RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 OR4C13Q8NGP0 309 aa12.92□□□□□ -0.34
SLC6A8-201ENST00000253122 COL25A1Q9BXS0 654 aaPredicted RBP12.92□□□□□ -0.34
SLC6A8-201ENST00000253122 TCRBV4S1A1TA0A5B7 111 aa12.91□□□□□ -0.34
SLC6A8-201ENST00000253122 RPL27AP46776 148 aaKnown RBP12.91□□□□□ -0.34
SLC6A8-201ENST00000253122 CACNG7P62955 275 aa12.91□□□□□ -0.34
SLC6A8-201ENST00000253122 DUX4L9Q6RFH8 374 aaPredicted RBP12.91□□□□□ -0.34
SLC6A8-201ENST00000253122 FRYQ5TBA9 3013 aa12.91□□□□□ -0.34
SLC6A8-201ENST00000253122 LOC105371242A0A075B767 164 aa12.91□□□□□ -0.34
SLC6A8-201ENST00000253122 IGKV1OR2-108A0A075B7D4 117 aa12.91□□□□□ -0.34
SLC6A8-201ENST00000253122 ZNF207O43670 478 aaKnown RBP12.91□□□□□ -0.34
SLC6A8-201ENST00000253122 COX7A1P24310 79 aa12.91□□□□□ -0.34
SLC6A8-201ENST00000253122 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.91□□□□□ -0.34
SLC6A8-201ENST00000253122 ZNF414Q96IQ9 312 aa12.91□□□□□ -0.34
SLC6A8-201ENST00000253122 COL5A1P20908 1838 aaPredicted RBP12.9□□□□□ -0.34
SLC6A8-201ENST00000253122 SAP30O75446 220 aa12.9□□□□□ -0.34
SLC6A8-201ENST00000253122 TNFRSF1AP19438 455 aa12.9□□□□□ -0.34
SLC6A8-201ENST00000253122 RNFT1Q5M7Z0 435 aa12.9□□□□□ -0.34
SLC6A8-201ENST00000253122 ZCCHC24Q8N2G6 241 aaKnown RBP12.9□□□□□ -0.34
SLC6A8-201ENST00000253122 OSR1Q8TAX0 266 aaPredicted RBP12.9□□□□□ -0.34
SLC6A8-201ENST00000253122 SLC25A2Q9BXI2 301 aa12.9□□□□□ -0.34
SLC6A8-201ENST00000253122 EXOC3-AS1Q8N2X6 119 aa12.9□□□□□ -0.34
SLC6A8-201ENST00000253122 TEX45Q8NA69 505 aa12.9□□□□□ -0.34
SLC6A8-201ENST00000253122 ZNF714Q96N38 554 aa12.9□□□□□ -0.34
SLC6A8-201ENST00000253122 SRRM4A7MD48 611 aaKnown RBP12.9□□□□□ -0.35
SLC6A8-201ENST00000253122 OR2J3O76001 311 aa12.9□□□□□ -0.35
SLC6A8-201ENST00000253122 ATP5IP56385 69 aaPredicted RBP12.9□□□□□ -0.35
SLC6A8-201ENST00000253122 Q8N976 141 aa12.9□□□□□ -0.35
SLC6A8-201ENST00000253122 C9orf106Q8NAJ2 232 aa12.9□□□□□ -0.35
SLC6A8-201ENST00000253122 ZNF257Q9Y2Q1 563 aa12.9□□□□□ -0.35
SLC6A8-201ENST00000253122 TAX1BP3O14907 124 aa12.89□□□□□ -0.35
SLC6A8-201ENST00000253122 TOMM40O96008 361 aa12.89□□□□□ -0.35
SLC6A8-201ENST00000253122 ORM1P02763 201 aa12.89□□□□□ -0.35
SLC6A8-201ENST00000253122 SSBP2P81877 361 aaPredicted RBP12.89□□□□□ -0.35
SLC6A8-201ENST00000253122 TWIST1Q15672 202 aa12.89□□□□□ -0.35
SLC6A8-201ENST00000253122 HIF1ANQ9NWT6 349 aa12.89□□□□□ -0.35
SLC6A8-201ENST00000253122 S4R3C0 116 aa12.89□□□□□ -0.35
SLC6A8-201ENST00000253122 COL6A3P12111 3177 aa12.89□□□□□ -0.35
SLC6A8-201ENST00000253122 TRAV8-6A0A0B4J262 113 aa12.89□□□□□ -0.35
SLC6A8-201ENST00000253122 H0YJW9 148 aa12.89□□□□□ -0.35
SLC6A8-201ENST00000253122 SS18L1O75177 396 aaPredicted RBP12.89□□□□□ -0.35
SLC6A8-201ENST00000253122 MS4A6AQ9H2W1 248 aa12.89□□□□□ -0.35
SLC6A8-201ENST00000253122 MALRD1Q5VYJ5 2156 aa12.89□□□□□ -0.35
SLC6A8-201ENST00000253122 FRYLO94915 3013 aa12.89□□□□□ -0.35
SLC6A8-201ENST00000253122 JKAMPQ9P055 326 aa12.89□□□□□ -0.35
SLC6A8-201ENST00000253122 A0A0G2JLM5 398 aa12.88□□□□□ -0.35
SLC6A8-201ENST00000253122 UTF1Q5T230 341 aa12.88□□□□□ -0.35
SLC6A8-201ENST00000253122 FMC1Q96HJ9 113 aa12.88□□□□□ -0.35
SLC6A8-201ENST00000253122 PRELID3AQ96N28 172 aa12.88□□□□□ -0.35
SLC6A8-201ENST00000253122 TRAV17A0A0B4J275 112 aa12.88□□□□□ -0.35
SLC6A8-201ENST00000253122 TMEM189A5PLL7 270 aa12.88□□□□□ -0.35
SLC6A8-201ENST00000253122 K7EP13 123 aa12.88□□□□□ -0.35
SLC6A8-201ENST00000253122 SEC11AP67812 179 aa12.88□□□□□ -0.35
SLC6A8-201ENST00000253122 DEFB109BQ30KR1 87 aa12.88□□□□□ -0.35
SLC6A8-201ENST00000253122 GDF5OSQ5U4N7 250 aa12.88□□□□□ -0.35
SLC6A8-201ENST00000253122 SOX21Q9Y651 276 aaPredicted RBP12.88□□□□□ -0.35
SLC6A8-201ENST00000253122 IGHV1-18A0A0C4DH31 117 aa12.88□□□□□ -0.35
SLC6A8-201ENST00000253122 DEFB125Q8N687 156 aa12.88□□□□□ -0.35
SLC6A8-201ENST00000253122 ZNF503Q96F45 646 aa12.88□□□□□ -0.35
SLC6A8-201ENST00000253122 SPOCK3Q9BQ16 436 aa12.88□□□□□ -0.35
SLC6A8-201ENST00000253122 WDFY4Q6ZS81 3184 aa12.87□□□□□ -0.35
SLC6A8-201ENST00000253122 C2orf70A6NJV1 201 aa12.87□□□□□ -0.35
SLC6A8-201ENST00000253122 SMAGPQ0VAQ4 97 aa12.87□□□□□ -0.35
SLC6A8-201ENST00000253122 SFTA2Q6UW10 78 aa12.87□□□□□ -0.35
SLC6A8-201ENST00000253122 FAM90A1Q86YD7 464 aa12.87□□□□□ -0.35
SLC6A8-201ENST00000253122 F2RL2O00254 374 aa12.87□□□□□ -0.35
SLC6A8-201ENST00000253122 NKX2-8O15522 239 aa12.87□□□□□ -0.35
SLC6A8-201ENST00000253122 LOXL3P58215 753 aa12.87□□□□□ -0.35
SLC6A8-201ENST00000253122 FER1L6-AS1Q8NA97 138 aa12.87□□□□□ -0.35
SLC6A8-201ENST00000253122 INSIG2Q9Y5U4 225 aa12.87□□□□□ -0.35
SLC6A8-201ENST00000253122 TCRAP04437 139 aa12.86□□□□□ -0.35
SLC6A8-201ENST00000253122 FCGR2BP31994 310 aaPredicted RBP12.86□□□□□ -0.35
SLC6A8-201ENST00000253122 KIR3DS1Q14943 382 aa12.86□□□□□ -0.35
SLC6A8-201ENST00000253122 IGLV2-8P01709 118 aa12.86□□□□□ -0.35
SLC6A8-201ENST00000253122 SMIM13P0DJ93 91 aa12.86□□□□□ -0.35
SLC6A8-201ENST00000253122 ZADH2Q8N4Q0 377 aa12.86□□□□□ -0.35
SLC6A8-201ENST00000253122 ARMS2P0C7Q2 107 aa12.85□□□□□ -0.35
SLC6A8-201ENST00000253122 SAMD13Q5VXD3 122 aa12.85□□□□□ -0.35
SLC6A8-201ENST00000253122 FAM231DQ6ZW35 169 aa12.85□□□□□ -0.35
SLC6A8-201ENST00000253122 IGF2BP2-AS1Q96M15 143 aa12.85□□□□□ -0.35
SLC6A8-201ENST00000253122 SCNM1Q9BWG6 230 aa12.85□□□□□ -0.35
SLC6A8-201ENST00000253122 RPUSD1Q9UJJ7 312 aaKnown RBP12.85□□□□□ -0.35
SLC6A8-201ENST00000253122 MBNL2Q5VZF2 373 aaKnown RBP12.85□□□□□ -0.35
SLC6A8-201ENST00000253122 PRSS57Q6UWY2 283 aa12.85□□□□□ -0.35
SLC6A8-201ENST00000253122 RPEQ96AT9 228 aa12.85□□□□□ -0.35
SLC6A8-201ENST00000253122 IGHV3-35A0A0C4DH35 117 aa12.85□□□□□ -0.35
SLC6A8-201ENST00000253122 A0A1W2PNU3 283 aaPredicted RBP12.85□□□□□ -0.35
SLC6A8-201ENST00000253122 GTSF1LQ9H1H1 148 aa12.85□□□□□ -0.35
SLC6A8-201ENST00000253122 EXPH5Q8NEV8 1989 aa12.85□□□□□ -0.35
SLC6A8-201ENST00000253122 ANKRD39Q53RE8 183 aa12.84□□□□□ -0.35
SLC6A8-201ENST00000253122 KIR2DL2P43627 348 aaPredicted RBP12.84□□□□□ -0.35
SLC6A8-201ENST00000253122 EIF4EBP1Q13541 118 aaPredicted RBP12.84□□□□□ -0.35
SLC6A8-201ENST00000253122 PIP4P1Q86T03 277 aa12.84□□□□□ -0.35
SLC6A8-201ENST00000253122 OR1N2Q8NGR9 330 aa12.84□□□□□ -0.35
SLC6A8-201ENST00000253122 J3KRW8 73 aa12.84□□□□□ -0.35
SLC6A8-201ENST00000253122 IFI27P40305 119 aaPredicted RBP12.84□□□□□ -0.35
SLC6A8-201ENST00000253122 C17orf58Q2M2W7 97 aa12.84□□□□□ -0.35
SLC6A8-201ENST00000253122 FNDC10F2Z333 226 aa12.83□□□□□ -0.35
SLC6A8-201ENST00000253122 KLF5Q13887 457 aaPredicted RBP12.83□□□□□ -0.35
SLC6A8-201ENST00000253122 OR5AN1Q8NGI8 311 aa12.83□□□□□ -0.35
SLC6A8-201ENST00000253122 NDFIP1Q9BT67 221 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms