NGJ0 315 aa10.4□□□□□ -0.74
PTCD1-201ENST00000292478 RFNGQ9Y644 331 aa10.4□□□□□ -0.74
PTCD1-201ENST00000292478 PLXNA2O75051 1894 aa10.4□□□□□ -0.74
PTCD1-201ENST00000292478 RPRMLQ8N4K4 120 aa10.4□□□□□ -0.74
PTCD1-201ENST00000292478 NUP35Q8NFH5 326 aa10.4□□□□□ -0.74
PTCD1-201ENST00000292478 PPIFP30405 207 aaKnown RBP10.4□□□□□ -0.75
PTCD1-201ENST00000292478 FAM90A2PQ658T7 463 aa10.4□□□□□ -0.75
PTCD1-201ENST00000292478 SHANK2-AS3Q9BTD1 123 aa10.4□□□□□ -0.75
PTCD1-201ENST00000292478 TMEM14BQ9NUH8 114 aa10.4□□□□□ -0.75
PTCD1-201ENST00000292478 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.39□□□□□ -0.75
PTCD1-201ENST00000292478 SH2D1AO60880 128 aa10.39□□□□□ -0.75
PTCD1-201ENST00000292478 SDK2Q58EX2 2172 aa10.39□□□□□ -0.75
PTCD1-201ENST00000292478 C21orf62-AS1Q17RA5 79 aa10.39□□□□□ -0.75
PTCD1-201ENST00000292478 LCN12Q6JVE5 192 aa10.39□□□□□ -0.75
PTCD1-201ENST00000292478 K7ENP7 123 aa10.39□□□□□ -0.75
PTCD1-201ENST00000292478 CD28P10747 220 aa10.39□□□□□ -0.75
PTCD1-201ENST00000292478 GNLYP22749 145 aa10.39□□□□□ -0.75
PTCD1-201ENST00000292478 H3BUX3 64 aa10.39□□□□□ -0.75
PTCD1-201ENST00000292478 GATA3P23771 443 aa10.39□□□□□ -0.75
PTCD1-201ENST00000292478 EMP1P54849 157 aa10.39□□□□□ -0.75
PTCD1-201ENST00000292478 C1orf194Q5T5A4 169 aa10.39□□□□□ -0.75
PTCD1-201ENST00000292478 DMRTA1Q5VZB9 504 aa10.39□□□□□ -0.75
PTCD1-201ENST00000292478 DTX2Q86UW9 622 aa10.39□□□□□ -0.75
PTCD1-201ENST00000292478 TOMM7Q9P0U1 55 aa10.39□□□□□ -0.75
PTCD1-201ENST00000292478 EVI2AP22794 236 aa10.39□□□□□ -0.75
PTCD1-201ENST00000292478 CEACAM8P31997 349 aaPredicted RBP10.39□□□□□ -0.75
PTCD1-201ENST00000292478 DTX1Q86Y01 620 aa10.39□□□□□ -0.75
PTCD1-201ENST00000292478 D6R8Y8 96 aa10.38□□□□□ -0.75
PTCD1-201ENST00000292478 H3BUT2 72 aa10.38□□□□□ -0.75
PTCD1-201ENST00000292478 HOXA3O43365 443 aaPredicted RBP10.38□□□□□ -0.75
PTCD1-201ENST00000292478 UNQ6494/PRO21346Q6UXR6 183 aa10.38□□□□□ -0.75
PTCD1-201ENST00000292478 ZNF562Q6V9R5 426 aa10.38□□□□□ -0.75
PTCD1-201ENST00000292478 ZNF833PQ6ZTB9 187 aa10.38□□□□□ -0.75
PTCD1-201ENST00000292478 MRPL52Q86TS9 123 aaKnown RBP10.38□□□□□ -0.75
PTCD1-201ENST00000292478 LINC00311Q8N616 119 aa10.38□□□□□ -0.75
PTCD1-201ENST00000292478 TANC1Q9C0D5 1861 aa10.38□□□□□ -0.75
PTCD1-201ENST00000292478 TRGV4A0A0C4DH28 118 aa10.38□□□□□ -0.75
PTCD1-201ENST00000292478 NDUFB8O95169 186 aa10.38□□□□□ -0.75
PTCD1-201ENST00000292478 PLNP26678 52 aa10.38□□□□□ -0.75
PTCD1-201ENST00000292478 SRSF6Q13247 344 aaKnown RBP10.38□□□□□ -0.75
PTCD1-201ENST00000292478 PLA2G2CQ5R387 149 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms