RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 C1orf43Q9BWL3 253 aa10.95□□□□□ -0.66
SMARCA5-201ENST00000283131 MBNL3Q9NUK0 354 aaKnown RBP10.95□□□□□ -0.66
SMARCA5-201ENST00000283131 DKK4Q9UBT3 224 aa10.95□□□□□ -0.66
SMARCA5-201ENST00000283131 A0A0G2JK05 382 aa10.95□□□□□ -0.66
SMARCA5-201ENST00000283131 A0A087X0K7 114 aa10.95□□□□□ -0.66
SMARCA5-201ENST00000283131 SUPT4H1P63272 117 aaKnown RBP10.95□□□□□ -0.66
SMARCA5-201ENST00000283131 ZNF124Q15973 351 aa10.95□□□□□ -0.66
SMARCA5-201ENST00000283131 KIR3DS1Q14943 382 aa10.94□□□□□ -0.66
SMARCA5-201ENST00000283131 ADAMTSL5Q6ZMM2 481 aa10.94□□□□□ -0.66
SMARCA5-201ENST00000283131 DMRTC2Q8IXT2 367 aaPredicted RBP10.94□□□□□ -0.66
SMARCA5-201ENST00000283131 LIME1Q9H400 295 aa10.94□□□□□ -0.66
SMARCA5-201ENST00000283131 A0A0G2JMM0 328 aa10.94□□□□□ -0.66
SMARCA5-201ENST00000283131 A0A1W2PPB8 328 aa10.94□□□□□ -0.66
SMARCA5-201ENST00000283131 KIR3DP1A8MWS1 328 aa10.94□□□□□ -0.66
SMARCA5-201ENST00000283131 IFITM1P13164 125 aa10.94□□□□□ -0.66
SMARCA5-201ENST00000283131 EFNB3Q15768 340 aa10.94□□□□□ -0.66
SMARCA5-201ENST00000283131 PSG3Q16557 428 aa10.94□□□□□ -0.66
SMARCA5-201ENST00000283131 TMEM219Q86XT9 240 aa10.94□□□□□ -0.66
SMARCA5-201ENST00000283131 TM2D1Q9BX74 207 aa10.94□□□□□ -0.66
SMARCA5-201ENST00000283131 PSPNO60542 156 aa10.94□□□□□ -0.66
SMARCA5-201ENST00000283131 TRBV20-1A0A075B6N2 111 aa10.94□□□□□ -0.66
SMARCA5-201ENST00000283131 C9orf139Q6ZV77 190 aa10.94□□□□□ -0.66
SMARCA5-201ENST00000283131 OCC1Q8TAD7 63 aa10.94□□□□□ -0.66
SMARCA5-201ENST00000283131 ACACAQ13085 2346 aa10.94□□□□□ -0.66
SMARCA5-201ENST00000283131 C14orf178Q8N769 122 aaPredicted RBP10.94□□□□□ -0.66
SMARCA5-201ENST00000283131 SLC25A39Q9BZJ4 359 aaPredicted RBP10.94□□□□□ -0.66
SMARCA5-201ENST00000283131 MORN2Q502X0 79 aa10.93□□□□□ -0.66
SMARCA5-201ENST00000283131 FOCADQ5VW36 1801 aa10.93□□□□□ -0.66
SMARCA5-201ENST00000283131 USMG5Q96IX5 58 aa10.93□□□□□ -0.66
SMARCA5-201ENST00000283131 PSG7Q13046 419 aa10.93□□□□□ -0.66
SMARCA5-201ENST00000283131 TMEM158Q8WZ71 300 aa10.93□□□□□ -0.66
SMARCA5-201ENST00000283131 SPANXCQ9NY87 97 aa10.93□□□□□ -0.66
SMARCA5-201ENST00000283131 TCF15Q12870 199 aa10.93□□□□□ -0.66
SMARCA5-201ENST00000283131 TRPT1Q86TN4 253 aaKnown RBP10.93□□□□□ -0.66
SMARCA5-201ENST00000283131 WFDC9Q8NEX5 89 aa10.93□□□□□ -0.66
SMARCA5-201ENST00000283131 KLRD1Q13241 179 aa10.92□□□□□ -0.66
SMARCA5-201ENST00000283131 LYZL1Q6UWQ5 148 aa10.92□□□□□ -0.66
SMARCA5-201ENST00000283131 SLC22A18ASQ8N1D0 253 aa10.92□□□□□ -0.66
SMARCA5-201ENST00000283131 SAP25Q8TEE9 199 aa10.92□□□□□ -0.66
SMARCA5-201ENST00000283131 KIF13BQ9NQT8 1826 aa10.92□□□□□ -0.66
SMARCA5-201ENST00000283131 APOC4P55056 127 aa10.92□□□□□ -0.66
SMARCA5-201ENST00000283131 NABP1Q96AH0 204 aa10.92□□□□□ -0.66
SMARCA5-201ENST00000283131 GAGE12BA1L429 117 aa10.92□□□□□ -0.66
SMARCA5-201ENST00000283131 CEACAM1P13688 526 aa10.92□□□□□ -0.66
SMARCA5-201ENST00000283131 EXOC3-AS1Q8N2X6 119 aa10.92□□□□□ -0.66
SMARCA5-201ENST00000283131 GVINP1Q7Z2Y8 2422 aa10.92□□□□□ -0.66
SMARCA5-201ENST00000283131 LCN12Q6JVE5 192 aa10.92□□□□□ -0.66
SMARCA5-201ENST00000283131 LIMS2Q7Z4I7 341 aa10.92□□□□□ -0.66
SMARCA5-201ENST00000283131 SLC25A45Q8N413 288 aa10.92□□□□□ -0.66
SMARCA5-201ENST00000283131 FOXG1P55316 489 aaPredicted RBP10.92□□□□□ -0.66
SMARCA5-201ENST00000283131 ITGB4P16144 1822 aa10.92□□□□□ -0.66
SMARCA5-201ENST00000283131 A6NNC1 897 aa10.91□□□□□ -0.66
SMARCA5-201ENST00000283131 NDUFB1O75438 58 aa10.91□□□□□ -0.66
SMARCA5-201ENST00000283131 DEPPQ9NTK1 212 aa10.91□□□□□ -0.66
SMARCA5-201ENST00000283131 USP54Q70EL1 1684 aa10.91□□□□□ -0.66
SMARCA5-201ENST00000283131 A0A087WWL8 130 aa10.91□□□□□ -0.66
SMARCA5-201ENST00000283131 CD55P08174 381 aa10.91□□□□□ -0.66
SMARCA5-201ENST00000283131 DEFB105AQ8NG35 78 aa10.91□□□□□ -0.66
SMARCA5-201ENST00000283131 AMBPP02760 352 aa10.91□□□□□ -0.66
SMARCA5-201ENST00000283131 IGHV1-2P23083 117 aa10.91□□□□□ -0.66
SMARCA5-201ENST00000283131 SHANK1Q9Y566 2161 aa10.91□□□□□ -0.66
SMARCA5-201ENST00000283131 C1QL4Q86Z23 238 aa10.91□□□□□ -0.66
SMARCA5-201ENST00000283131 TMEM256Q8N2U0 113 aa10.91□□□□□ -0.66
SMARCA5-201ENST00000283131 C14orf132Q9NPU4 83 aa10.91□□□□□ -0.66
SMARCA5-201ENST00000283131 ERVH48-1M5A8F1 160 aa10.91□□□□□ -0.66
SMARCA5-201ENST00000283131 VWC2Q2TAL6 325 aa10.91□□□□□ -0.66
SMARCA5-201ENST00000283131 hDV102S1A0JD36 115 aa10.9□□□□□ -0.66
SMARCA5-201ENST00000283131 NDPQ00604 133 aa10.9□□□□□ -0.66
SMARCA5-201ENST00000283131 VMO1Q7Z5L0 202 aa10.9□□□□□ -0.66
SMARCA5-201ENST00000283131 RAMP3O60896 148 aa10.9□□□□□ -0.66
SMARCA5-201ENST00000283131 IGFBP3P17936 291 aaPredicted RBP10.9□□□□□ -0.66
SMARCA5-201ENST00000283131 MORN5Q5VZ52 161 aa10.9□□□□□ -0.66
SMARCA5-201ENST00000283131 FAM181AQ8N9Y4 354 aa10.9□□□□□ -0.66
SMARCA5-201ENST00000283131 ABCA3Q99758 1704 aa10.9□□□□□ -0.66
SMARCA5-201ENST00000283131 B4DSR2 109 aa10.9□□□□□ -0.66
SMARCA5-201ENST00000283131 C5orf67F2Z3F1 127 aa10.9□□□□□ -0.66
SMARCA5-201ENST00000283131 RHODO00212 210 aa10.9□□□□□ -0.66
SMARCA5-201ENST00000283131 DOCK3Q8IZD9 2030 aa10.9□□□□□ -0.66
SMARCA5-201ENST00000283131 ZNF319Q9P2F9 582 aa10.9□□□□□ -0.66
SMARCA5-201ENST00000283131 RPUSD1Q9UJJ7 312 aaKnown RBP10.9□□□□□ -0.66
SMARCA5-201ENST00000283131 PLXNB2O15031 1838 aa10.9□□□□□ -0.66
SMARCA5-201ENST00000283131 TRAV13-2A0A0B4J235 113 aa10.9□□□□□ -0.67
SMARCA5-201ENST00000283131 COLQQ9Y215 455 aaPredicted RBP10.9□□□□□ -0.67
SMARCA5-201ENST00000283131 MSRB2Q9Y3D2 182 aa10.9□□□□□ -0.67
SMARCA5-201ENST00000283131 SH2D1AO60880 128 aa10.9□□□□□ -0.67
SMARCA5-201ENST00000283131 MINOS1Q5TGZ0 78 aa10.9□□□□□ -0.67
SMARCA5-201ENST00000283131 C1QTNF5Q9BXJ0 243 aa10.9□□□□□ -0.67
SMARCA5-201ENST00000283131 MINOS1-NBL1R4GNA1 71 aa10.9□□□□□ -0.67
SMARCA5-201ENST00000283131 FUSP35637 526 aaKnown RBP eCLIP10.89□□□□□ -0.67
SMARCA5-201ENST00000283131 ID3Q02535 119 aa10.89□□□□□ -0.67
SMARCA5-201ENST00000283131 PRSS29PA6NIE9 313 aa10.89□□□□□ -0.67
SMARCA5-201ENST00000283131 CFHR3Q02985 330 aa10.89□□□□□ -0.67
SMARCA5-201ENST00000283131 POU2AF1Q16633 256 aa10.89□□□□□ -0.67
SMARCA5-201ENST00000283131 RREB1Q92766 1687 aa10.89□□□□□ -0.67
SMARCA5-201ENST00000283131 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.89□□□□□ -0.67
SMARCA5-201ENST00000283131 FAM223BA6NKX1 122 aa10.89□□□□□ -0.67
SMARCA5-201ENST00000283131 H3BUX3 64 aa10.89□□□□□ -0.67
SMARCA5-201ENST00000283131 NXPH4O95158 308 aa10.89□□□□□ -0.67
SMARCA5-201ENST00000283131 TBX6O95947 436 aaPredicted RBP10.89□□□□□ -0.67
SMARCA5-201ENST00000283131 GATA4P43694 442 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms