RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 SPATA12Q7Z6I5 190 aa11.64□□□□□ -0.55
FOXF1-201ENST00000262426 FLYWCH2Q96CP2 140 aaKnown RBP11.64□□□□□ -0.55
FOXF1-201ENST00000262426 TIMD4Q96H15 378 aa11.64□□□□□ -0.55
FOXF1-201ENST00000262426 SSMEM1Q8WWF3 244 aa11.64□□□□□ -0.55
FOXF1-201ENST00000262426 KCNS1Q96KK3 526 aa11.64□□□□□ -0.55
FOXF1-201ENST00000262426 K7EN84 100 aa11.63□□□□□ -0.55
FOXF1-201ENST00000262426 ZFP36P26651 326 aaKnown RBP11.63□□□□□ -0.55
FOXF1-201ENST00000262426 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.63□□□□□ -0.55
FOXF1-201ENST00000262426 HELZ2Q9BYK8 2649 aaKnown RBP11.63□□□□□ -0.55
FOXF1-201ENST00000262426 CORTO00230 105 aa11.63□□□□□ -0.55
FOXF1-201ENST00000262426 ARL14EPLP0DKL9 152 aa11.63□□□□□ -0.55
FOXF1-201ENST00000262426 VDAC2P45880 294 aaPredicted RBP11.63□□□□□ -0.55
FOXF1-201ENST00000262426 LGALS4P56470 323 aa11.63□□□□□ -0.55
FOXF1-201ENST00000262426 TNXAQ16473 311 aa11.63□□□□□ -0.55
FOXF1-201ENST00000262426 THYN1Q9P016 225 aa11.63□□□□□ -0.55
FOXF1-201ENST00000262426 ACTL6BO94805 426 aa11.63□□□□□ -0.55
FOXF1-201ENST00000262426 CAMPP49913 170 aa11.63□□□□□ -0.55
FOXF1-201ENST00000262426 CENPVQ7Z7K6 275 aaPredicted RBP11.63□□□□□ -0.55
FOXF1-201ENST00000262426 OR1B1Q8NGR6 318 aa11.63□□□□□ -0.55
FOXF1-201ENST00000262426 OR2T6Q8NHC8 308 aa11.63□□□□□ -0.55
FOXF1-201ENST00000262426 SVIPQ8NHG7 77 aa11.63□□□□□ -0.55
FOXF1-201ENST00000262426 TSKUQ8WUA8 353 aa11.63□□□□□ -0.55
FOXF1-201ENST00000262426 CSPG4Q6UVK1 2322 aa11.62□□□□□ -0.55
FOXF1-201ENST00000262426 SAMD13Q5VXD3 122 aa11.62□□□□□ -0.55
FOXF1-201ENST00000262426 LINC00173Q6ZV60 143 aa11.62□□□□□ -0.55
FOXF1-201ENST00000262426 BPESC1Q9GZL8 116 aa11.62□□□□□ -0.55
FOXF1-201ENST00000262426 NBPF19A0A087WUL8 3843 aa11.62□□□□□ -0.55
FOXF1-201ENST00000262426 TEX50A0A1B0GTY4 177 aa11.62□□□□□ -0.55
FOXF1-201ENST00000262426 TOX4O94842 621 aa11.62□□□□□ -0.55
FOXF1-201ENST00000262426 PRB4P10163 310 aaPredicted RBP11.62□□□□□ -0.55
FOXF1-201ENST00000262426 HSPE1P61604 102 aaKnown RBP11.62□□□□□ -0.55
FOXF1-201ENST00000262426 Q8N7P7 452 aa11.62□□□□□ -0.55
FOXF1-201ENST00000262426 TMEM116Q8NCL8 245 aa11.62□□□□□ -0.55
FOXF1-201ENST00000262426 OR4F17Q8NGA8 305 aa11.62□□□□□ -0.55
FOXF1-201ENST00000262426 SMIM12Q96EX1 92 aa11.62□□□□□ -0.55
FOXF1-201ENST00000262426 ADTRPQ96IZ2 230 aa11.62□□□□□ -0.55
FOXF1-201ENST00000262426 TMEM14BQ9NUH8 114 aa11.62□□□□□ -0.55
FOXF1-201ENST00000262426 GAGE10A6NGK3 116 aa11.61□□□□□ -0.55
FOXF1-201ENST00000262426 NPY1RP25929 384 aa11.61□□□□□ -0.55
FOXF1-201ENST00000262426 KIR2DS2P43631 304 aa11.61□□□□□ -0.55
FOXF1-201ENST00000262426 RPEL1Q2QD12 228 aa11.61□□□□□ -0.55
FOXF1-201ENST00000262426 EBLN2Q6P2I7 272 aa11.61□□□□□ -0.55
FOXF1-201ENST00000262426 OR5AN1Q8NGI8 311 aa11.61□□□□□ -0.55
FOXF1-201ENST00000262426 TM4SF20Q53R12 229 aa11.61□□□□□ -0.55
FOXF1-201ENST00000262426 DTX2Q86UW9 622 aa11.61□□□□□ -0.55
FOXF1-201ENST00000262426 PSMG3Q9BT73 122 aaPredicted RBP11.61□□□□□ -0.55
FOXF1-201ENST00000262426 CHODLQ9H9P2 273 aa11.61□□□□□ -0.55
FOXF1-201ENST00000262426 INSIG2Q9Y5U4 225 aa11.61□□□□□ -0.55
FOXF1-201ENST00000262426 TMEM8BA6NDV4 472 aa11.61□□□□□ -0.55
FOXF1-201ENST00000262426 UPK2O00526 184 aa11.61□□□□□ -0.55
FOXF1-201ENST00000262426 FOXA3P55318 350 aaPredicted RBP11.61□□□□□ -0.55
FOXF1-201ENST00000262426 FOXL1Q12952 345 aa11.61□□□□□ -0.55
FOXF1-201ENST00000262426 TMEM186Q96B77 213 aa11.61□□□□□ -0.55
FOXF1-201ENST00000262426 ENY2Q9NPA8 101 aa11.61□□□□□ -0.55
FOXF1-201ENST00000262426 CD1BP29016 333 aa11.6□□□□□ -0.55
FOXF1-201ENST00000262426 YPEL3P61236 119 aaPredicted RBP11.6□□□□□ -0.55
FOXF1-201ENST00000262426 RPL8P62917 257 aaKnown RBP11.6□□□□□ -0.55
FOXF1-201ENST00000262426 LSM4Q9Y4Z0 139 aaKnown RBP11.6□□□□□ -0.55
FOXF1-201ENST00000262426 IGHV3-21A0A0B4J1V1 117 aa11.6□□□□□ -0.55
FOXF1-201ENST00000262426 TMEM147Q9BVK8 224 aa11.6□□□□□ -0.55
FOXF1-201ENST00000262426 NPCDR1Q9BY65 106 aa11.6□□□□□ -0.55
FOXF1-201ENST00000262426 VENTXO95231 258 aa11.6□□□□□ -0.55
FOXF1-201ENST00000262426 NEU4Q8WWR8 484 aaPredicted RBP11.6□□□□□ -0.55
FOXF1-201ENST00000262426 AP1S3Q96PC3 154 aa11.6□□□□□ -0.55
FOXF1-201ENST00000262426 COMMD5Q9GZQ3 224 aa11.6□□□□□ -0.55
FOXF1-201ENST00000262426 BUB1B-PAK6H3BSN5 160 aa11.59□□□□□ -0.55
FOXF1-201ENST00000262426 IGLV1-47P01700 117 aa11.59□□□□□ -0.55
FOXF1-201ENST00000262426 LIPFP07098 398 aa11.59□□□□□ -0.55
FOXF1-201ENST00000262426 OR4P4Q8NGL7 312 aa11.59□□□□□ -0.55
FOXF1-201ENST00000262426 OR4C13Q8NGP0 309 aa11.59□□□□□ -0.55
FOXF1-201ENST00000262426 RPEQ96AT9 228 aa11.59□□□□□ -0.55
FOXF1-201ENST00000262426 PLEKHA3Q9HB20 300 aa11.59□□□□□ -0.55
FOXF1-201ENST00000262426 IL36BQ9NZH7 164 aa11.59□□□□□ -0.55
FOXF1-201ENST00000262426 FER1L6-AS1Q8NA97 138 aa11.59□□□□□ -0.55
FOXF1-201ENST00000262426 SGK494Q96LW2 274 aa11.59□□□□□ -0.55
FOXF1-201ENST00000262426 TRAV9-2A0A087WT02 112 aa11.59□□□□□ -0.55
FOXF1-201ENST00000262426 OR4C46A6NHA9 309 aa11.59□□□□□ -0.55
FOXF1-201ENST00000262426 H3BUT2 72 aa11.59□□□□□ -0.55
FOXF1-201ENST00000262426 COL8A1P27658 744 aa11.59□□□□□ -0.55
FOXF1-201ENST00000262426 SPATA31B1PQ5VZV4 182 aa11.59□□□□□ -0.55
FOXF1-201ENST00000262426 MIC13Q5XKP0 118 aa11.59□□□□□ -0.55
FOXF1-201ENST00000262426 HCP5Q6MZN7 132 aa11.59□□□□□ -0.55
FOXF1-201ENST00000262426 TREML4Q6UXN2 200 aa11.59□□□□□ -0.55
FOXF1-201ENST00000262426 TNFRSF14Q92956 283 aa11.59□□□□□ -0.55
FOXF1-201ENST00000262426 FOXA2Q9Y261 457 aaPredicted RBP11.59□□□□□ -0.55
FOXF1-201ENST00000262426 ANKRD17O75179 2603 aaKnown RBP11.58□□□□□ -0.56
FOXF1-201ENST00000262426 BMPR1BO00238 502 aa11.58□□□□□ -0.56
FOXF1-201ENST00000262426 PQLC2Q6ZP29 291 aa11.58□□□□□ -0.56
FOXF1-201ENST00000262426 MRPS16Q9Y3D3 137 aaKnown RBP11.58□□□□□ -0.56
FOXF1-201ENST00000262426 YTHDF2Q9Y5A9 579 aaKnown RBP11.58□□□□□ -0.56
FOXF1-201ENST00000262426 IGHV1-3A0A0C4DH29 117 aa11.58□□□□□ -0.56
FOXF1-201ENST00000262426 FAM231BA6NCW3 169 aa11.58□□□□□ -0.56
FOXF1-201ENST00000262426 FOXH1O75593 365 aa11.58□□□□□ -0.56
FOXF1-201ENST00000262426 SLAQ13239 276 aa11.58□□□□□ -0.56
FOXF1-201ENST00000262426 BVES-AS1Q5T3Y7 98 aa11.58□□□□□ -0.56
FOXF1-201ENST00000262426 IGHV3OR16-10A0A075B7F0 116 aa11.57□□□□□ -0.56
FOXF1-201ENST00000262426 IGLV2-23P01705 113 aa11.57□□□□□ -0.56
FOXF1-201ENST00000262426 BMI1P35226 326 aa11.57□□□□□ -0.56
FOXF1-201ENST00000262426 FBXL15Q9H469 300 aa11.57□□□□□ -0.56
FOXF1-201ENST00000262426 USF1P22415 310 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms