RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 ICAM4Q14773 271 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 COX19Q49B96 90 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 ZNF324BQ6AW86 544 aaPredicted RBP2.33□□□□□ -2.04
HERC4-201ENST00000277817 OR4A47Q6IF82 309 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 PIFOQ8TCI5 191 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 BET1LQ9NYM9 111 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 SPRR3Q9UBC9 169 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 UFC1Q9Y3C8 167 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 TEX50A0A1B0GTY4 177 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 ZNF729A6NN14 1252 aaPredicted RBP2.33□□□□□ -2.04
HERC4-201ENST00000277817 CD5P06127 495 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 NPSP0C0P6 89 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 DDTP30046 118 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 SRIP30626 198 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 LINC00205P59089 165 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 SELENOTP62341 195 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 PAFAH1B2P68402 229 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 GCSAMLQ5JQS6 135 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 ZNF497Q6ZNH5 498 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 SSX8Q7RTT4 187 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 GATAD1Q8WUU5 269 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 PGLYRP4Q96LB8 373 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 IMMP2LQ96T52 175 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 TXNDC17Q9BRA2 123 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 OVOL2Q9BRP0 275 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 SDF2L1Q9HCN8 221 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 CADP27708 2225 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 COLCA2A8K830 154 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 A8MWL6 223 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 IQCF6A8MYZ5 107 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 MOSP00540 346 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 NHLRC4P0CG21 123 aaPredicted RBP2.33□□□□□ -2.04
HERC4-201ENST00000277817 GPR6P46095 362 aaPredicted RBP2.33□□□□□ -2.04
HERC4-201ENST00000277817 ZNF146Q15072 292 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 WDR82Q6UXN9 313 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 ZNF788Q6ZQV5 615 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 ATOH7Q8N100 152 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 MUC15Q8N387 334 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 LRTM2Q8N967 370 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 OR8A1Q8NGG7 326 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 OR4A5Q8NH83 315 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 OR9G1Q8NH87 305 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 SFXN3Q9BWM7 321 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 TMEM191AQ9H0A3 160 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 ZNF430Q9H8G1 570 aaPredicted RBP2.33□□□□□ -2.04
HERC4-201ENST00000277817 GOLT1BQ9Y3E0 138 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 S4R3C0 116 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 FAT2Q9NYQ8 4349 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 IGKV3D-15A0A087WSY6 115 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.32□□□□□ -2.04
HERC4-201ENST00000277817 IGHV1-69-2A0A0G2JMI3 117 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 SCO2A0A1W2PP80 73 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 GCGP01275 180 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 CCL3L1P16619 93 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 BSPH1Q075Z2 132 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 MORN2Q502X0 79 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 CENPWQ5EE01 88 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 CYP2G1PQ6ZSU1 146 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 MIR17HGQ75NE6 70 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 LINC00305Q7Z4B0 112 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 PNKDQ8N490 385 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 C11orf52Q96A22 123 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 URB1-AS1Q96HZ7 61 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 KRTAP4-8Q9BYQ9 185 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 RALYQ9UKM9 306 aaKnown RBP2.32□□□□□ -2.04
HERC4-201ENST00000277817 IGHV3OR16-13A0A075B7E8 117 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 IGHV3-74A0A0B4J1X5 117 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 LINC00587B1AMM8 73 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.32□□□□□ -2.04
HERC4-201ENST00000277817 CORTO00230 105 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 VENTXO95231 258 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 NAPSAO96009 420 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 SOD3P08294 240 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 RNF224P0DH78 156 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 HOXA5P20719 270 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 FOXA3P55318 350 aaPredicted RBP2.32□□□□□ -2.04
HERC4-201ENST00000277817 RPL23P62829 140 aaKnown RBP2.32□□□□□ -2.04
HERC4-201ENST00000277817 RPL30P62888 115 aaKnown RBP2.32□□□□□ -2.04
HERC4-201ENST00000277817 TWIST1Q15672 202 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 PAPPA-AS1Q5QFB9 102 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 ZNF575Q86XF7 245 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 BPIFA4PQ86YQ2 179 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 LINC01561Q8N1V8 128 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 GBGT1Q8N5D6 347 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 SRSF12Q8WXF0 261 aaKnown RBP2.32□□□□□ -2.04
HERC4-201ENST00000277817 GTF3AQ92664 365 aaKnown RBP2.32□□□□□ -2.04
HERC4-201ENST00000277817 TUBA4BQ9H853 241 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 CBLN4Q9NTU7 201 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 TMEM106BQ9NUM4 274 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 TSSC4Q9Y5U2 329 aaPredicted RBP2.32□□□□□ -2.04
HERC4-201ENST00000277817 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.32□□□□□ -2.04
HERC4-201ENST00000277817 DOCK10Q96BY6 2186 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 IGHV3OR16-8A0A075B7F1 116 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 SAA2-SAA4A0A096LPE2 208 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 IGHV1-18A0A0C4DH31 117 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 C9JQL5 133 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 LYNX1G3V0Z9 82 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 SNAI2O43623 268 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 IGKV1-5P01602 117 aa2.32□□□□□ -2.04
HERC4-201ENST00000277817 MT-ND6P03923 174 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms