RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 PCP4P48539 62 aa7.37□□□□□ -1.23
PDE6A-201ENST00000255266 WFDC11Q8NEX6 87 aa7.37□□□□□ -1.23
PDE6A-201ENST00000255266 C4orf3Q8WVX3 66 aa7.37□□□□□ -1.23
PDE6A-201ENST00000255266 TMEM50AO95807 157 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 PSG3Q16557 428 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 Q8NFD4 153 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 TMEM14BQ9NUH8 114 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 KLF17Q5JT82 389 aaPredicted RBP7.36□□□□□ -1.23
PDE6A-201ENST00000255266 CFAP161Q6P656 301 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 RCC1LQ96I51 464 aaKnown RBP7.36□□□□□ -1.23
PDE6A-201ENST00000255266 AP5S1Q9NUS5 200 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 KIF26BQ2KJY2 2108 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 G3V318 75 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 IGKV1-16P04430 117 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 TRBV20OR9-2A0A075B6H5 130 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 TRAV3A0A0B4J244 114 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 INAFM1C9JVW0 142 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 H3BRM9 83 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 GATA2P23769 480 aaPredicted RBP7.36□□□□□ -1.23
PDE6A-201ENST00000255266 RMI2Q96E14 147 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 UBE2E2Q96LR5 201 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 IGHV7-4-1A0A0J9YVY3 117 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 CXorf65A6NEN9 183 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 LINC01549A6NIU2 74 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 FCN3O75636 299 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 CA1P00915 261 aaPredicted RBP7.36□□□□□ -1.23
PDE6A-201ENST00000255266 BTF3P20290 206 aaKnown RBP7.36□□□□□ -1.23
PDE6A-201ENST00000255266 H2BFSP57053 126 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 LYRM7Q5U5X0 104 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 LINC00518Q8N0U6 118 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 TMEM37Q8WXS4 190 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 ATP6V0BQ99437 205 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 SHANK2-AS3Q9BTD1 123 aa7.36□□□□□ -1.23
PDE6A-201ENST00000255266 TMEM218A2RU14 115 aa7.35□□□□□ -1.23
PDE6A-201ENST00000255266 IGKV1-5P01602 117 aa7.35□□□□□ -1.23
PDE6A-201ENST00000255266 CNTFRP26992 372 aa7.35□□□□□ -1.23
PDE6A-201ENST00000255266 TREML4Q6UXN2 200 aa7.35□□□□□ -1.23
PDE6A-201ENST00000255266 PARD6GQ9BYG4 376 aaPredicted RBP7.35□□□□□ -1.23
PDE6A-201ENST00000255266 TRAV25A0A0B4J276 109 aa7.35□□□□□ -1.23
PDE6A-201ENST00000255266 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.35□□□□□ -1.23
PDE6A-201ENST00000255266 FAM3BP58499 235 aaPredicted RBP7.35□□□□□ -1.23
PDE6A-201ENST00000255266 HBBP68871 147 aa7.35□□□□□ -1.23
PDE6A-201ENST00000255266 NDPQ00604 133 aa7.35□□□□□ -1.23
PDE6A-201ENST00000255266 CIRBPQ14011 172 aaKnown RBP7.35□□□□□ -1.23
PDE6A-201ENST00000255266 AWAT1Q58HT5 328 aa7.35□□□□□ -1.23
PDE6A-201ENST00000255266 ZNF506Q5JVG8 444 aa7.35□□□□□ -1.23
PDE6A-201ENST00000255266 FAM90A2PQ658T7 463 aa7.35□□□□□ -1.23
PDE6A-201ENST00000255266 MALP21145 153 aa7.35□□□□□ -1.23
PDE6A-201ENST00000255266 RPL36AP83881 106 aaKnown RBP7.35□□□□□ -1.23
PDE6A-201ENST00000255266 C11orf71Q6IPW1 123 aa7.35□□□□□ -1.23
PDE6A-201ENST00000255266 RPL36ALQ969Q0 106 aaKnown RBP7.35□□□□□ -1.23
PDE6A-201ENST00000255266 TRGV1A0A0A0MS02 117 aa7.34□□□□□ -1.23
PDE6A-201ENST00000255266 GP9P14770 177 aa7.34□□□□□ -1.23
PDE6A-201ENST00000255266 ELOBQ15370 118 aa7.34□□□□□ -1.23
PDE6A-201ENST00000255266 Q6YL49 198 aa7.34□□□□□ -1.23
PDE6A-201ENST00000255266 MRPS16Q9Y3D3 137 aaKnown RBP7.34□□□□□ -1.23
PDE6A-201ENST00000255266 SLAQ13239 276 aa7.34□□□□□ -1.23
PDE6A-201ENST00000255266 OR10J3Q5JRS4 329 aa7.34□□□□□ -1.23
PDE6A-201ENST00000255266 MUC21Q5SSG8 566 aa7.34□□□□□ -1.23
PDE6A-201ENST00000255266 REC114Q7Z4M0 266 aa7.34□□□□□ -1.23
PDE6A-201ENST00000255266 ST20Q9HBF5 79 aa7.34□□□□□ -1.23
PDE6A-201ENST00000255266 ANAPC10Q9UM13 185 aa7.34□□□□□ -1.23
PDE6A-201ENST00000255266 LOC389332A0A1B0GUA5 103 aa7.34□□□□□ -1.23
PDE6A-201ENST00000255266 POU2AF1Q16633 256 aa7.34□□□□□ -1.23
PDE6A-201ENST00000255266 TMEM14EPQ6UXP3 125 aa7.34□□□□□ -1.23
PDE6A-201ENST00000255266 SPAG8Q99932 426 aaPredicted RBP7.34□□□□□ -1.23
PDE6A-201ENST00000255266 KLK5Q9Y337 293 aaPredicted RBP7.34□□□□□ -1.23
PDE6A-201ENST00000255266 APC2O95996 2303 aa7.34□□□□□ -1.23
PDE6A-201ENST00000255266 PUSL1Q8N0Z8 303 aaKnown RBP7.34□□□□□ -1.23
PDE6A-201ENST00000255266 TRAV9-1A0A075B6T8 112 aa7.33□□□□□ -1.24
PDE6A-201ENST00000255266 SMIM12Q96EX1 92 aa7.33□□□□□ -1.24
PDE6A-201ENST00000255266 SFRP2Q96HF1 295 aa7.33□□□□□ -1.24
PDE6A-201ENST00000255266 SCRT1Q9BWW7 348 aa7.33□□□□□ -1.24
PDE6A-201ENST00000255266 LRP4O75096 1905 aa7.33□□□□□ -1.24
PDE6A-201ENST00000255266 ZNF324O75467 553 aaPredicted RBP7.33□□□□□ -1.24
PDE6A-201ENST00000255266 HOXD3P31249 432 aaPredicted RBP7.33□□□□□ -1.24
PDE6A-201ENST00000255266 GGTLC1Q9BX51 225 aa7.33□□□□□ -1.24
PDE6A-201ENST00000255266 GSX1Q9H4S2 264 aaPredicted RBP7.33□□□□□ -1.24
PDE6A-201ENST00000255266 A0A1B0GUT8 65 aa7.33□□□□□ -1.24
PDE6A-201ENST00000255266 EIF3GO75821 320 aaKnown RBP eCLIP7.33□□□□□ -1.24
PDE6A-201ENST00000255266 FREM3P0C091 2139 aa7.33□□□□□ -1.24
PDE6A-201ENST00000255266 ZFP36P26651 326 aaKnown RBP7.33□□□□□ -1.24
PDE6A-201ENST00000255266 LMO4P61968 165 aa7.33□□□□□ -1.24
PDE6A-201ENST00000255266 C5orf56Q8N8D9 126 aa7.33□□□□□ -1.24
PDE6A-201ENST00000255266 OR8A1Q8NGG7 326 aa7.33□□□□□ -1.24
PDE6A-201ENST00000255266 PARLQ9H300 379 aa7.33□□□□□ -1.24
PDE6A-201ENST00000255266 LOC102724200A0A096LPH7 203 aaPredicted RBP7.33□□□□□ -1.24
PDE6A-201ENST00000255266 A6NDX4 124 aa7.33□□□□□ -1.24
PDE6A-201ENST00000255266 RPLP1P05386 114 aaKnown RBP7.33□□□□□ -1.24
PDE6A-201ENST00000255266 PKIGQ9Y2B9 76 aa7.33□□□□□ -1.24
PDE6A-201ENST00000255266 TRAV34A0A0B4J273 112 aa7.33□□□□□ -1.24
PDE6A-201ENST00000255266 IGKV3OR2-268A0A0C4DH90 116 aa7.33□□□□□ -1.24
PDE6A-201ENST00000255266 PMS2P5A8MQ11 134 aa7.33□□□□□ -1.24
PDE6A-201ENST00000255266 A0A087WX48 190 aa7.32□□□□□ -1.24
PDE6A-201ENST00000255266 VAMP3Q15836 100 aa7.32□□□□□ -1.24
PDE6A-201ENST00000255266 TMEM183BQ1AE95 376 aa7.32□□□□□ -1.24
PDE6A-201ENST00000255266 SCGB1D4Q6XE38 83 aa7.32□□□□□ -1.24
PDE6A-201ENST00000255266 TMEM183AQ8IXX5 376 aa7.32□□□□□ -1.24
PDE6A-201ENST00000255266 SRRM4A7MD48 611 aaKnown RBP7.32□□□□□ -1.24
PDE6A-201ENST00000255266 C8orf86Q6ZUL3 223 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms