RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 TMEM258P61165 79 aa6.88□□□□□ -1.31
SNCAIP-201ENST00000261367 SPEM2Q0P670 501 aa6.88□□□□□ -1.31
SNCAIP-201ENST00000261367 ACP7Q6ZNF0 438 aa6.88□□□□□ -1.31
SNCAIP-201ENST00000261367 DNAJC30Q96LL9 226 aa6.88□□□□□ -1.31
SNCAIP-201ENST00000261367 TRGV9Q99603 122 aa6.88□□□□□ -1.31
SNCAIP-201ENST00000261367 MTCL1Q9Y4B5 1905 aaKnown RBP6.88□□□□□ -1.31
SNCAIP-201ENST00000261367 LYZL6O75951 148 aa6.88□□□□□ -1.31
SNCAIP-201ENST00000261367 SAP30O75446 220 aa6.88□□□□□ -1.31
SNCAIP-201ENST00000261367 SRD5A1P18405 259 aa6.88□□□□□ -1.31
SNCAIP-201ENST00000261367 IFI27P40305 119 aaPredicted RBP6.88□□□□□ -1.31
SNCAIP-201ENST00000261367 C12orf74Q32Q52 190 aa6.88□□□□□ -1.31
SNCAIP-201ENST00000261367 ZNF329Q86UD4 541 aa6.88□□□□□ -1.31
SNCAIP-201ENST00000261367 TEN1Q86WV5 123 aa6.88□□□□□ -1.31
SNCAIP-201ENST00000261367 C16orf92Q96LL3 132 aa6.88□□□□□ -1.31
SNCAIP-201ENST00000261367 YPEL4Q96NS1 127 aa6.88□□□□□ -1.31
SNCAIP-201ENST00000261367 MBNL3Q9NUK0 354 aaKnown RBP6.88□□□□□ -1.31
SNCAIP-201ENST00000261367 PAX9P55771 341 aa6.88□□□□□ -1.31
SNCAIP-201ENST00000261367 SPACA3Q8IXA5 215 aa6.88□□□□□ -1.31
SNCAIP-201ENST00000261367 BRWD1Q9NSI6 2320 aa6.88□□□□□ -1.31
SNCAIP-201ENST00000261367 A0A1W2PPI3 338 aa6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 K7EMI3 77 aa6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 CRXO43186 299 aaPredicted RBP6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 CSRP1P21291 193 aaKnown RBP6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 CRYGSP22914 178 aa6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 DUTP33316 252 aaKnown RBP6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 ZIC4Q8N9L1 334 aa6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 PRR7Q8TB68 274 aa6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 KLK15Q9H2R5 256 aa6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 SPTAN1Q13813 2472 aaKnown RBP6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 IGKV1D-43A0A0B4J1Z2 117 aa6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 A0A1B0GUS0 222 aa6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 ATOX1O00244 68 aa6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 SLC25A20O43772 301 aa6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 PLAURQ03405 335 aa6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 PRSS46E5RG02 174 aa6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 COL9A1P20849 921 aa6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 PRSS12P56730 875 aa6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 AMN1Q8IY45 258 aa6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 IGKV3D-11A0A0A0MRZ8 115 aa6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 C15orf62A8K5M9 175 aa6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 IGLL5B9A064 214 aa6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 MNX1P50219 401 aaPredicted RBP6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 FOXI1Q12951 378 aa6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 HAPLN4Q86UW8 402 aa6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 Q8N8P6 123 aa6.87□□□□□ -1.31
SNCAIP-201ENST00000261367 PRRC2CQ9Y520 2896 aaKnown RBP6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 HLA-DRB4P13762 266 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 VWC2Q2TAL6 325 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 TMEM75Q8N9X5 138 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 TMEM141Q96I45 108 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 SPANXB1Q9NS25 103 aaPredicted RBP6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 HLA-DRB4X5D2U9 266 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 A0A087WV48 116 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 TGFAP01135 160 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 CCL3P10147 92 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 GNG5P63218 68 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 ANKRD29Q8N6D5 301 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 C15orf53Q8NAA6 179 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 SMRP1Q8NCR6 262 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 LOXL2Q9Y4K0 774 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 RTTNQ86VV8 2226 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 SNRNP200O75643 2136 aaKnown RBP6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 CNTFRP26992 372 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 GLMPQ8WWB7 406 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 HEATR5BQ9P2D3 2071 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 ASPMQ8IZT6 3477 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 TRAV17A0A0B4J275 112 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 FAM104BQ5XKR9 115 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 TMEM74BQ9NUR3 256 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 PRO1854Q9UHT4 67 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 COL4A3Q01955 1670 aa6.86□□□□□ -1.31
SNCAIP-201ENST00000261367 ALPK3Q96L96 1907 aa6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 COL6A3P12111 3177 aa6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 PRR33A8MZF0 331 aa6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 ETV2O00321 342 aaPredicted RBP6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 CCL7P80098 99 aa6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 ZNF415Q09FC8 603 aa6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 FHL1Q13642 323 aa6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 FOXL2NBQ6ZUU3 175 aa6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 Q86TA4 180 aa6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 ZNF747Q9BV97 191 aa6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 IQCF6A8MYZ5 107 aa6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 NXPH1P58417 271 aa6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 PDE6HQ13956 83 aa6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 STPG1Q5TH74 334 aa6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 MUC22E2RYF6 1773 aaPredicted RBP6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 HCP5Q6MZN7 132 aa6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 EBLN2Q6P2I7 272 aa6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 Q8NFD4 153 aa6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 COLQQ9Y215 455 aaPredicted RBP6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 DENND4AQ7Z401 1863 aa6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 PRRG2O14669 202 aa6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 HERV-K104P63124 156 aa6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 C5orf64Q2M2E5 130 aa6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 OR13A1Q8NGR1 328 aa6.85□□□□□ -1.31
SNCAIP-201ENST00000261367 FOXI3A8MTJ6 420 aaPredicted RBP6.84□□□□□ -1.31
SNCAIP-201ENST00000261367 SLC25A16P16260 332 aa6.84□□□□□ -1.31
SNCAIP-201ENST00000261367 TCF20Q9UGU0 1960 aaKnown RBP6.84□□□□□ -1.31
SNCAIP-201ENST00000261367 CHD8Q9HCK8 2581 aa6.84□□□□□ -1.31
SNCAIP-201ENST00000261367 TRBV7-9A0A0J9YWB2 115 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms