RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 ZDHHC16Q969W1 377 aa6.92□□□□□ -1.3
LDB3-201ENST00000263066 SCRT2Q9NQ03 307 aa6.92□□□□□ -1.3
LDB3-201ENST00000263066 CHCHD2Q9Y6H1 151 aaPredicted RBP6.92□□□□□ -1.3
LDB3-201ENST00000263066 TRBV20OR9-2A0A075B6H5 130 aa6.92□□□□□ -1.3
LDB3-201ENST00000263066 A0A1W2PRD5 423 aa6.92□□□□□ -1.3
LDB3-201ENST00000263066 A0A1W2PRF3 423 aa6.92□□□□□ -1.3
LDB3-201ENST00000263066 A0A1W2PRM7 423 aa6.92□□□□□ -1.3
LDB3-201ENST00000263066 TMEM262E9PQX1 116 aa6.92□□□□□ -1.3
LDB3-201ENST00000263066 H7C2G1 150 aa6.92□□□□□ -1.3
LDB3-201ENST00000263066 SCGB1D4Q6XE38 83 aa6.92□□□□□ -1.3
LDB3-201ENST00000263066 CENPVQ7Z7K6 275 aaPredicted RBP6.92□□□□□ -1.3
LDB3-201ENST00000263066 RPRMLQ8N4K4 120 aa6.92□□□□□ -1.3
LDB3-201ENST00000263066 ZZEF1O43149 2961 aa6.92□□□□□ -1.3
LDB3-201ENST00000263066 AKAP13Q12802 2813 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 SAA2-SAA4A0A096LPE2 208 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 IGKV1D-43A0A0B4J1Z2 117 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 UCNP55089 124 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 LYRM7Q5U5X0 104 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 Q6ZUT4 128 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 PIP4P1Q86T03 277 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 TTC9CQ8N5M4 171 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 NFAM1Q8NET5 270 aaPredicted RBP6.91□□□□□ -1.3
LDB3-201ENST00000263066 OR1L1Q8NH94 360 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 OR13C6PQ8NH95 151 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 FOXB1Q99853 325 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 NABP2Q9BQ15 211 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 TMUB1Q9BVT8 246 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 RAB9BQ9NP90 201 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 SPANXB1Q9NS25 103 aaPredicted RBP6.91□□□□□ -1.3
LDB3-201ENST00000263066 HIVEP2P31629 2446 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 CCDC179H3BU77 68 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 P01737 135 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 UBE2L3P68036 154 aaKnown RBP6.91□□□□□ -1.3
LDB3-201ENST00000263066 HBBP68871 147 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 FAM27E3Q08E93 113 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 FHL5Q5TD97 284 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 TMEM211Q6ICI0 200 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 RASL11AQ6T310 242 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 LINC00114Q6XXX2 140 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 Q6ZRM9 215 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 IGHV1-24A0A0C4DH33 117 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 SPRY3O43610 288 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 ZNF32P17041 273 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 FAM159AQ6UWV7 190 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 OXGR1Q96P68 337 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 PPDPFQ9H3Y8 114 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 TMEM167BQ9NRX6 74 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 LRP4O75096 1905 aa6.91□□□□□ -1.3
LDB3-201ENST00000263066 FABP5P3A8MUU1 101 aa6.9□□□□□ -1.3
LDB3-201ENST00000263066 ZNF837Q96EG3 531 aaPredicted RBP6.9□□□□□ -1.3
LDB3-201ENST00000263066 SRXN1Q9BYN0 137 aa6.9□□□□□ -1.3
LDB3-201ENST00000263066 OSTCQ9NRP0 149 aa6.9□□□□□ -1.3
LDB3-201ENST00000263066 TNFRSF18Q9Y5U5 241 aa6.9□□□□□ -1.3
LDB3-201ENST00000263066 TMEM131Q92545 1883 aa6.9□□□□□ -1.3
LDB3-201ENST00000263066 K7EN84 100 aa6.9□□□□□ -1.3
LDB3-201ENST00000263066 CEACAM4O75871 244 aa6.9□□□□□ -1.3
LDB3-201ENST00000263066 DECR2Q9NUI1 292 aa6.9□□□□□ -1.3
LDB3-201ENST00000263066 V9GYV3 84 aa6.9□□□□□ -1.3
LDB3-201ENST00000263066 hADV38S2A0JD32 116 aa6.9□□□□□ -1.31
LDB3-201ENST00000263066 C2orf70A6NJV1 201 aa6.9□□□□□ -1.31
LDB3-201ENST00000263066 TSPAN13O95857 204 aa6.9□□□□□ -1.31
LDB3-201ENST00000263066 PSG7Q13046 419 aa6.9□□□□□ -1.31
LDB3-201ENST00000263066 H1FXQ92522 213 aaKnown RBP6.9□□□□□ -1.31
LDB3-201ENST00000263066 SPATA25Q9BR10 227 aa6.9□□□□□ -1.31
LDB3-201ENST00000263066 ZNF256Q9Y2P7 627 aaPredicted RBP6.9□□□□□ -1.31
LDB3-201ENST00000263066 IGHV3-13P01766 116 aa6.89□□□□□ -1.31
LDB3-201ENST00000263066 SLC25A5P05141 298 aaKnown RBP6.89□□□□□ -1.31
LDB3-201ENST00000263066 FOXG1P55316 489 aaPredicted RBP6.89□□□□□ -1.31
LDB3-201ENST00000263066 EDDM3AQ14507 147 aa6.89□□□□□ -1.31
LDB3-201ENST00000263066 ZNF585BQ52M93 769 aa6.89□□□□□ -1.31
LDB3-201ENST00000263066 PCP2Q8IVA1 136 aa6.89□□□□□ -1.31
LDB3-201ENST00000263066 C1orf162Q8NEQ5 155 aaPredicted RBP6.89□□□□□ -1.31
LDB3-201ENST00000263066 C1RLQ9NZP8 487 aa6.89□□□□□ -1.31
LDB3-201ENST00000263066 LIPT2A6NK58 231 aa6.89□□□□□ -1.31
LDB3-201ENST00000263066 FNDC10F2Z333 226 aa6.89□□□□□ -1.31
LDB3-201ENST00000263066 OR2J3O76001 311 aa6.89□□□□□ -1.31
LDB3-201ENST00000263066 COL8A1P27658 744 aa6.89□□□□□ -1.31
LDB3-201ENST00000263066 ZCCHC24Q8N2G6 241 aaKnown RBP6.89□□□□□ -1.31
LDB3-201ENST00000263066 RAX2Q96IS3 184 aa6.89□□□□□ -1.31
LDB3-201ENST00000263066 SLC25A33Q9BSK2 321 aa6.89□□□□□ -1.31
LDB3-201ENST00000263066 A8MWV9 139 aa6.89□□□□□ -1.31
LDB3-201ENST00000263066 GNLYP22749 145 aa6.89□□□□□ -1.31
LDB3-201ENST00000263066 C9orf153Q5TBE3 101 aa6.89□□□□□ -1.31
LDB3-201ENST00000263066 KLF12Q9Y4X4 402 aa6.89□□□□□ -1.31
LDB3-201ENST00000263066 CSMD1Q96PZ7 3565 aa6.89□□□□□ -1.31
LDB3-201ENST00000263066 ARFGEF3Q5TH69 2177 aa6.89□□□□□ -1.31
LDB3-201ENST00000263066 FXYD2P54710 66 aa6.88□□□□□ -1.31
LDB3-201ENST00000263066 XGP55808 180 aa6.88□□□□□ -1.31
LDB3-201ENST00000263066 FOXI1Q12951 378 aa6.88□□□□□ -1.31
LDB3-201ENST00000263066 KLRD1Q13241 179 aa6.88□□□□□ -1.31
LDB3-201ENST00000263066 PTH2Q96A98 100 aa6.88□□□□□ -1.31
LDB3-201ENST00000263066 CHCHD1Q96BP2 118 aaKnown RBP6.88□□□□□ -1.31
LDB3-201ENST00000263066 C1orf147Q96MC9 270 aaPredicted RBP6.88□□□□□ -1.31
LDB3-201ENST00000263066 MPC1Q9Y5U8 109 aa6.88□□□□□ -1.31
LDB3-201ENST00000263066 IGLV3-12A0A075B6K2 115 aa6.88□□□□□ -1.31
LDB3-201ENST00000263066 FCN3O75636 299 aa6.88□□□□□ -1.31
LDB3-201ENST00000263066 FOXF2Q12947 444 aa6.88□□□□□ -1.31
LDB3-201ENST00000263066 NUP35Q8NFH5 326 aa6.88□□□□□ -1.31
LDB3-201ENST00000263066 KIR2DL4Q99706 377 aa6.88□□□□□ -1.31
LDB3-201ENST00000263066 CHAC1Q9BUX1 264 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms