RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 RPUSD1Q9UJJ7 312 aaKnown RBP10.87□□□□□ -0.67
SCAF4-201ENST00000286835 HSPB8Q9UJY1 196 aa10.87□□□□□ -0.67
SCAF4-201ENST00000286835 SMIM27A0A1W2PRY6 76 aa10.86□□□□□ -0.67
SCAF4-201ENST00000286835 APOHP02749 345 aaPredicted RBP10.86□□□□□ -0.67
SCAF4-201ENST00000286835 NMUP48645 174 aa10.86□□□□□ -0.67
SCAF4-201ENST00000286835 ARF6P62330 175 aa10.86□□□□□ -0.67
SCAF4-201ENST00000286835 TM4SF20Q53R12 229 aa10.86□□□□□ -0.67
SCAF4-201ENST00000286835 EXOC3-AS1Q8N2X6 119 aa10.86□□□□□ -0.67
SCAF4-201ENST00000286835 OSR1Q8TAX0 266 aaPredicted RBP10.86□□□□□ -0.67
SCAF4-201ENST00000286835 RASL11BQ9BPW5 248 aa10.86□□□□□ -0.67
SCAF4-201ENST00000286835 HIGD1AQ9Y241 93 aa10.86□□□□□ -0.67
SCAF4-201ENST00000286835 CSN1S1P47710 185 aa10.86□□□□□ -0.67
SCAF4-201ENST00000286835 DIAPH2-AS1Q14236 149 aa10.86□□□□□ -0.67
SCAF4-201ENST00000286835 C12orf54Q6X4T0 127 aa10.86□□□□□ -0.67
SCAF4-201ENST00000286835 ZNF329Q86UD4 541 aa10.86□□□□□ -0.67
SCAF4-201ENST00000286835 CACNG8Q8WXS5 425 aa10.86□□□□□ -0.67
SCAF4-201ENST00000286835 ZNF503Q96F45 646 aa10.86□□□□□ -0.67
SCAF4-201ENST00000286835 TCRBV4S1A1TA0A5B7 111 aa10.86□□□□□ -0.67
SCAF4-201ENST00000286835 HLA-DRB1P01911 266 aa10.86□□□□□ -0.67
SCAF4-201ENST00000286835 RAB1BQ9H0U4 201 aa10.86□□□□□ -0.67
SCAF4-201ENST00000286835 INSIG2Q9Y5U4 225 aa10.86□□□□□ -0.67
SCAF4-201ENST00000286835 OR2T8A6NH00 312 aa10.85□□□□□ -0.67
SCAF4-201ENST00000286835 CEACAM8P31997 349 aaPredicted RBP10.85□□□□□ -0.67
SCAF4-201ENST00000286835 MSMPQ1L6U9 139 aa10.85□□□□□ -0.67
SCAF4-201ENST00000286835 PRR30Q53SZ7 412 aaPredicted RBP10.85□□□□□ -0.67
SCAF4-201ENST00000286835 MBNL2Q5VZF2 373 aaKnown RBP10.85□□□□□ -0.67
SCAF4-201ENST00000286835 OR4F17Q8NGA8 305 aa10.85□□□□□ -0.67
SCAF4-201ENST00000286835 ORAOV1Q8WV07 137 aa10.85□□□□□ -0.67
SCAF4-201ENST00000286835 AP5S1Q9NUS5 200 aa10.85□□□□□ -0.67
SCAF4-201ENST00000286835 F11RQ9Y624 299 aaKnown RBP10.85□□□□□ -0.67
SCAF4-201ENST00000286835 PPIAL4EA0A075B759 164 aa10.85□□□□□ -0.67
SCAF4-201ENST00000286835 PPIAL4FP0DN26 164 aa10.85□□□□□ -0.67
SCAF4-201ENST00000286835 PSG1P11464 419 aa10.85□□□□□ -0.67
SCAF4-201ENST00000286835 MRPL52Q86TS9 123 aaKnown RBP10.85□□□□□ -0.67
SCAF4-201ENST00000286835 ZC2HC1AQ96GY0 325 aa10.85□□□□□ -0.67
SCAF4-201ENST00000286835 ZNF257Q9Y2Q1 563 aa10.85□□□□□ -0.67
SCAF4-201ENST00000286835 HILPDAQ9Y5L2 63 aa10.85□□□□□ -0.67
SCAF4-201ENST00000286835 GAGE10A6NGK3 116 aa10.85□□□□□ -0.67
SCAF4-201ENST00000286835 IGHV1-46P01743 117 aa10.85□□□□□ -0.67
SCAF4-201ENST00000286835 FCER1GP30273 86 aa10.85□□□□□ -0.67
SCAF4-201ENST00000286835 COMPP49747 757 aaPredicted RBP10.84□□□□□ -0.67
SCAF4-201ENST00000286835 AARDQ4LEZ3 155 aa10.84□□□□□ -0.67
SCAF4-201ENST00000286835 MRPL27Q9P0M9 148 aaKnown RBP10.84□□□□□ -0.67
SCAF4-201ENST00000286835 TET2Q6N021 2002 aaPredicted RBP10.84□□□□□ -0.67
SCAF4-201ENST00000286835 PRSS46E5RG02 174 aa10.84□□□□□ -0.67
SCAF4-201ENST00000286835 LIPFP07098 398 aa10.84□□□□□ -0.67
SCAF4-201ENST00000286835 CD40P25942 277 aa10.84□□□□□ -0.67
SCAF4-201ENST00000286835 Q6ZS92 163 aa10.84□□□□□ -0.67
SCAF4-201ENST00000286835 C5orf17Q8NAS9 161 aa10.84□□□□□ -0.67
SCAF4-201ENST00000286835 C1orf162Q8NEQ5 155 aaPredicted RBP10.84□□□□□ -0.67
SCAF4-201ENST00000286835 C1orf159Q96HA4 380 aa10.84□□□□□ -0.67
SCAF4-201ENST00000286835 TMUB1Q9BVT8 246 aa10.84□□□□□ -0.67
SCAF4-201ENST00000286835 IGHV3-35A0A0C4DH35 117 aa10.84□□□□□ -0.67
SCAF4-201ENST00000286835 BSPH1Q075Z2 132 aa10.84□□□□□ -0.67
SCAF4-201ENST00000286835 RBPMS2Q6ZRY4 209 aaKnown RBP10.84□□□□□ -0.67
SCAF4-201ENST00000286835 RPEQ96AT9 228 aa10.84□□□□□ -0.67
SCAF4-201ENST00000286835 FNDC4Q9H6D8 234 aaPredicted RBP10.84□□□□□ -0.67
SCAF4-201ENST00000286835 SYS1-DBNDD2H3BUS1 97 aa10.84□□□□□ -0.67
SCAF4-201ENST00000286835 WT1-ASQ06250 92 aa10.84□□□□□ -0.67
SCAF4-201ENST00000286835 RIGQ13278 110 aa10.84□□□□□ -0.67
SCAF4-201ENST00000286835 SMIM15Q7Z3B0 74 aa10.84□□□□□ -0.67
SCAF4-201ENST00000286835 SLC25A15Q9Y619 301 aa10.84□□□□□ -0.67
SCAF4-201ENST00000286835 E7EUB6 86 aa10.83□□□□□ -0.68
SCAF4-201ENST00000286835 ESDP10768 282 aa10.83□□□□□ -0.68
SCAF4-201ENST00000286835 GAFA1Q96PS6 74 aa10.83□□□□□ -0.68
SCAF4-201ENST00000286835 TPSG1Q9NRR2 321 aa10.83□□□□□ -0.68
SCAF4-201ENST00000286835 IGHV3OR16-8A0A075B7F1 116 aa10.83□□□□□ -0.68
SCAF4-201ENST00000286835 IGHV1-69-2A0A0G2JMI3 117 aa10.83□□□□□ -0.68
SCAF4-201ENST00000286835 RPL24P83731 157 aaKnown RBP10.83□□□□□ -0.68
SCAF4-201ENST00000286835 NDUFB8O95169 186 aa10.83□□□□□ -0.68
SCAF4-201ENST00000286835 MRPS16Q9Y3D3 137 aaKnown RBP10.83□□□□□ -0.68
SCAF4-201ENST00000286835 DDB2Q92466 427 aa10.82□□□□□ -0.68
SCAF4-201ENST00000286835 C18orf15Q96N68 181 aa10.82□□□□□ -0.68
SCAF4-201ENST00000286835 FBXL15Q9H469 300 aa10.82□□□□□ -0.68
SCAF4-201ENST00000286835 K7EM74 188 aa10.82□□□□□ -0.68
SCAF4-201ENST00000286835 FCGR2BP31994 310 aaPredicted RBP10.82□□□□□ -0.68
SCAF4-201ENST00000286835 GDF5OSQ5U4N7 250 aa10.82□□□□□ -0.68
SCAF4-201ENST00000286835 SLC25A48Q6ZT89 311 aaKnown RBP10.82□□□□□ -0.68
SCAF4-201ENST00000286835 PLSCR4Q9NRQ2 329 aa10.82□□□□□ -0.68
SCAF4-201ENST00000286835 H0YJW9 148 aa10.81□□□□□ -0.68
SCAF4-201ENST00000286835 IGLV2-8P01709 118 aa10.81□□□□□ -0.68
SCAF4-201ENST00000286835 AAMDCQ9H7C9 122 aa10.81□□□□□ -0.68
SCAF4-201ENST00000286835 ADAMTS20P59510 1910 aa10.81□□□□□ -0.68
SCAF4-201ENST00000286835 K7ERU9 68 aa10.81□□□□□ -0.68
SCAF4-201ENST00000286835 MSRB2Q9Y3D2 182 aa10.81□□□□□ -0.68
SCAF4-201ENST00000286835 LINC00312Q9Y6C7 94 aa10.81□□□□□ -0.68
SCAF4-201ENST00000286835 IGHV2-26A0A0B4J1V2 119 aa10.81□□□□□ -0.68
SCAF4-201ENST00000286835 A0A1B0GUT8 65 aa10.81□□□□□ -0.68
SCAF4-201ENST00000286835 IGHV1-24A0A0C4DH33 117 aa10.8□□□□□ -0.68
SCAF4-201ENST00000286835 ZNF474Q6S9Z5 364 aaPredicted RBP10.8□□□□□ -0.68
SCAF4-201ENST00000286835 PNKDQ8N490 385 aa10.8□□□□□ -0.68
SCAF4-201ENST00000286835 IGF2BP2-AS1Q96M15 143 aa10.8□□□□□ -0.68
SCAF4-201ENST00000286835 GPR183P32249 361 aa10.8□□□□□ -0.68
SCAF4-201ENST00000286835 OR10AG1Q8NH19 301 aa10.8□□□□□ -0.68
SCAF4-201ENST00000286835 MRPL36Q9P0J6 103 aaKnown RBP10.8□□□□□ -0.68
SCAF4-201ENST00000286835 A0A1W2PPI3 338 aa10.8□□□□□ -0.68
SCAF4-201ENST00000286835 TCRAP04437 139 aa10.8□□□□□ -0.68
SCAF4-201ENST00000286835 PRSS1P07477 247 aa10.8□□□□□ -0.68
SCAF4-201ENST00000286835 RIPPLY3P57055 190 aa10.8□□□□□ -0.68
SCAF4-201ENST00000286835 FAM167A-AS1Q96KT0 104 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms