RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 ECSCRQ19T08 205 aa7.5□□□□□ -1.21
TRIM55-201ENST00000276573 CDC42EP3Q9UKI2 254 aa7.5□□□□□ -1.21
TRIM55-201ENST00000276573 ABCA2Q9BZC7 2435 aa7.5□□□□□ -1.21
TRIM55-201ENST00000276573 TRBV9A0A0B4J1U6 114 aa7.5□□□□□ -1.21
TRIM55-201ENST00000276573 G3V318 75 aa7.5□□□□□ -1.21
TRIM55-201ENST00000276573 PHOX2AO14813 284 aa7.5□□□□□ -1.21
TRIM55-201ENST00000276573 SLC25A5P05141 298 aaKnown RBP7.5□□□□□ -1.21
TRIM55-201ENST00000276573 LINC01356Q8N9X3 169 aa7.5□□□□□ -1.21
TRIM55-201ENST00000276573 ZNF586Q9NXT0 402 aa7.5□□□□□ -1.21
TRIM55-201ENST00000276573 ZNF462Q96JM2 2506 aa7.49□□□□□ -1.21
TRIM55-201ENST00000276573 ABCA1O95477 2261 aa7.49□□□□□ -1.21
TRIM55-201ENST00000276573 OR2T8A6NH00 312 aa7.49□□□□□ -1.21
TRIM55-201ENST00000276573 ZNF98A6NK75 572 aa7.49□□□□□ -1.21
TRIM55-201ENST00000276573 PPP5D1E7EU14 171 aa7.49□□□□□ -1.21
TRIM55-201ENST00000276573 H3BTX0 84 aa7.49□□□□□ -1.21
TRIM55-201ENST00000276573 UBE2CO00762 179 aa7.49□□□□□ -1.21
TRIM55-201ENST00000276573 TYMSP04818 313 aa7.49□□□□□ -1.21
TRIM55-201ENST00000276573 KRTAP10-9P60411 292 aa7.49□□□□□ -1.21
TRIM55-201ENST00000276573 ERVFC1-1P60608 527 aa7.49□□□□□ -1.21
TRIM55-201ENST00000276573 GNG5P63218 68 aa7.49□□□□□ -1.21
TRIM55-201ENST00000276573 USF2Q15853 346 aaPredicted RBP7.49□□□□□ -1.21
TRIM55-201ENST00000276573 S100A7AQ86SG5 101 aa7.49□□□□□ -1.21
TRIM55-201ENST00000276573 BPIFA4PQ86YQ2 179 aa7.49□□□□□ -1.21
TRIM55-201ENST00000276573 BCL6BQ8N143 479 aaPredicted RBP7.49□□□□□ -1.21
TRIM55-201ENST00000276573 FRZBQ92765 325 aa7.49□□□□□ -1.21
TRIM55-201ENST00000276573 BTF3L4Q96K17 158 aa7.49□□□□□ -1.21
TRIM55-201ENST00000276573 Q9H3A6 140 aa7.49□□□□□ -1.21
TRIM55-201ENST00000276573 OSTCQ9NRP0 149 aa7.49□□□□□ -1.21
TRIM55-201ENST00000276573 IL36BQ9NZH7 164 aa7.49□□□□□ -1.21
TRIM55-201ENST00000276573 RNF24Q9Y225 148 aa7.49□□□□□ -1.21
TRIM55-201ENST00000276573 ASH1LQ9NR48 2969 aaKnown RBP7.48□□□□□ -1.21
TRIM55-201ENST00000276573 TRAV34A0A0B4J273 112 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 A6NDX4 124 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 SLC17A3O00476 420 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 ISLRO14498 428 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 HIST1H2BKO60814 126 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 SCGB2A1O75556 95 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 HIST1H2BJP06899 126 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 TRGC1P0CF51 173 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 HIST1H2BOP23527 126 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 HIST1H2BBP33778 126 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 CRIP2P52943 208 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-201ENST00000276573 NDUFA6P56556 154 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 HIST1H2BDP58876 126 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 HIST1H2BCP62807 126 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 RHOGP84095 191 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 FABP9Q0Z7S8 132 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 HIST2H2BEQ16778 126 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 TMEM183BQ1AE95 376 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-201ENST00000276573 BAGE2Q86Y30 109 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 C5orf17Q8NAS9 161 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 ZNF502Q8TBZ5 544 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 HIST1H2BHQ93079 126 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 HIST1H2BNQ99877 126 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 HIST1H2BMQ99879 126 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 CHRDL1Q9BU40 450 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 KLF12Q9Y4X4 402 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 V9GYV3 84 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 ZFYVE26Q68DK2 2539 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 UBR5O95071 2799 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-201ENST00000276573 ZNF320A2RRD8 509 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 MRPS12O15235 138 aaKnown RBP7.48□□□□□ -1.21
TRIM55-201ENST00000276573 S100A9P06702 114 aaKnown RBP7.48□□□□□ -1.21
TRIM55-201ENST00000276573 MGST1P10620 155 aaKnown RBP7.48□□□□□ -1.21
TRIM55-201ENST00000276573 ADMP35318 185 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 AKR1D1P51857 326 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 LY6EQ16553 131 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 C15orf32Q32M92 178 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 C19orf54Q5BKX5 351 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 OR4F17Q8NGA8 305 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 OTORQ9NRC9 128 aa7.48□□□□□ -1.21
TRIM55-201ENST00000276573 COL12A1Q99715 3063 aa7.47□□□□□ -1.21
TRIM55-201ENST00000276573 MYO18BQ8IUG5 2567 aa7.47□□□□□ -1.21
TRIM55-201ENST00000276573 TRBV19A0A075B6N1 114 aa7.47□□□□□ -1.21
TRIM55-201ENST00000276573 TRAV41A0A0B4J266 112 aa7.47□□□□□ -1.21
TRIM55-201ENST00000276573 H3BUX3 64 aa7.47□□□□□ -1.21
TRIM55-201ENST00000276573 CLEC3BP05452 202 aa7.47□□□□□ -1.21
TRIM55-201ENST00000276573 IGLC2P0DOY2 106 aa7.47□□□□□ -1.21
TRIM55-201ENST00000276573 HOXA5P20719 270 aa7.47□□□□□ -1.21
TRIM55-201ENST00000276573 LOXL1Q08397 574 aaPredicted RBP7.47□□□□□ -1.21
TRIM55-201ENST00000276573 C17orf77Q96MU5 243 aa7.47□□□□□ -1.21
TRIM55-201ENST00000276573 MS4A10Q96PG2 267 aa7.47□□□□□ -1.21
TRIM55-201ENST00000276573 ATG101Q9BSB4 218 aa7.47□□□□□ -1.21
TRIM55-201ENST00000276573 RNASE7Q9H1E1 156 aaKnown RBP7.47□□□□□ -1.21
TRIM55-201ENST00000276573 BEX4Q9NWD9 120 aaPredicted RBP7.47□□□□□ -1.21
TRIM55-201ENST00000276573 UTP20O75691 2785 aaKnown RBP7.47□□□□□ -1.21
TRIM55-201ENST00000276573 TRAV9-1A0A075B6T8 112 aa7.46□□□□□ -1.21
TRIM55-201ENST00000276573 J3QLI3 93 aa7.46□□□□□ -1.21
TRIM55-201ENST00000276573 TCRAP04437 139 aa7.46□□□□□ -1.21
TRIM55-201ENST00000276573 UBE2G1P62253 170 aa7.46□□□□□ -1.21
TRIM55-201ENST00000276573 RPEL1Q2QD12 228 aa7.46□□□□□ -1.21
TRIM55-201ENST00000276573 DEFB113Q30KQ7 82 aa7.46□□□□□ -1.21
TRIM55-201ENST00000276573 C9orf152Q5JTZ5 239 aa7.46□□□□□ -1.21
TRIM55-201ENST00000276573 LINC00518Q8N0U6 118 aa7.46□□□□□ -1.21
TRIM55-201ENST00000276573 LYPD1Q8N2G4 141 aa7.46□□□□□ -1.21
TRIM55-201ENST00000276573 ZNF414Q96IQ9 312 aa7.46□□□□□ -1.21
TRIM55-201ENST00000276573 GAR1Q9NY12 217 aaKnown RBP7.46□□□□□ -1.21
TRIM55-201ENST00000276573 SPG11Q96JI7 2443 aa7.46□□□□□ -1.22
TRIM55-201ENST00000276573 TRBV7-1A0A0A6YYK4 115 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms