RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 GDF5OSQ5U4N7 250 aa13.09□□□□□ -0.31
UBQLN1-201ENST00000257468 LURAP1LQ8IV03 231 aa13.09□□□□□ -0.31
UBQLN1-201ENST00000257468 DYNAPQ8N1N2 210 aa13.09□□□□□ -0.31
UBQLN1-201ENST00000257468 TRAV8-1A0A0A6YYK1 113 aa13.09□□□□□ -0.31
UBQLN1-201ENST00000257468 EXOC3-AS1Q8N2X6 119 aa13.09□□□□□ -0.31
UBQLN1-201ENST00000257468 GRAMD2BQ96HH9 432 aa13.09□□□□□ -0.31
UBQLN1-201ENST00000257468 RNF5Q99942 180 aa13.09□□□□□ -0.31
UBQLN1-201ENST00000257468 SAMD10Q9BYL1 202 aa13.09□□□□□ -0.31
UBQLN1-201ENST00000257468 ZNF586Q9NXT0 402 aa13.09□□□□□ -0.31
UBQLN1-201ENST00000257468 CHD8Q9HCK8 2581 aa13.08□□□□□ -0.31
UBQLN1-201ENST00000257468 ZNF705FA8MVS1 300 aaPredicted RBP13.08□□□□□ -0.32
UBQLN1-201ENST00000257468 ODF3BA8MYP8 253 aa13.08□□□□□ -0.32
UBQLN1-201ENST00000257468 VWC2LB2RUY7 222 aa13.08□□□□□ -0.32
UBQLN1-201ENST00000257468 ZNF705DP0CH99 300 aaPredicted RBP13.08□□□□□ -0.32
UBQLN1-201ENST00000257468 ZNF705BP0CI00 300 aaPredicted RBP13.08□□□□□ -0.32
UBQLN1-201ENST00000257468 RPL19P84098 196 aaKnown RBP13.08□□□□□ -0.32
UBQLN1-201ENST00000257468 LY6DQ14210 128 aa13.08□□□□□ -0.32
UBQLN1-201ENST00000257468 USF2Q15853 346 aaPredicted RBP13.08□□□□□ -0.32
UBQLN1-201ENST00000257468 KIR3DL3Q8N743 410 aa13.08□□□□□ -0.32
UBQLN1-201ENST00000257468 NEU1Q99519 415 aa13.08□□□□□ -0.32
UBQLN1-201ENST00000257468 ATG101Q9BSB4 218 aa13.08□□□□□ -0.32
UBQLN1-201ENST00000257468 KLF12Q9Y4X4 402 aa13.08□□□□□ -0.32
UBQLN1-201ENST00000257468 HLA-DQA1P01909 254 aa13.08□□□□□ -0.32
UBQLN1-201ENST00000257468 TCRAP04437 139 aa13.08□□□□□ -0.32
UBQLN1-201ENST00000257468 PAFAH1B2P68402 229 aa13.08□□□□□ -0.32
UBQLN1-201ENST00000257468 C5orf17Q8NAS9 161 aa13.08□□□□□ -0.32
UBQLN1-201ENST00000257468 TMEM68Q96MH6 324 aa13.08□□□□□ -0.32
UBQLN1-201ENST00000257468 TBX15Q96SF7 602 aa13.08□□□□□ -0.32
UBQLN1-201ENST00000257468 ZNF331Q9NQX6 463 aaPredicted RBP13.08□□□□□ -0.32
UBQLN1-201ENST00000257468 HIGD1CA8MV81 97 aa13.07□□□□□ -0.32
UBQLN1-201ENST00000257468 APCSP02743 223 aa13.07□□□□□ -0.32
UBQLN1-201ENST00000257468 TDRG1Q3Y452 100 aa13.07□□□□□ -0.32
UBQLN1-201ENST00000257468 TOMM20LQ6UXN7 152 aa13.07□□□□□ -0.32
UBQLN1-201ENST00000257468 C17orf77Q96MU5 243 aa13.07□□□□□ -0.32
UBQLN1-201ENST00000257468 NOL4LQ96MY1 436 aaPredicted RBP13.07□□□□□ -0.32
UBQLN1-201ENST00000257468 GPR82Q96P67 336 aa13.07□□□□□ -0.32
UBQLN1-201ENST00000257468 RBM14Q96PK6 669 aaKnown RBP13.07□□□□□ -0.32
UBQLN1-201ENST00000257468 MLST8Q9BVC4 326 aa13.07□□□□□ -0.32
UBQLN1-201ENST00000257468 SSBP4Q9BWG4 385 aaPredicted RBP13.07□□□□□ -0.32
UBQLN1-201ENST00000257468 SPTBN1Q01082 2364 aaKnown RBP13.07□□□□□ -0.32
UBQLN1-201ENST00000257468 ZNF253O75346 499 aa13.06□□□□□ -0.32
UBQLN1-201ENST00000257468 PRTN3P24158 256 aa13.06□□□□□ -0.32
UBQLN1-201ENST00000257468 ZFP36P26651 326 aaKnown RBP13.06□□□□□ -0.32
UBQLN1-201ENST00000257468 TCF24Q7RTU0 167 aa13.06□□□□□ -0.32
UBQLN1-201ENST00000257468 VMO1Q7Z5L0 202 aa13.06□□□□□ -0.32
UBQLN1-201ENST00000257468 BCL6BQ8N143 479 aaPredicted RBP13.06□□□□□ -0.32
UBQLN1-201ENST00000257468 ASCL2Q99929 193 aa13.06□□□□□ -0.32
UBQLN1-201ENST00000257468 NCOR2Q9Y618 2525 aa13.06□□□□□ -0.32
UBQLN1-201ENST00000257468 M0R1W7 72 aa13.06□□□□□ -0.32
UBQLN1-201ENST00000257468 NDUFA3O95167 84 aa13.06□□□□□ -0.32
UBQLN1-201ENST00000257468 CEACAM3P40198 252 aa13.06□□□□□ -0.32
UBQLN1-201ENST00000257468 NDPQ00604 133 aa13.06□□□□□ -0.32
UBQLN1-201ENST00000257468 MRPL27Q9P0M9 148 aaKnown RBP13.06□□□□□ -0.32
UBQLN1-201ENST00000257468 ITPR1Q14643 2758 aa13.06□□□□□ -0.32
UBQLN1-201ENST00000257468 TOMM40O96008 361 aa13.05□□□□□ -0.32
UBQLN1-201ENST00000257468 LTAP01374 205 aa13.05□□□□□ -0.32
UBQLN1-201ENST00000257468 HIST1H1EP10412 219 aaKnown RBP13.05□□□□□ -0.32
UBQLN1-201ENST00000257468 PMCHP20382 165 aa13.05□□□□□ -0.32
UBQLN1-201ENST00000257468 GPR6P46095 362 aaPredicted RBP13.05□□□□□ -0.32
UBQLN1-201ENST00000257468 CAMPP49913 170 aa13.05□□□□□ -0.32
UBQLN1-201ENST00000257468 NPBQ8NG41 125 aa13.05□□□□□ -0.32
UBQLN1-201ENST00000257468 TSKUQ8WUA8 353 aa13.05□□□□□ -0.32
UBQLN1-201ENST00000257468 NEU4Q8WWR8 484 aaPredicted RBP13.05□□□□□ -0.32
UBQLN1-201ENST00000257468 FBXL7Q9UJT9 491 aa13.05□□□□□ -0.32
UBQLN1-201ENST00000257468 BRS3P32247 399 aa13.05□□□□□ -0.32
UBQLN1-201ENST00000257468 C5orf64Q2M2E5 130 aa13.05□□□□□ -0.32
UBQLN1-201ENST00000257468 COX19Q49B96 90 aa13.05□□□□□ -0.32
UBQLN1-201ENST00000257468 FMC1Q96HJ9 113 aa13.05□□□□□ -0.32
UBQLN1-201ENST00000257468 NDUFAF3Q9BU61 184 aa13.05□□□□□ -0.32
UBQLN1-201ENST00000257468 TBL2Q9Y4P3 447 aaKnown RBP13.05□□□□□ -0.32
UBQLN1-201ENST00000257468 MED13LQ71F56 2210 aa13.04□□□□□ -0.32
UBQLN1-201ENST00000257468 A0A1W2PS18 150 aa13.04□□□□□ -0.32
UBQLN1-201ENST00000257468 NCBP2LA6PVI3 153 aaKnown RBP13.04□□□□□ -0.32
UBQLN1-201ENST00000257468 IL4P05112 153 aa13.04□□□□□ -0.32
UBQLN1-201ENST00000257468 GPX1P07203 203 aa13.04□□□□□ -0.32
UBQLN1-201ENST00000257468 OR10J3Q5JRS4 329 aa13.04□□□□□ -0.32
UBQLN1-201ENST00000257468 GOLT1AQ6ZVE7 132 aa13.04□□□□□ -0.32
UBQLN1-201ENST00000257468 SIGLECL1Q8N7X8 197 aa13.04□□□□□ -0.32
UBQLN1-201ENST00000257468 KCNS1Q96KK3 526 aa13.04□□□□□ -0.32
UBQLN1-201ENST00000257468 WNK2Q9Y3S1 2297 aa13.04□□□□□ -0.32
UBQLN1-201ENST00000257468 HIVEP3Q5T1R4 2406 aa13.04□□□□□ -0.32
UBQLN1-201ENST00000257468 A0A1B0GV90 55 aa13.04□□□□□ -0.32
UBQLN1-201ENST00000257468 AMTP48728 403 aa13.04□□□□□ -0.32
UBQLN1-201ENST00000257468 CIARTQ8N365 385 aaPredicted RBP13.04□□□□□ -0.32
UBQLN1-201ENST00000257468 VN1R17PQ8TDU5 208 aa13.04□□□□□ -0.32
UBQLN1-201ENST00000257468 WIPF2Q8TF74 440 aaPredicted RBP13.04□□□□□ -0.32
UBQLN1-201ENST00000257468 SRSF8Q9BRL6 282 aaKnown RBP13.04□□□□□ -0.32
UBQLN1-201ENST00000257468 ZFHX3Q15911 3703 aa13.03□□□□□ -0.32
UBQLN1-201ENST00000257468 IGHV3-23P01764 117 aa13.03□□□□□ -0.32
UBQLN1-201ENST00000257468 FAM19A2Q8N3H0 131 aa13.03□□□□□ -0.32
UBQLN1-201ENST00000257468 ZNF491Q8N8L2 437 aa13.03□□□□□ -0.32
UBQLN1-201ENST00000257468 RPP21Q9H633 154 aaKnown RBP13.03□□□□□ -0.32
UBQLN1-201ENST00000257468 TMEM14CQ9P0S9 112 aa13.03□□□□□ -0.32
UBQLN1-201ENST00000257468 HOXB4P17483 251 aaPredicted RBP13.02□□□□□ -0.32
UBQLN1-201ENST00000257468 KRTDAPP60985 99 aa13.02□□□□□ -0.32
UBQLN1-201ENST00000257468 C1orf194Q5T5A4 169 aa13.02□□□□□ -0.32
UBQLN1-201ENST00000257468 PRNTQ86SH4 94 aa13.02□□□□□ -0.32
UBQLN1-201ENST00000257468 Q86TA4 180 aa13.02□□□□□ -0.32
UBQLN1-201ENST00000257468 DTX2Q86UW9 622 aa13.02□□□□□ -0.32
UBQLN1-201ENST00000257468 C18orf32Q8TCD1 76 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms