RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 ZADH2Q8N4Q0 377 aa10.59□□□□□ -0.71
NUP54-201ENST00000264883 CD177Q8N6Q3 437 aa10.59□□□□□ -0.71
NUP54-201ENST00000264883 OR8A1Q8NGG7 326 aa10.59□□□□□ -0.71
NUP54-201ENST00000264883 SGK494Q96LW2 274 aa10.59□□□□□ -0.71
NUP54-201ENST00000264883 METRNQ9UJH8 293 aa10.59□□□□□ -0.71
NUP54-201ENST00000264883 PRNDQ9UKY0 176 aa10.59□□□□□ -0.71
NUP54-201ENST00000264883 CACNA1DQ01668 2161 aa10.58□□□□□ -0.72
NUP54-201ENST00000264883 CELSR3Q9NYQ7 3312 aa10.58□□□□□ -0.72
NUP54-201ENST00000264883 P01737 135 aa10.58□□□□□ -0.72
NUP54-201ENST00000264883 TFF1P04155 84 aa10.58□□□□□ -0.72
NUP54-201ENST00000264883 CFHR2P36980 270 aa10.58□□□□□ -0.72
NUP54-201ENST00000264883 RPL39P5Q59GN2 51 aa10.58□□□□□ -0.72
NUP54-201ENST00000264883 CT83Q5H943 113 aa10.58□□□□□ -0.72
NUP54-201ENST00000264883 ATP1A1-AS1Q5TC04 95 aa10.58□□□□□ -0.72
NUP54-201ENST00000264883 GCSAMQ8N6F7 178 aa10.58□□□□□ -0.72
NUP54-201ENST00000264883 OR9G1Q8NH87 305 aa10.58□□□□□ -0.72
NUP54-201ENST00000264883 PAXXQ9BUH6 204 aa10.58□□□□□ -0.72
NUP54-201ENST00000264883 PRSS22Q9GZN4 317 aa10.58□□□□□ -0.72
NUP54-201ENST00000264883 MYOD1P15172 320 aa10.58□□□□□ -0.72
NUP54-201ENST00000264883 LOXL3P58215 753 aa10.58□□□□□ -0.72
NUP54-201ENST00000264883 EDDM3AQ14507 147 aa10.58□□□□□ -0.72
NUP54-201ENST00000264883 TM4SF20Q53R12 229 aa10.58□□□□□ -0.72
NUP54-201ENST00000264883 LINC00322Q6ZN03 302 aaPredicted RBP10.58□□□□□ -0.72
NUP54-201ENST00000264883 PIP4P2Q8N4L2 257 aa10.58□□□□□ -0.72
NUP54-201ENST00000264883 SPRR3Q9UBC9 169 aa10.58□□□□□ -0.72
NUP54-201ENST00000264883 F8W1H4 67 aa10.57□□□□□ -0.72
NUP54-201ENST00000264883 WFDC2Q14508 124 aa10.57□□□□□ -0.72
NUP54-201ENST00000264883 TMEM30BQ3MIR4 351 aa10.57□□□□□ -0.72
NUP54-201ENST00000264883 TMEM177Q53S58 311 aa10.57□□□□□ -0.72
NUP54-201ENST00000264883 GFRA4Q9GZZ7 299 aa10.57□□□□□ -0.72
NUP54-201ENST00000264883 PTPRZ1P23471 2315 aaPredicted RBP10.57□□□□□ -0.72
NUP54-201ENST00000264883 SRRM5B3KS81 715 aa10.57□□□□□ -0.72
NUP54-201ENST00000264883 LYZL6O75951 148 aa10.57□□□□□ -0.72
NUP54-201ENST00000264883 PRSS3P2Q8NHM4 247 aa10.57□□□□□ -0.72
NUP54-201ENST00000264883 GPR82Q96P67 336 aa10.57□□□□□ -0.72
NUP54-201ENST00000264883 SPAG8Q99932 426 aaPredicted RBP10.57□□□□□ -0.72
NUP54-201ENST00000264883 DCTN5Q9BTE1 182 aa10.57□□□□□ -0.72
NUP54-201ENST00000264883 F11RQ9Y624 299 aaKnown RBP10.57□□□□□ -0.72
NUP54-201ENST00000264883 A6NJY4 79 aa10.56□□□□□ -0.72
NUP54-201ENST00000264883 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.56□□□□□ -0.72
NUP54-201ENST00000264883 NMUP48645 174 aa10.56□□□□□ -0.72
NUP54-201ENST00000264883 HOXA4Q00056 320 aaPredicted RBP10.56□□□□□ -0.72
NUP54-201ENST00000264883 SRSF6Q13247 344 aaKnown RBP10.56□□□□□ -0.72
NUP54-201ENST00000264883 LGALS9BQ3B8N2 356 aa10.56□□□□□ -0.72
NUP54-201ENST00000264883 LGALS9CQ6DKI2 356 aa10.56□□□□□ -0.72
NUP54-201ENST00000264883 MTURNQ8N3F0 131 aa10.56□□□□□ -0.72
NUP54-201ENST00000264883 TMEM178AQ8NBL3 297 aa10.56□□□□□ -0.72
NUP54-201ENST00000264883 DEFB127Q9H1M4 99 aa10.56□□□□□ -0.72
NUP54-201ENST00000264883 WT1P19544 449 aaPredicted RBP10.55□□□□□ -0.72
NUP54-201ENST00000264883 GCSHP23434 173 aa10.55□□□□□ -0.72
NUP54-201ENST00000264883 PRCDQ00LT1 54 aa10.55□□□□□ -0.72
NUP54-201ENST00000264883 MLANAQ16655 118 aa10.55□□□□□ -0.72
NUP54-201ENST00000264883 PCP2Q8IVA1 136 aa10.55□□□□□ -0.72
NUP54-201ENST00000264883 DAZAP1Q96EP5 407 aaKnown RBP10.55□□□□□ -0.72
NUP54-201ENST00000264883 CALYQ9NYX4 217 aa10.55□□□□□ -0.72
NUP54-201ENST00000264883 EPDR1Q9UM22 224 aa10.55□□□□□ -0.72
NUP54-201ENST00000264883 ASPMQ8IZT6 3477 aa10.55□□□□□ -0.72
NUP54-201ENST00000264883 C19orf71A6NCJ1 209 aa10.55□□□□□ -0.72
NUP54-201ENST00000264883 HAX1O00165 279 aa10.55□□□□□ -0.72
NUP54-201ENST00000264883 COX7A2P2O60397 106 aa10.55□□□□□ -0.72
NUP54-201ENST00000264883 MOSP00540 346 aa10.55□□□□□ -0.72
NUP54-201ENST00000264883 SLC25A5P05141 298 aaKnown RBP10.55□□□□□ -0.72
NUP54-201ENST00000264883 C2orf83Q53S99 150 aa10.55□□□□□ -0.72
NUP54-201ENST00000264883 MLST8Q9BVC4 326 aa10.55□□□□□ -0.72
NUP54-201ENST00000264883 SIGLEC8Q9NYZ4 499 aa10.55□□□□□ -0.72
NUP54-201ENST00000264883 ZNF492Q9P255 531 aa10.55□□□□□ -0.72
NUP54-201ENST00000264883 AKAP13Q12802 2813 aa10.55□□□□□ -0.72
NUP54-201ENST00000264883 IGKV1D-17A0A075B6S4 117 aa10.54□□□□□ -0.72
NUP54-201ENST00000264883 SRRM4A7MD48 611 aaKnown RBP10.54□□□□□ -0.72
NUP54-201ENST00000264883 NKX2-8O15522 239 aa10.54□□□□□ -0.72
NUP54-201ENST00000264883 IGHV3-13P01766 116 aa10.54□□□□□ -0.72
NUP54-201ENST00000264883 CACNG7P62955 275 aa10.54□□□□□ -0.72
NUP54-201ENST00000264883 RPRMLQ8N4K4 120 aa10.54□□□□□ -0.72
NUP54-201ENST00000264883 C18orf15Q96N68 181 aa10.54□□□□□ -0.72
NUP54-201ENST00000264883 SERTM2A0A1B0GWG4 89 aa10.54□□□□□ -0.72
NUP54-201ENST00000264883 A0A1W2PRD5 423 aa10.54□□□□□ -0.72
NUP54-201ENST00000264883 A0A1W2PRF3 423 aa10.54□□□□□ -0.72
NUP54-201ENST00000264883 A0A1W2PRM7 423 aa10.54□□□□□ -0.72
NUP54-201ENST00000264883 IGLV1-44P01699 117 aa10.54□□□□□ -0.72
NUP54-201ENST00000264883 FXYD2P54710 66 aa10.54□□□□□ -0.72
NUP54-201ENST00000264883 C10orf113Q5VZT2 155 aa10.54□□□□□ -0.72
NUP54-201ENST00000264883 SH2D6Q7Z4S9 175 aa10.54□□□□□ -0.72
NUP54-201ENST00000264883 BCL6BQ8N143 479 aaPredicted RBP10.54□□□□□ -0.72
NUP54-201ENST00000264883 OR1L8Q8NGR8 309 aa10.54□□□□□ -0.72
NUP54-201ENST00000264883 FXYD5Q96DB9 178 aa10.54□□□□□ -0.72
NUP54-201ENST00000264883 MRPL16Q9NX20 251 aaKnown RBP10.54□□□□□ -0.72
NUP54-201ENST00000264883 KLF12Q9Y4X4 402 aa10.54□□□□□ -0.72
NUP54-201ENST00000264883 ZFHX4Q86UP3 3567 aa10.53□□□□□ -0.72
NUP54-201ENST00000264883 KBTBD11-OT1A0A1B0GTJ5 212 aa10.53□□□□□ -0.72
NUP54-201ENST00000264883 K7ERJ3 54 aa10.53□□□□□ -0.72
NUP54-201ENST00000264883 CGB3P0DN86 165 aa10.53□□□□□ -0.72
NUP54-201ENST00000264883 CGB7P0DN87 165 aa10.53□□□□□ -0.72
NUP54-201ENST00000264883 MYCNOSP40205 109 aa10.53□□□□□ -0.72
NUP54-201ENST00000264883 ZNF134P52741 427 aa10.53□□□□□ -0.72
NUP54-201ENST00000264883 ETDBQ3ZM63 59 aa10.53□□□□□ -0.72
NUP54-201ENST00000264883 FAM169BQ8N8A8 192 aa10.53□□□□□ -0.72
NUP54-201ENST00000264883 ITLN1Q8WWA0 313 aa10.53□□□□□ -0.72
NUP54-201ENST00000264883 CACNG8Q8WXS5 425 aa10.53□□□□□ -0.72
NUP54-201ENST00000264883 ZNF714Q96N38 554 aa10.53□□□□□ -0.72
NUP54-201ENST00000264883 C5orf64Q2M2E5 130 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms