RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 A0A1W2PS18 150 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 GPR183P32249 361 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 TMEM200BQ69YZ2 307 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 JMJD1CQ15652 2540 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 DLEU1O43261 78 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 TYMSP04818 313 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 ZNF474Q6S9Z5 364 aaPredicted RBP3.76□□□□□ -1.81
VPS13C-201ENST00000249837 C11orf53Q8IXP5 236 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 TMEM160Q9NX00 188 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 LSM4Q9Y4Z0 139 aaKnown RBP3.76□□□□□ -1.81
VPS13C-201ENST00000249837 CRIP3Q6Q6R5 217 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 ZNF502Q8TBZ5 544 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 FAM106CPP0CH98 169 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 SMIM13P0DJ93 91 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 PF4V1P10720 104 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 ERVK11-1P61568 191 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 SPRNQ5BIV9 151 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 SCGB1D4Q6XE38 83 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 RABAC1Q9UI14 185 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 DLX1P56177 255 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 FXYD7P58549 80 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 RPS20P60866 119 aaKnown RBP3.76□□□□□ -1.81
VPS13C-201ENST00000249837 KRTAP27-1Q3LI81 207 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 Q6ZPA2 131 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 ZNF788Q6ZQV5 615 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 ZNF329Q86UD4 541 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 C15orf65H3BRN8 121 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 PLP1P60201 277 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 RPL15P61313 204 aaKnown RBP3.76□□□□□ -1.81
VPS13C-201ENST00000249837 A0A087X0K7 114 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 C20orf144Q9BQM9 153 aa3.76□□□□□ -1.81
VPS13C-201ENST00000249837 IGKV2-40A0A087WW87 121 aaPredicted RBP3.75□□□□□ -1.81
VPS13C-201ENST00000249837 IGKV2D-40P01614 121 aaPredicted RBP3.75□□□□□ -1.81
VPS13C-201ENST00000249837 FRMD6-AS1P0C7T7 363 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 LMO1P25800 156 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 SLC25A48Q6ZT89 311 aaKnown RBP3.75□□□□□ -1.81
VPS13C-201ENST00000249837 IFI27L1Q96BM0 104 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 METTL26Q96S19 204 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 FOXC2Q99958 501 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 C21orf62Q9NYP8 219 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 H7C2G1 150 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 SRSF9Q13242 221 aaKnown RBP eCLIP3.75□□□□□ -1.81
VPS13C-201ENST00000249837 GGTLC3B5MD39 225 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 BMI1P35226 326 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 PSG9Q00887 426 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 LY6EQ16553 131 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 LYPD2Q6UXB3 125 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 DPM3Q9P2X0 92 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 H0YJW9 148 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 ZNF134P52741 427 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 CACNG7P62955 275 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 TMEM78Q5T7P6 136 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 OR10J6PQ8NGY7 276 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 C11orf1Q9H5F2 150 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 POLQO75417 2590 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 M0R381 172 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 RIPPLY3P57055 190 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 LDLRAD2Q5SZI1 272 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 FAM168AQ92567 244 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 K7EN84 100 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 HIST1H4GQ99525 98 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 LRRK2Q5S007 2527 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 LOC107984156A0A0G2JMH3 177 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 FAM181BA6NEQ2 426 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 Q6ZVH6 145 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 ARL17AQ8IVW1 177 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 ORMDL3Q8N138 153 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 STPG4Q8N801 248 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 TMEM167AQ8TBQ9 72 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 IGFBPL1Q8WX77 278 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 SRRM4A7MD48 611 aaKnown RBP3.75□□□□□ -1.81
VPS13C-201ENST00000249837 LY6HO94772 140 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 TSPOP30536 169 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 C17orf58Q2M2W7 97 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 OR5AN1Q8NGI8 311 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 WISP2O76076 250 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 IGKV3-20P01619 116 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 PSMB2P49721 201 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 V9GYV3 84 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 B9A039 149 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 NDUFA3O95167 84 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 MPV17L2Q567V2 206 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 LY96Q9Y6Y9 160 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 Q0VG73 95 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 Q6ZSR3 168 aa3.75□□□□□ -1.81
VPS13C-201ENST00000249837 TRBV20OR9-2A0A075B6H5 130 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 A0A1W2PPI3 338 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 LEPP41159 167 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 SSBP2P81877 361 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-201ENST00000249837 COA6Q5JTJ3 125 aaKnown RBP3.74□□□□□ -1.81
VPS13C-201ENST00000249837 FAM71F2Q6NXP2 309 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 GLMPQ8WWB7 406 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 FMC1Q96HJ9 113 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 PLSCR4Q9NRQ2 329 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 TRAV8-6A0A0B4J262 113 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 M0R3E3 92 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 LINC00614P0C842 121 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 RPRMLQ8N4K4 120 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 RNASE6Q93091 150 aaKnown RBP3.74□□□□□ -1.81
VPS13C-201ENST00000249837 PSG1P11464 419 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 230.3 ms