RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 TMEM178BH3BS89 294 aa7.31□□□□□ -1.24
MSH4-201ENST00000263187 THBDP07204 575 aa7.31□□□□□ -1.24
MSH4-201ENST00000263187 SUB1P53999 127 aaKnown RBP eCLIP7.31□□□□□ -1.24
MSH4-201ENST00000263187 ARL2-SNX15V9GYD0 113 aa7.31□□□□□ -1.24
MSH4-201ENST00000263187 TMSB15BA0A087X1C1 80 aa7.31□□□□□ -1.24
MSH4-201ENST00000263187 SNAI2O43623 268 aa7.31□□□□□ -1.24
MSH4-201ENST00000263187 GOLT1AQ6ZVE7 132 aa7.31□□□□□ -1.24
MSH4-201ENST00000263187 FAM169BQ8N8A8 192 aa7.31□□□□□ -1.24
MSH4-201ENST00000263187 OR1L4Q8NGR5 311 aa7.31□□□□□ -1.24
MSH4-201ENST00000263187 GTSF1Q8WW33 167 aa7.31□□□□□ -1.24
MSH4-201ENST00000263187 CACNG8Q8WXS5 425 aa7.31□□□□□ -1.24
MSH4-201ENST00000263187 GRAMD2BQ96HH9 432 aa7.31□□□□□ -1.24
MSH4-201ENST00000263187 NCOR2Q9Y618 2525 aa7.31□□□□□ -1.24
MSH4-201ENST00000263187 PTPRQQ9UMZ3 2332 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 hDV102S1A0JD36 115 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 LOXP28300 417 aaPredicted RBP7.3□□□□□ -1.24
MSH4-201ENST00000263187 VMA21Q3ZAQ7 101 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 TEX36Q5VZQ5 186 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 SSX8Q7RTT4 187 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 TMEM167AQ8TBQ9 72 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 DAZAP1Q96EP5 407 aaKnown RBP7.3□□□□□ -1.24
MSH4-201ENST00000263187 ABHD17AQ96GS6 310 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 ALKBH7Q9BT30 221 aaPredicted RBP7.3□□□□□ -1.24
MSH4-201ENST00000263187 MRPL32Q9BYC8 188 aaKnown RBP7.3□□□□□ -1.24
MSH4-201ENST00000263187 Q9H3A6 140 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 LAMTOR2Q9Y2Q5 125 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 PRSS47A8MTI9 375 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 M0QZK8 103 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 P01737 135 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 IGLL1P15814 213 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 CTRLP40313 264 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 FXYD7P58549 80 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 COL5A1-AS1Q5SY13 56 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 MBD6Q96DN6 1003 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 CHODLQ9H9P2 273 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 UQCR10Q9UDW1 63 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 IGHV3-35A0A0C4DH35 117 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 IGLC7A0M8Q6 106 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 NDUFB8O95169 186 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 FSTL3O95633 263 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 HIST1H1EP10412 219 aaKnown RBP7.3□□□□□ -1.24
MSH4-201ENST00000263187 RPL27AP46776 148 aaKnown RBP7.3□□□□□ -1.24
MSH4-201ENST00000263187 Q6ZS92 163 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 BCL6BQ8N143 479 aaPredicted RBP7.3□□□□□ -1.24
MSH4-201ENST00000263187 HILPDAQ9Y5L2 63 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 INSIG2Q9Y5U4 225 aa7.3□□□□□ -1.24
MSH4-201ENST00000263187 HRNRQ86YZ3 2850 aaPredicted RBP7.29□□□□□ -1.24
MSH4-201ENST00000263187 FNDC10F2Z333 226 aa7.29□□□□□ -1.24
MSH4-201ENST00000263187 PRRG2O14669 202 aa7.29□□□□□ -1.24
MSH4-201ENST00000263187 CNIH1O95406 144 aa7.29□□□□□ -1.24
MSH4-201ENST00000263187 IGHV3-23P01764 117 aa7.29□□□□□ -1.24
MSH4-201ENST00000263187 IGHV1-8P0DP01 117 aa7.29□□□□□ -1.24
MSH4-201ENST00000263187 PSG1P11464 419 aa7.29□□□□□ -1.24
MSH4-201ENST00000263187 GFRALQ6UXV0 394 aa7.29□□□□□ -1.24
MSH4-201ENST00000263187 PERPQ96FX8 193 aa7.29□□□□□ -1.24
MSH4-201ENST00000263187 C19orf24Q9BVV8 132 aa7.29□□□□□ -1.24
MSH4-201ENST00000263187 COL8A1P27658 744 aa7.29□□□□□ -1.24
MSH4-201ENST00000263187 MRGPRG-AS1Q2M3A8 158 aa7.29□□□□□ -1.24
MSH4-201ENST00000263187 VSTM2AQ8TAG5 236 aa7.29□□□□□ -1.24
MSH4-201ENST00000263187 LINC01560Q8TB33 94 aa7.29□□□□□ -1.24
MSH4-201ENST00000263187 FAM57AQ8TBR7 257 aa7.29□□□□□ -1.24
MSH4-201ENST00000263187 URB1-AS1Q96HZ7 61 aa7.29□□□□□ -1.24
MSH4-201ENST00000263187 CEACAM8P31997 349 aaPredicted RBP7.28□□□□□ -1.24
MSH4-201ENST00000263187 PNKDQ8N490 385 aa7.28□□□□□ -1.24
MSH4-201ENST00000263187 RNASE6Q93091 150 aaKnown RBP7.28□□□□□ -1.24
MSH4-201ENST00000263187 GPR82Q96P67 336 aa7.28□□□□□ -1.24
MSH4-201ENST00000263187 SPTBN4Q9H254 2564 aa7.28□□□□□ -1.24
MSH4-201ENST00000263187 M0R3E3 92 aa7.28□□□□□ -1.24
MSH4-201ENST00000263187 CHEK1O14757 476 aa7.28□□□□□ -1.24
MSH4-201ENST00000263187 TSPOP30536 169 aa7.28□□□□□ -1.24
MSH4-201ENST00000263187 CA7P43166 264 aa7.28□□□□□ -1.24
MSH4-201ENST00000263187 TMEM186Q96B77 213 aa7.28□□□□□ -1.24
MSH4-201ENST00000263187 ZC2HC1AQ96GY0 325 aa7.28□□□□□ -1.24
MSH4-201ENST00000263187 RPP21Q9H633 154 aaKnown RBP7.28□□□□□ -1.24
MSH4-201ENST00000263187 LINC00574Q9H8X3 128 aa7.28□□□□□ -1.24
MSH4-201ENST00000263187 E7EQL1 145 aa7.28□□□□□ -1.24
MSH4-201ENST00000263187 BTF3P20290 206 aaKnown RBP7.28□□□□□ -1.24
MSH4-201ENST00000263187 MEF2CQ06413 473 aaPredicted RBP7.28□□□□□ -1.24
MSH4-201ENST00000263187 ONECUT1Q9UBC0 465 aa7.28□□□□□ -1.24
MSH4-201ENST00000263187 LOC389332A0A1B0GUA5 103 aa7.27□□□□□ -1.25
MSH4-201ENST00000263187 CEACAM4O75871 244 aa7.27□□□□□ -1.25
MSH4-201ENST00000263187 TCRAP04437 139 aa7.27□□□□□ -1.25
MSH4-201ENST00000263187 GRNP28799 593 aaKnown RBP7.27□□□□□ -1.25
MSH4-201ENST00000263187 HBBP68871 147 aa7.27□□□□□ -1.25
MSH4-201ENST00000263187 IGFL4Q6B9Z1 124 aa7.27□□□□□ -1.25
MSH4-201ENST00000263187 SRSF12Q8WXF0 261 aaKnown RBP7.27□□□□□ -1.25
MSH4-201ENST00000263187 C22orf15Q8WYQ4 148 aa7.27□□□□□ -1.25
MSH4-201ENST00000263187 OR4C46A6NHA9 309 aa7.27□□□□□ -1.25
MSH4-201ENST00000263187 CRYABP02511 175 aaKnown RBP7.27□□□□□ -1.25
MSH4-201ENST00000263187 TMEM133Q9H2Q1 129 aa7.27□□□□□ -1.25
MSH4-201ENST00000263187 NCOR1P1Q9H4R4 102 aa7.27□□□□□ -1.25
MSH4-201ENST00000263187 IGHV2-26A0A0B4J1V2 119 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 IGHV1-69-2A0A0G2JMI3 117 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 C2orf70A6NJV1 201 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 PTTG1IPP53801 180 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 HES1Q14469 280 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 C7orf69Q9H7B7 122 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 HIGD1AQ9Y241 93 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 SIGLEC9Q9Y336 463 aa7.26□□□□□ -1.25
MSH4-201ENST00000263187 CUBNO60494 3623 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms