RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 CGB3P0DN86 165 aa10.64□□□□□ -0.71
TTC39A-202ENST00000262676 RHOGP84095 191 aa10.64□□□□□ -0.71
TTC39A-202ENST00000262676 PVRIGQ6DKI7 326 aa10.64□□□□□ -0.71
TTC39A-202ENST00000262676 SIGLEC15Q6ZMC9 328 aa10.64□□□□□ -0.71
TTC39A-202ENST00000262676 C6orf226Q5I0X4 101 aa10.64□□□□□ -0.71
TTC39A-202ENST00000262676 WFDC1Q9HC57 220 aa10.64□□□□□ -0.71
TTC39A-202ENST00000262676 Q0VFX4 171 aa10.64□□□□□ -0.71
TTC39A-202ENST00000262676 ZIC4Q8N9L1 334 aa10.64□□□□□ -0.71
TTC39A-202ENST00000262676 DOCK6Q96HP0 2047 aa10.64□□□□□ -0.71
TTC39A-202ENST00000262676 TRAV40A0A0B4J280 105 aa10.64□□□□□ -0.71
TTC39A-202ENST00000262676 A0A0G2JK05 382 aa10.63□□□□□ -0.71
TTC39A-202ENST00000262676 TIMP3P35625 211 aa10.63□□□□□ -0.71
TTC39A-202ENST00000262676 EFNB3Q15768 340 aa10.63□□□□□ -0.71
TTC39A-202ENST00000262676 TEX38Q6PEX7 206 aa10.63□□□□□ -0.71
TTC39A-202ENST00000262676 GAGE12BA1L429 117 aa10.63□□□□□ -0.71
TTC39A-202ENST00000262676 THBDP07204 575 aa10.63□□□□□ -0.71
TTC39A-202ENST00000262676 CGB7P0DN87 165 aa10.63□□□□□ -0.71
TTC39A-202ENST00000262676 UBE2V1Q13404 147 aa10.63□□□□□ -0.71
TTC39A-202ENST00000262676 TCF15Q12870 199 aa10.63□□□□□ -0.71
TTC39A-202ENST00000262676 DOPEY2Q9Y3R5 2298 aa10.63□□□□□ -0.71
TTC39A-202ENST00000262676 C15orf61A6NNL5 157 aa10.63□□□□□ -0.71
TTC39A-202ENST00000262676 CMC4P56277 68 aaPredicted RBP10.63□□□□□ -0.71
TTC39A-202ENST00000262676 KLF17Q5JT82 389 aaPredicted RBP10.63□□□□□ -0.71
TTC39A-202ENST00000262676 PLPPR1Q8TBJ4 325 aa10.63□□□□□ -0.71
TTC39A-202ENST00000262676 OVOL2Q9BRP0 275 aa10.63□□□□□ -0.71
TTC39A-202ENST00000262676 LINC00527Q9UJ94 153 aa10.63□□□□□ -0.71
TTC39A-202ENST00000262676 IGHV2OR16-5A0A0B4J2B6 119 aa10.63□□□□□ -0.71
TTC39A-202ENST00000262676 SHISA3A0PJX4 238 aa10.63□□□□□ -0.71
TTC39A-202ENST00000262676 MLNRO43193 412 aa10.62□□□□□ -0.71
TTC39A-202ENST00000262676 LYZL1Q6UWQ5 148 aa10.62□□□□□ -0.71
TTC39A-202ENST00000262676 TUBGCP6Q96RT7 1819 aa10.62□□□□□ -0.71
TTC39A-202ENST00000262676 RPL15P61313 204 aaKnown RBP10.62□□□□□ -0.71
TTC39A-202ENST00000262676 ERCC8Q13216 396 aa10.62□□□□□ -0.71
TTC39A-202ENST00000262676 SPXQ9BT56 116 aa10.62□□□□□ -0.71
TTC39A-202ENST00000262676 ZNF319Q9P2F9 582 aa10.62□□□□□ -0.71
TTC39A-202ENST00000262676 IGKV1D-43A0A0B4J1Z2 117 aa10.62□□□□□ -0.71
TTC39A-202ENST00000262676 RNF223E7ERA6 249 aa10.62□□□□□ -0.71
TTC39A-202ENST00000262676 OR9G9P0C7N8 305 aa10.62□□□□□ -0.71
TTC39A-202ENST00000262676 SMIM10L1P0DMW3 83 aa10.62□□□□□ -0.71
TTC39A-202ENST00000262676 C1orf194Q5T5A4 169 aa10.62□□□□□ -0.71
TTC39A-202ENST00000262676 SMIM10Q96HG1 83 aa10.62□□□□□ -0.71
TTC39A-202ENST00000262676 TRAV13-1A0A0B4J241 112 aa10.62□□□□□ -0.71
TTC39A-202ENST00000262676 IGKV1D-13A0A0B4J2D9 117 aa10.62□□□□□ -0.71
TTC39A-202ENST00000262676 TGFBR3LH3BV60 316 aa10.62□□□□□ -0.71
TTC39A-202ENST00000262676 IGKV1-13P0DP09 117 aa10.62□□□□□ -0.71
TTC39A-202ENST00000262676 EXOC3-AS1Q8N2X6 119 aa10.62□□□□□ -0.71
TTC39A-202ENST00000262676 MTCL1Q9Y4B5 1905 aaKnown RBP10.62□□□□□ -0.71
TTC39A-202ENST00000262676 TRGV1A0A0A0MS02 117 aa10.61□□□□□ -0.71
TTC39A-202ENST00000262676 SNHG12Q9BXW3 62 aa10.61□□□□□ -0.71
TTC39A-202ENST00000262676 H3BMM0 161 aa10.61□□□□□ -0.71
TTC39A-202ENST00000262676 RPL35AP18077 110 aaKnown RBP10.61□□□□□ -0.71
TTC39A-202ENST00000262676 SPATA31B1PQ5VZV4 182 aa10.61□□□□□ -0.71
TTC39A-202ENST00000262676 UBE2WQ96B02 151 aa10.61□□□□□ -0.71
TTC39A-202ENST00000262676 CSTL1Q9H114 145 aa10.61□□□□□ -0.71
TTC39A-202ENST00000262676 TRACP01848 142 aa10.61□□□□□ -0.71
TTC39A-202ENST00000262676 CRIPAKQ8N1N5 446 aa10.61□□□□□ -0.71
TTC39A-202ENST00000262676 BMPERQ8N8U9 685 aa10.61□□□□□ -0.71
TTC39A-202ENST00000262676 C1orf159Q96HA4 380 aa10.61□□□□□ -0.71
TTC39A-202ENST00000262676 SMKR1H3BMG3 65 aa10.61□□□□□ -0.71
TTC39A-202ENST00000262676 C5orf47Q569G3 176 aa10.61□□□□□ -0.71
TTC39A-202ENST00000262676 RBBP6Q7Z6E9 1792 aaKnown RBP10.61□□□□□ -0.71
TTC39A-202ENST00000262676 K7ENP7 123 aa10.6□□□□□ -0.71
TTC39A-202ENST00000262676 LINC00312Q9Y6C7 94 aa10.6□□□□□ -0.71
TTC39A-202ENST00000262676 LOC285556D6RIA3 1793 aa10.6□□□□□ -0.71
TTC39A-202ENST00000262676 OVOL1O14753 267 aa10.6□□□□□ -0.71
TTC39A-202ENST00000262676 CD5LO43866 347 aa10.6□□□□□ -0.71
TTC39A-202ENST00000262676 LY6HO94772 140 aa10.6□□□□□ -0.71
TTC39A-202ENST00000262676 PAX8Q06710 450 aa10.6□□□□□ -0.71
TTC39A-202ENST00000262676 TMEM256Q8N2U0 113 aa10.6□□□□□ -0.71
TTC39A-202ENST00000262676 TMEM158Q8WZ71 300 aa10.6□□□□□ -0.71
TTC39A-202ENST00000262676 ESPL1Q14674 2120 aa10.6□□□□□ -0.71
TTC39A-202ENST00000262676 ZNF138P52744 262 aa10.6□□□□□ -0.71
TTC39A-202ENST00000262676 CHAC1Q9BUX1 264 aa10.6□□□□□ -0.71
TTC39A-202ENST00000262676 RNF114Q9Y508 228 aa10.6□□□□□ -0.71
TTC39A-202ENST00000262676 SPTAN1Q13813 2472 aaKnown RBP10.6□□□□□ -0.71
TTC39A-202ENST00000262676 ZSWIM8A7E2V4 1837 aa10.6□□□□□ -0.71
TTC39A-202ENST00000262676 CLPSL1A2RUU4 121 aa10.6□□□□□ -0.71
TTC39A-202ENST00000262676 TCTEX1D4Q5JR98 221 aa10.6□□□□□ -0.71
TTC39A-202ENST00000262676 SOCS3O14543 225 aa10.59□□□□□ -0.71
TTC39A-202ENST00000262676 E9PQ18 207 aa10.59□□□□□ -0.71
TTC39A-202ENST00000262676 TIMM21Q9BVV7 248 aa10.59□□□□□ -0.71
TTC39A-202ENST00000262676 TRAV12-1A0A0B4J245 112 aa10.59□□□□□ -0.71
TTC39A-202ENST00000262676 Q96MF0 132 aa10.59□□□□□ -0.71
TTC39A-202ENST00000262676 PATJQ8NI35 1801 aa10.59□□□□□ -0.71
TTC39A-202ENST00000262676 MYMXA0A1B0GTQ4 84 aa10.59□□□□□ -0.71
TTC39A-202ENST00000262676 PMS2P5A8MQ11 134 aa10.59□□□□□ -0.71
TTC39A-202ENST00000262676 TMEM126AQ9H061 195 aa10.59□□□□□ -0.71
TTC39A-202ENST00000262676 A0A0G2JNJ9 132 aa10.59□□□□□ -0.71
TTC39A-202ENST00000262676 PRIMA1Q86XR5 153 aa10.59□□□□□ -0.71
TTC39A-202ENST00000262676 ZNF837Q96EG3 531 aaPredicted RBP10.59□□□□□ -0.71
TTC39A-202ENST00000262676 Q9UFV3 132 aa10.59□□□□□ -0.71
TTC39A-202ENST00000262676 TRAV25A0A0B4J276 109 aa10.58□□□□□ -0.72
TTC39A-202ENST00000262676 SH2D1AO60880 128 aa10.58□□□□□ -0.72
TTC39A-202ENST00000262676 SBF1O95248 1867 aa10.58□□□□□ -0.72
TTC39A-202ENST00000262676 C17orf100A8MU93 164 aa10.58□□□□□ -0.72
TTC39A-202ENST00000262676 C3orf79P0CE67 100 aa10.58□□□□□ -0.72
TTC39A-202ENST00000262676 RPL36AP83881 106 aaKnown RBP10.58□□□□□ -0.72
TTC39A-202ENST00000262676 PSG7Q13046 419 aa10.58□□□□□ -0.72
TTC39A-202ENST00000262676 HAPLN4Q86UW8 402 aa10.58□□□□□ -0.72
TTC39A-202ENST00000262676 RPL36ALQ969Q0 106 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms