RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 ZNF355PQ9NSJ1 428 aa13.56□□□□□ -0.24
SRSF1-201ENST00000258962 TECRQ9NZ01 308 aaKnown RBP13.56□□□□□ -0.24
SRSF1-201ENST00000258962 TRAV30A0A087WSZ9 112 aa13.55□□□□□ -0.24
SRSF1-201ENST00000258962 PDE6DO43924 150 aa13.55□□□□□ -0.24
SRSF1-201ENST00000258962 GNG7O60262 68 aa13.55□□□□□ -0.24
SRSF1-201ENST00000258962 PAGE4O60829 102 aa13.55□□□□□ -0.24
SRSF1-201ENST00000258962 ORM2P19652 201 aa13.55□□□□□ -0.24
SRSF1-201ENST00000258962 FCGR2BP31994 310 aaPredicted RBP13.55□□□□□ -0.24
SRSF1-201ENST00000258962 CEBPGP53567 150 aa13.55□□□□□ -0.24
SRSF1-201ENST00000258962 CD81P60033 236 aa13.55□□□□□ -0.24
SRSF1-201ENST00000258962 PNRC1Q12796 327 aaPredicted RBP13.55□□□□□ -0.24
SRSF1-201ENST00000258962 C15orf32Q32M92 178 aa13.55□□□□□ -0.24
SRSF1-201ENST00000258962 Q56UQ5 140 aa13.55□□□□□ -0.24
SRSF1-201ENST00000258962 CYB561D1Q8N8Q1 229 aa13.55□□□□□ -0.24
SRSF1-201ENST00000258962 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.55□□□□□ -0.24
SRSF1-201ENST00000258962 NECAP1Q8NC96 275 aa13.55□□□□□ -0.24
SRSF1-201ENST00000258962 OR1B1Q8NGR6 318 aa13.55□□□□□ -0.24
SRSF1-201ENST00000258962 ZNF502Q8TBZ5 544 aa13.55□□□□□ -0.24
SRSF1-201ENST00000258962 TVP23CQ96ET8 276 aa13.55□□□□□ -0.24
SRSF1-201ENST00000258962 MS4A10Q96PG2 267 aa13.55□□□□□ -0.24
SRSF1-201ENST00000258962 SLC25A2Q9BXI2 301 aa13.55□□□□□ -0.24
SRSF1-201ENST00000258962 SMCO4Q9NRQ5 59 aa13.55□□□□□ -0.24
SRSF1-201ENST00000258962 ELOA3CA0A087WX78 387 aaPredicted RBP13.54□□□□□ -0.24
SRSF1-201ENST00000258962 TRAV5A0A0B4J249 113 aa13.54□□□□□ -0.24
SRSF1-201ENST00000258962 B4DEV8 164 aa13.54□□□□□ -0.24
SRSF1-201ENST00000258962 DNASE2O00115 360 aaPredicted RBP13.54□□□□□ -0.24
SRSF1-201ENST00000258962 TOMM40O96008 361 aa13.54□□□□□ -0.24
SRSF1-201ENST00000258962 RD3LP0DJH9 198 aa13.54□□□□□ -0.24
SRSF1-201ENST00000258962 C8orf88P0DMB2 117 aa13.54□□□□□ -0.24
SRSF1-201ENST00000258962 PPIFP30405 207 aaKnown RBP13.54□□□□□ -0.24
SRSF1-201ENST00000258962 YPEL3P61236 119 aaPredicted RBP13.54□□□□□ -0.24
SRSF1-201ENST00000258962 PQLC2Q6ZP29 291 aa13.54□□□□□ -0.24
SRSF1-201ENST00000258962 TXN2Q99757 166 aa13.54□□□□□ -0.24
SRSF1-201ENST00000258962 PRSS22Q9GZN4 317 aa13.54□□□□□ -0.24
SRSF1-201ENST00000258962 TMEM167BQ9NRX6 74 aa13.54□□□□□ -0.24
SRSF1-201ENST00000258962 ARL2-SNX15V9GYD0 113 aa13.54□□□□□ -0.24
SRSF1-201ENST00000258962 F6UZH7 168 aa13.54□□□□□ -0.24
SRSF1-201ENST00000258962 H3BQ15 152 aa13.54□□□□□ -0.24
SRSF1-201ENST00000258962 AP4M1O00189 453 aa13.54□□□□□ -0.24
SRSF1-201ENST00000258962 HYPMO75409 117 aa13.54□□□□□ -0.24
SRSF1-201ENST00000258962 LYZP61626 148 aa13.54□□□□□ -0.24
SRSF1-201ENST00000258962 LINC00305Q7Z4B0 112 aa13.54□□□□□ -0.24
SRSF1-201ENST00000258962 RPS10P5Q9NQ39 176 aa13.54□□□□□ -0.24
SRSF1-201ENST00000258962 ZNF580Q9UK33 172 aa13.54□□□□□ -0.24
SRSF1-201ENST00000258962 PRELID1Q9Y255 219 aa13.54□□□□□ -0.24
SRSF1-201ENST00000258962 PUS1Q9Y606 427 aaKnown RBP eCLIP13.54□□□□□ -0.24
SRSF1-201ENST00000258962 TENM1Q9UKZ4 2725 aa13.54□□□□□ -0.24
SRSF1-201ENST00000258962 OR2T8A6NH00 312 aa13.53□□□□□ -0.24
SRSF1-201ENST00000258962 SCGB2A1O75556 95 aa13.53□□□□□ -0.24
SRSF1-201ENST00000258962 UBE2G2P60604 165 aa13.53□□□□□ -0.24
SRSF1-201ENST00000258962 TMEM95Q3KNT9 176 aa13.53□□□□□ -0.24
SRSF1-201ENST00000258962 FAM90A2PQ658T7 463 aa13.53□□□□□ -0.24
SRSF1-201ENST00000258962 WFDC12Q8WWY7 111 aa13.53□□□□□ -0.24
SRSF1-201ENST00000258962 ZNF414Q96IQ9 312 aa13.53□□□□□ -0.24
SRSF1-201ENST00000258962 CCDC140Q96MF4 163 aa13.53□□□□□ -0.24
SRSF1-201ENST00000258962 WI2-2373I1.2A0A1W2PRP0 233 aa13.52□□□□□ -0.25
SRSF1-201ENST00000258962 C7orf77A4D0Y5 90 aa13.52□□□□□ -0.25
SRSF1-201ENST00000258962 OR7C2O60412 319 aa13.52□□□□□ -0.25
SRSF1-201ENST00000258962 BRI3O95415 125 aa13.52□□□□□ -0.25
SRSF1-201ENST00000258962 CTSGP08311 255 aa13.52□□□□□ -0.25
SRSF1-201ENST00000258962 ADMP35318 185 aa13.52□□□□□ -0.25
SRSF1-201ENST00000258962 ATP5G3P48201 142 aa13.52□□□□□ -0.25
SRSF1-201ENST00000258962 PROK1P58294 105 aa13.52□□□□□ -0.25
SRSF1-201ENST00000258962 CFHR3Q02985 330 aa13.52□□□□□ -0.25
SRSF1-201ENST00000258962 ZNF491Q8N8L2 437 aa13.52□□□□□ -0.25
SRSF1-201ENST00000258962 OR5AU1Q8NGC0 362 aa13.52□□□□□ -0.25
SRSF1-201ENST00000258962 OR51G1Q8NGK1 321 aa13.52□□□□□ -0.25
SRSF1-201ENST00000258962 OR4F4Q96R69 305 aa13.52□□□□□ -0.25
SRSF1-201ENST00000258962 TUBA4BQ9H853 241 aa13.52□□□□□ -0.25
SRSF1-201ENST00000258962 MRPL27Q9P0M9 148 aaKnown RBP13.52□□□□□ -0.25
SRSF1-201ENST00000258962 YTHDF2Q9Y5A9 579 aaKnown RBP13.52□□□□□ -0.25
SRSF1-201ENST00000258962 FAM223BA6NKX1 122 aa13.51□□□□□ -0.25
SRSF1-201ENST00000258962 C11orf94C9JXX5 98 aa13.51□□□□□ -0.25
SRSF1-201ENST00000258962 H3BUA1 57 aa13.51□□□□□ -0.25
SRSF1-201ENST00000258962 S100A7AQ86SG5 101 aa13.51□□□□□ -0.25
SRSF1-201ENST00000258962 FAM223AQ8IWN6 122 aa13.51□□□□□ -0.25
SRSF1-201ENST00000258962 STXBP6Q8NFX7 210 aa13.51□□□□□ -0.25
SRSF1-201ENST00000258962 CHRDL1Q9BU40 450 aa13.51□□□□□ -0.25
SRSF1-201ENST00000258962 HIGD1AQ9Y241 93 aa13.51□□□□□ -0.25
SRSF1-201ENST00000258962 DNHD1Q96M86 4753 aa13.51□□□□□ -0.25
SRSF1-201ENST00000258962 ZNF727A8MUV8 499 aa13.5□□□□□ -0.25
SRSF1-201ENST00000258962 TSPAN4O14817 238 aa13.5□□□□□ -0.25
SRSF1-201ENST00000258962 OR2C1O95371 312 aa13.5□□□□□ -0.25
SRSF1-201ENST00000258962 TRGV3P03979 118 aa13.5□□□□□ -0.25
SRSF1-201ENST00000258962 OR10J4P0C629 311 aa13.5□□□□□ -0.25
SRSF1-201ENST00000258962 GPR183P32249 361 aa13.5□□□□□ -0.25
SRSF1-201ENST00000258962 KIAA0141Q14154 515 aaPredicted RBP13.5□□□□□ -0.25
SRSF1-201ENST00000258962 CST9LP1Q5W188 147 aa13.5□□□□□ -0.25
SRSF1-201ENST00000258962 EEF1AKMT3Q96AZ1 226 aa13.5□□□□□ -0.25
SRSF1-201ENST00000258962 RNF125Q96EQ8 232 aa13.5□□□□□ -0.25
SRSF1-201ENST00000258962 ZNF702PQ9H963 129 aa13.5□□□□□ -0.25
SRSF1-201ENST00000258962 A0A087WWC5 75 aa13.49□□□□□ -0.25
SRSF1-201ENST00000258962 FAM74A7A6NL05 159 aa13.49□□□□□ -0.25
SRSF1-201ENST00000258962 IGLV1-40P01703 118 aa13.49□□□□□ -0.25
SRSF1-201ENST00000258962 IL4P05112 153 aa13.49□□□□□ -0.25
SRSF1-201ENST00000258962 PYYP10082 97 aa13.49□□□□□ -0.25
SRSF1-201ENST00000258962 ATP5G2Q06055 141 aa13.49□□□□□ -0.25
SRSF1-201ENST00000258962 USF2Q15853 346 aaPredicted RBP13.49□□□□□ -0.25
SRSF1-201ENST00000258962 Q8N2B8 174 aa13.49□□□□□ -0.25
SRSF1-201ENST00000258962 NAT8Q9UHE5 227 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms