RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 LRRK2Q5S007 2527 aa10.81□□□□□ -0.68
VMP1-201ENST00000262291 NCBP2LA6PVI3 153 aaKnown RBP10.8□□□□□ -0.68
VMP1-201ENST00000262291 HNRNPA3P51991 378 aaKnown RBP10.8□□□□□ -0.68
VMP1-201ENST00000262291 ZNF114Q8NC26 417 aa10.8□□□□□ -0.68
VMP1-201ENST00000262291 OR5AU1Q8NGC0 362 aa10.8□□□□□ -0.68
VMP1-201ENST00000262291 ZNF503Q96F45 646 aa10.8□□□□□ -0.68
VMP1-201ENST00000262291 EAF1Q96JC9 268 aaPredicted RBP10.8□□□□□ -0.68
VMP1-201ENST00000262291 KCNIP2Q9NS61 270 aa10.8□□□□□ -0.68
VMP1-201ENST00000262291 FBXL7Q9UJT9 491 aa10.8□□□□□ -0.68
VMP1-201ENST00000262291 ABCA2Q9BZC7 2435 aa10.8□□□□□ -0.68
VMP1-201ENST00000262291 ODF3BA8MYP8 253 aa10.8□□□□□ -0.68
VMP1-201ENST00000262291 LMO4P61968 165 aa10.8□□□□□ -0.68
VMP1-201ENST00000262291 SGMS2Q8NHU3 365 aa10.8□□□□□ -0.68
VMP1-201ENST00000262291 TOX4O94842 621 aa10.79□□□□□ -0.68
VMP1-201ENST00000262291 SRP14P37108 136 aaKnown RBP10.79□□□□□ -0.68
VMP1-201ENST00000262291 FAM120AOSQ5T036 256 aa10.79□□□□□ -0.68
VMP1-201ENST00000262291 BAGE3Q86Y29 109 aa10.79□□□□□ -0.68
VMP1-201ENST00000262291 BAGE2Q86Y30 109 aa10.79□□□□□ -0.68
VMP1-201ENST00000262291 ORAOV1Q8WV07 137 aa10.79□□□□□ -0.68
VMP1-201ENST00000262291 ANAPC16Q96DE5 110 aa10.79□□□□□ -0.68
VMP1-201ENST00000262291 WNT10AQ9GZT5 417 aa10.79□□□□□ -0.68
VMP1-201ENST00000262291 K7EP13 123 aa10.79□□□□□ -0.68
VMP1-201ENST00000262291 HYPMO75409 117 aa10.79□□□□□ -0.68
VMP1-201ENST00000262291 MT-CO2P00403 227 aa10.79□□□□□ -0.68
VMP1-201ENST00000262291 FRMD6-AS1P0C7T7 363 aa10.79□□□□□ -0.68
VMP1-201ENST00000262291 PYYP10082 97 aa10.79□□□□□ -0.68
VMP1-201ENST00000262291 ORM2P19652 201 aa10.79□□□□□ -0.68
VMP1-201ENST00000262291 CACNG8Q8WXS5 425 aa10.79□□□□□ -0.68
VMP1-201ENST00000262291 A1L4Q6 167 aa10.78□□□□□ -0.68
VMP1-201ENST00000262291 DIRC3C9JPN6 131 aa10.78□□□□□ -0.68
VMP1-201ENST00000262291 TMEM250H0YL14 139 aa10.78□□□□□ -0.68
VMP1-201ENST00000262291 NBR2O15453 112 aa10.78□□□□□ -0.68
VMP1-201ENST00000262291 SUMO1P63165 101 aaKnown RBP10.78□□□□□ -0.68
VMP1-201ENST00000262291 SIRPDQ9H106 197 aa10.78□□□□□ -0.68
VMP1-201ENST00000262291 SH2D7A6NKC9 451 aaPredicted RBP10.78□□□□□ -0.68
VMP1-201ENST00000262291 FNDC10F2Z333 226 aa10.78□□□□□ -0.68
VMP1-201ENST00000262291 PRB4P10163 310 aaPredicted RBP10.78□□□□□ -0.68
VMP1-201ENST00000262291 CEACAM3P40198 252 aa10.78□□□□□ -0.68
VMP1-201ENST00000262291 PATE2Q6UY27 113 aa10.78□□□□□ -0.68
VMP1-201ENST00000262291 CCL19Q99731 98 aa10.78□□□□□ -0.68
VMP1-201ENST00000262291 TRBV20OR9-2A0A075B6H5 130 aa10.78□□□□□ -0.68
VMP1-201ENST00000262291 IGHV2-70DA0A0C4DH43 119 aa10.78□□□□□ -0.68
VMP1-201ENST00000262291 OVOL3O00110 214 aa10.78□□□□□ -0.68
VMP1-201ENST00000262291 COX7A2P2O60397 106 aa10.78□□□□□ -0.68
VMP1-201ENST00000262291 PAX2Q02962 417 aa10.78□□□□□ -0.68
VMP1-201ENST00000262291 FXYD3Q14802 87 aa10.78□□□□□ -0.68
VMP1-201ENST00000262291 OR1B1Q8NGR6 318 aa10.78□□□□□ -0.68
VMP1-201ENST00000262291 TNFRSF19Q9NS68 423 aa10.78□□□□□ -0.68
VMP1-201ENST00000262291 COX11Q9Y6N1 276 aa10.78□□□□□ -0.68
VMP1-201ENST00000262291 INS-IGF2F8WCM5 200 aa10.77□□□□□ -0.69
VMP1-201ENST00000262291 H3BTX0 84 aa10.77□□□□□ -0.69
VMP1-201ENST00000262291 CRISP2P16562 243 aa10.77□□□□□ -0.69
VMP1-201ENST00000262291 NUDT10Q8NFP7 164 aa10.77□□□□□ -0.69
VMP1-201ENST00000262291 TCRBV4S1A1TA0A5B7 111 aa10.77□□□□□ -0.69
VMP1-201ENST00000262291 ATP5IP56385 69 aaPredicted RBP10.77□□□□□ -0.69
VMP1-201ENST00000262291 ZNF738Q8NE65 137 aa10.77□□□□□ -0.69
VMP1-201ENST00000262291 PERPQ96FX8 193 aa10.77□□□□□ -0.69
VMP1-201ENST00000262291 ZNF355PQ9NSJ1 428 aa10.77□□□□□ -0.69
VMP1-201ENST00000262291 TECRQ9NZ01 308 aaKnown RBP10.77□□□□□ -0.69
VMP1-201ENST00000262291 TP73-AS1Q9UF72 201 aa10.77□□□□□ -0.69
VMP1-201ENST00000262291 F11RQ9Y624 299 aaKnown RBP10.77□□□□□ -0.69
VMP1-201ENST00000262291 IGHV4-61A0A0C4DH41 118 aa10.76□□□□□ -0.69
VMP1-201ENST00000262291 IGLC2P0DOY2 106 aa10.76□□□□□ -0.69
VMP1-201ENST00000262291 IGLC3P0DOY3 106 aa10.76□□□□□ -0.69
VMP1-201ENST00000262291 NDPQ00604 133 aa10.76□□□□□ -0.69
VMP1-201ENST00000262291 VAMP3Q15836 100 aa10.76□□□□□ -0.69
VMP1-201ENST00000262291 ASPHD1Q5U4P2 390 aa10.76□□□□□ -0.69
VMP1-201ENST00000262291 LINC01551Q86U37 167 aa10.76□□□□□ -0.69
VMP1-201ENST00000262291 OR4B1Q8NGF8 309 aa10.76□□□□□ -0.69
VMP1-201ENST00000262291 SLC25A2Q9BXI2 301 aa10.76□□□□□ -0.69
VMP1-201ENST00000262291 UQCR10Q9UDW1 63 aa10.76□□□□□ -0.69
VMP1-201ENST00000262291 PSMB11A5LHX3 300 aa10.76□□□□□ -0.69
VMP1-201ENST00000262291 PMCHP20382 165 aa10.76□□□□□ -0.69
VMP1-201ENST00000262291 PAFAH1B2P68402 229 aa10.76□□□□□ -0.69
VMP1-201ENST00000262291 C10orf113Q5VZT2 155 aa10.76□□□□□ -0.69
VMP1-201ENST00000262291 SMIM15Q7Z3B0 74 aa10.76□□□□□ -0.69
VMP1-201ENST00000262291 Q8N976 141 aa10.76□□□□□ -0.69
VMP1-201ENST00000262291 RPH3ALQ9UNE2 315 aa10.76□□□□□ -0.69
VMP1-201ENST00000262291 PDE6DO43924 150 aa10.75□□□□□ -0.69
VMP1-201ENST00000262291 IGHV3-23P01764 117 aa10.75□□□□□ -0.69
VMP1-201ENST00000262291 CRYBB3P26998 211 aa10.75□□□□□ -0.69
VMP1-201ENST00000262291 SAA4P35542 130 aa10.75□□□□□ -0.69
VMP1-201ENST00000262291 CTRLP40313 264 aa10.75□□□□□ -0.69
VMP1-201ENST00000262291 KIR3DL3Q8N743 410 aa10.75□□□□□ -0.69
VMP1-201ENST00000262291 SIGLECL1Q8N7X8 197 aa10.75□□□□□ -0.69
VMP1-201ENST00000262291 SOX21Q9Y651 276 aaPredicted RBP10.75□□□□□ -0.69
VMP1-201ENST00000262291 ATP5J2P56134 94 aa10.75□□□□□ -0.69
VMP1-201ENST00000262291 UBE2L3P68036 154 aaKnown RBP10.75□□□□□ -0.69
VMP1-201ENST00000262291 C5orf64Q2M2E5 130 aa10.75□□□□□ -0.69
VMP1-201ENST00000262291 FAM167A-AS1Q96KT0 104 aa10.75□□□□□ -0.69
VMP1-201ENST00000262291 TBL2Q9Y4P3 447 aaKnown RBP10.75□□□□□ -0.69
VMP1-201ENST00000262291 SPINK4O60575 86 aa10.74□□□□□ -0.69
VMP1-201ENST00000262291 C8orf88P0DMB2 117 aa10.74□□□□□ -0.69
VMP1-201ENST00000262291 CX3CL1P78423 397 aa10.74□□□□□ -0.69
VMP1-201ENST00000262291 TMEM249Q2WGJ8 235 aa10.74□□□□□ -0.69
VMP1-201ENST00000262291 TIGITQ495A1 244 aa10.74□□□□□ -0.69
VMP1-201ENST00000262291 LINC00305Q7Z4B0 112 aa10.74□□□□□ -0.69
VMP1-201ENST00000262291 MRPL18Q9H0U6 180 aaKnown RBP10.74□□□□□ -0.69
VMP1-201ENST00000262291 GGTLC3B5MD39 225 aa10.74□□□□□ -0.69
VMP1-201ENST00000262291 TOMM40O96008 361 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms