RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 RNASE2P10153 161 aaKnown RBP10.78□□□□□ -0.68
PRPF38A-201ENST00000257181 CHCHD5Q9BSY4 110 aa10.78□□□□□ -0.68
PRPF38A-201ENST00000257181 LOC102724200A0A096LPH7 203 aaPredicted RBP10.78□□□□□ -0.68
PRPF38A-201ENST00000257181 SHISA3A0PJX4 238 aa10.78□□□□□ -0.68
PRPF38A-201ENST00000257181 C15orf62A8K5M9 175 aa10.78□□□□□ -0.68
PRPF38A-201ENST00000257181 A8MWV9 139 aa10.78□□□□□ -0.68
PRPF38A-201ENST00000257181 PRR32B1ATL7 298 aa10.78□□□□□ -0.68
PRPF38A-201ENST00000257181 DEFB131AP59861 70 aa10.78□□□□□ -0.68
PRPF38A-201ENST00000257181 MIR17HGQ75NE6 70 aa10.78□□□□□ -0.68
PRPF38A-201ENST00000257181 NDUFA4L2Q9NRX3 87 aa10.78□□□□□ -0.68
PRPF38A-201ENST00000257181 ZNRD1Q9P1U0 126 aa10.78□□□□□ -0.68
PRPF38A-201ENST00000257181 LY96Q9Y6Y9 160 aa10.78□□□□□ -0.68
PRPF38A-201ENST00000257181 CRXO43186 299 aaPredicted RBP10.78□□□□□ -0.68
PRPF38A-201ENST00000257181 CXCL3P19876 107 aa10.78□□□□□ -0.68
PRPF38A-201ENST00000257181 PMCHL1Q16048 86 aa10.78□□□□□ -0.68
PRPF38A-201ENST00000257181 LAIR2Q6ISS4 152 aa10.78□□□□□ -0.68
PRPF38A-201ENST00000257181 TMEM14BQ9NUH8 114 aa10.78□□□□□ -0.68
PRPF38A-201ENST00000257181 SNRPEP62304 92 aaKnown RBP10.78□□□□□ -0.68
PRPF38A-201ENST00000257181 TFF3Q07654 80 aa10.78□□□□□ -0.68
PRPF38A-201ENST00000257181 GUSBP1Q15486 140 aa10.78□□□□□ -0.68
PRPF38A-201ENST00000257181 OSTCQ9NRP0 149 aa10.78□□□□□ -0.68
PRPF38A-201ENST00000257181 TRGV1A0A0A0MS02 117 aa10.77□□□□□ -0.68
PRPF38A-201ENST00000257181 C10orf142B7Z368 130 aa10.77□□□□□ -0.68
PRPF38A-201ENST00000257181 GRNP28799 593 aaKnown RBP10.77□□□□□ -0.68
PRPF38A-201ENST00000257181 LHFPL4Q7Z7J7 247 aa10.77□□□□□ -0.68
PRPF38A-201ENST00000257181 KLHDC3Q9BQ90 382 aa10.77□□□□□ -0.68
PRPF38A-201ENST00000257181 A6NDN8 102 aa10.77□□□□□ -0.69
PRPF38A-201ENST00000257181 IGHV4-59P01825 116 aa10.77□□□□□ -0.69
PRPF38A-201ENST00000257181 HNRNPA3P51991 378 aaKnown RBP10.77□□□□□ -0.69
PRPF38A-201ENST00000257181 FHL1Q13642 323 aa10.77□□□□□ -0.69
PRPF38A-201ENST00000257181 ZNF493Q6ZR52 646 aa10.77□□□□□ -0.69
PRPF38A-201ENST00000257181 Q71RC1 249 aaPredicted RBP10.77□□□□□ -0.69
PRPF38A-201ENST00000257181 ORMDL3Q8N138 153 aa10.77□□□□□ -0.69
PRPF38A-201ENST00000257181 TMEM160Q9NX00 188 aa10.77□□□□□ -0.69
PRPF38A-201ENST00000257181 C5orf63A6NC05 138 aa10.77□□□□□ -0.69
PRPF38A-201ENST00000257181 CA1P00915 261 aaPredicted RBP10.77□□□□□ -0.69
PRPF38A-201ENST00000257181 CNTFRP26992 372 aa10.77□□□□□ -0.69
PRPF38A-201ENST00000257181 PSMB2P49721 201 aa10.77□□□□□ -0.69
PRPF38A-201ENST00000257181 TMEM14EPQ6UXP3 125 aa10.77□□□□□ -0.69
PRPF38A-201ENST00000257181 DEFA6Q01524 100 aa10.77□□□□□ -0.69
PRPF38A-201ENST00000257181 RAB37Q96AX2 223 aa10.77□□□□□ -0.69
PRPF38A-201ENST00000257181 ARID1BQ8NFD5 2236 aaPredicted RBP10.76□□□□□ -0.69
PRPF38A-201ENST00000257181 IL36BQ9NZH7 164 aa10.76□□□□□ -0.69
PRPF38A-201ENST00000257181 ELF5Q9UKW6 265 aaPredicted RBP10.76□□□□□ -0.69
PRPF38A-201ENST00000257181 C22orf46C9J442 243 aa10.76□□□□□ -0.69
PRPF38A-201ENST00000257181 GZMBP10144 247 aa10.76□□□□□ -0.69
PRPF38A-201ENST00000257181 TMEM14CQ9P0S9 112 aa10.76□□□□□ -0.69
PRPF38A-201ENST00000257181 IZUMO1RA6ND01 250 aa10.76□□□□□ -0.69
PRPF38A-201ENST00000257181 K7EMT4 169 aa10.76□□□□□ -0.69
PRPF38A-201ENST00000257181 SRSF1Q07955 248 aaKnown RBP eCLIP10.76□□□□□ -0.691e-6■■■□□ 17.4
PRPF38A-201ENST00000257181 SMAD5-AS1Q9Y6J3 95 aa10.76□□□□□ -0.69
PRPF38A-201ENST00000257181 MYLKQ15746 1914 aa10.76□□□□□ -0.69
PRPF38A-201ENST00000257181 GP9P14770 177 aa10.76□□□□□ -0.69
PRPF38A-201ENST00000257181 TMEM131Q92545 1883 aa10.75□□□□□ -0.69
PRPF38A-201ENST00000257181 C15orf65H3BRN8 121 aa10.75□□□□□ -0.69
PRPF38A-201ENST00000257181 IGHV4-31P0DP07 118 aa10.75□□□□□ -0.69
PRPF38A-201ENST00000257181 PARLQ9H300 379 aa10.75□□□□□ -0.69
PRPF38A-201ENST00000257181 LINC00862A6NCI5 91 aa10.75□□□□□ -0.69
PRPF38A-201ENST00000257181 SS18Q15532 418 aa10.75□□□□□ -0.69
PRPF38A-201ENST00000257181 RASL11AQ6T310 242 aa10.75□□□□□ -0.69
PRPF38A-201ENST00000257181 TREML4Q6UXN2 200 aa10.75□□□□□ -0.69
PRPF38A-201ENST00000257181 SEM1Q6ZVN7 128 aa10.75□□□□□ -0.69
PRPF38A-201ENST00000257181 LAMTOR2Q9Y2Q5 125 aa10.75□□□□□ -0.69
PRPF38A-201ENST00000257181 ANAPC10Q9UM13 185 aa10.75□□□□□ -0.69
PRPF38A-201ENST00000257181 CYSLTR1Q9Y271 337 aa10.75□□□□□ -0.69
PRPF38A-201ENST00000257181 LENEPQ9Y5L5 61 aa10.75□□□□□ -0.69
PRPF38A-201ENST00000257181 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.74□□□□□ -0.69
PRPF38A-201ENST00000257181 IGHV3-48P01763 117 aa10.74□□□□□ -0.69
PRPF38A-201ENST00000257181 ARL6IP6Q8N6S5 226 aa10.74□□□□□ -0.69
PRPF38A-201ENST00000257181 IMMP2LQ96T52 175 aa10.74□□□□□ -0.69
PRPF38A-201ENST00000257181 C7orf77A4D0Y5 90 aa10.74□□□□□ -0.69
PRPF38A-201ENST00000257181 MBD3L1Q8WWY6 194 aa10.74□□□□□ -0.69
PRPF38A-201ENST00000257181 KIF26AQ9ULI4 1882 aaPredicted RBP10.74□□□□□ -0.69
PRPF38A-201ENST00000257181 ZNF114Q8NC26 417 aa10.74□□□□□ -0.69
PRPF38A-201ENST00000257181 VCX2Q9H322 139 aa10.74□□□□□ -0.69
PRPF38A-201ENST00000257181 SCN8AQ9UQD0 1980 aa10.74□□□□□ -0.69
PRPF38A-201ENST00000257181 RP1L1Q8IWN7 2480 aaPredicted RBP10.74□□□□□ -0.69
PRPF38A-201ENST00000257181 FABP4P15090 132 aa10.74□□□□□ -0.69
PRPF38A-201ENST00000257181 TMEM183AQ8IXX5 376 aa10.74□□□□□ -0.69
PRPF38A-201ENST00000257181 ZNF502Q8TBZ5 544 aa10.74□□□□□ -0.69
PRPF38A-201ENST00000257181 C20orf144Q9BQM9 153 aa10.74□□□□□ -0.69
PRPF38A-201ENST00000257181 A0A087X0M5 115 aa10.73□□□□□ -0.69
PRPF38A-201ENST00000257181 A0A1B0GX30 115 aa10.73□□□□□ -0.69
PRPF38A-201ENST00000257181 GPHA2Q96T91 129 aa10.73□□□□□ -0.69
PRPF38A-201ENST00000257181 CACNA1BQ00975 2339 aa10.73□□□□□ -0.69
PRPF38A-201ENST00000257181 FAM186AA6NE01 2351 aa10.73□□□□□ -0.69
PRPF38A-201ENST00000257181 A0A1W2PPI3 338 aa10.73□□□□□ -0.69
PRPF38A-201ENST00000257181 PFN1P07737 140 aaKnown RBP10.73□□□□□ -0.69
PRPF38A-201ENST00000257181 STAG3L3P0CL85 134 aa10.73□□□□□ -0.69
PRPF38A-201ENST00000257181 HOXA5P20719 270 aa10.73□□□□□ -0.69
PRPF38A-201ENST00000257181 RP1P56715 2156 aa10.73□□□□□ -0.69
PRPF38A-201ENST00000257181 SRRM4A7MD48 611 aaKnown RBP10.73□□□□□ -0.69
PRPF38A-201ENST00000257181 TFF1P04155 84 aa10.73□□□□□ -0.69
PRPF38A-201ENST00000257181 OR5A1Q8NGJ0 315 aa10.73□□□□□ -0.69
PRPF38A-201ENST00000257181 GGTLC1Q9BX51 225 aa10.73□□□□□ -0.69
PRPF38A-201ENST00000257181 C7orf71A4D174 169 aa10.73□□□□□ -0.69
PRPF38A-201ENST00000257181 SLC25A20O43772 301 aa10.73□□□□□ -0.69
PRPF38A-201ENST00000257181 FCN3O75636 299 aa10.73□□□□□ -0.69
PRPF38A-201ENST00000257181 SIRPDQ9H106 197 aa10.73□□□□□ -0.69
PRPF38A-201ENST00000257181 DENND4AQ7Z401 1863 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms