RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 FAM231DQ6ZW35 169 aa11.95□□□□□ -0.5
DDX49-201ENST00000247003 CMTM2Q8TAZ6 248 aa11.95□□□□□ -0.5
DDX49-201ENST00000247003 ZNF48Q96MX3 618 aaPredicted RBP11.95□□□□□ -0.5
DDX49-201ENST00000247003 CCL19Q99731 98 aa11.95□□□□□ -0.5
DDX49-201ENST00000247003 MRPL18Q9H0U6 180 aaKnown RBP11.95□□□□□ -0.5
DDX49-201ENST00000247003 OTORQ9NRC9 128 aa11.95□□□□□ -0.5
DDX49-201ENST00000247003 MRPL27Q9P0M9 148 aaKnown RBP11.95□□□□□ -0.5
DDX49-201ENST00000247003 IER3P46695 156 aa11.94□□□□□ -0.5
DDX49-201ENST00000247003 FBLN7Q53RD9 439 aa11.94□□□□□ -0.5
DDX49-201ENST00000247003 KLF17Q5JT82 389 aaPredicted RBP11.94□□□□□ -0.5
DDX49-201ENST00000247003 SHANK2-AS3Q9BTD1 123 aa11.94□□□□□ -0.5
DDX49-201ENST00000247003 GNB1LQ9BYB4 327 aa11.94□□□□□ -0.5
DDX49-201ENST00000247003 H3BRN7 92 aa11.93□□□□□ -0.5
DDX49-201ENST00000247003 IGHV4-39P01824 125 aa11.93□□□□□ -0.5
DDX49-201ENST00000247003 NDPQ00604 133 aa11.93□□□□□ -0.5
DDX49-201ENST00000247003 ASPHD1Q5U4P2 390 aa11.93□□□□□ -0.5
DDX49-201ENST00000247003 PRR27Q6MZM9 219 aa11.93□□□□□ -0.5
DDX49-201ENST00000247003 GPR82Q96P67 336 aa11.93□□□□□ -0.5
DDX49-201ENST00000247003 GSN-AS1Q9NRJ2 163 aa11.93□□□□□ -0.5
DDX49-201ENST00000247003 C21orf62Q9NYP8 219 aa11.93□□□□□ -0.5
DDX49-201ENST00000247003 SMIM27A0A1W2PRY6 76 aa11.93□□□□□ -0.5
DDX49-201ENST00000247003 HLA-DRB1P01911 266 aa11.93□□□□□ -0.5
DDX49-201ENST00000247003 AMBPP02760 352 aa11.93□□□□□ -0.5
DDX49-201ENST00000247003 TCRAP04437 139 aa11.93□□□□□ -0.5
DDX49-201ENST00000247003 TCL1AP56279 114 aa11.93□□□□□ -0.5
DDX49-201ENST00000247003 USF2Q15853 346 aaPredicted RBP11.93□□□□□ -0.5
DDX49-201ENST00000247003 DNLZQ5SXM8 178 aa11.93□□□□□ -0.5
DDX49-201ENST00000247003 FANCD2OSQ96PS1 177 aa11.93□□□□□ -0.5
DDX49-201ENST00000247003 KLF12Q9Y4X4 402 aa11.93□□□□□ -0.5
DDX49-201ENST00000247003 H3BTX0 84 aa11.92□□□□□ -0.5
DDX49-201ENST00000247003 NPFFO15130 113 aa11.92□□□□□ -0.5
DDX49-201ENST00000247003 AMY1AP04745 511 aa11.92□□□□□ -0.5
DDX49-201ENST00000247003 ZNF491Q8N8L2 437 aa11.92□□□□□ -0.5
DDX49-201ENST00000247003 Q8N9W7 124 aa11.92□□□□□ -0.5
DDX49-201ENST00000247003 FAM168AQ92567 244 aa11.92□□□□□ -0.5
DDX49-201ENST00000247003 GRAMD2BQ96HH9 432 aa11.92□□□□□ -0.5
DDX49-201ENST00000247003 EPG5Q9HCE0 2579 aa11.91□□□□□ -0.5
DDX49-201ENST00000247003 IGHV7-81A0A0B4J1V7 117 aa11.91□□□□□ -0.5
DDX49-201ENST00000247003 IZUMO1RA6ND01 250 aa11.91□□□□□ -0.5
DDX49-201ENST00000247003 RAB4BP61018 213 aa11.91□□□□□ -0.5
DDX49-201ENST00000247003 ZNF586Q9NXT0 402 aa11.91□□□□□ -0.5
DDX49-201ENST00000247003 NAT8BQ9UHF3 227 aa11.91□□□□□ -0.5
DDX49-201ENST00000247003 S4R3C0 116 aa11.91□□□□□ -0.5
DDX49-201ENST00000247003 CFAP46Q8IYW2 2715 aa11.91□□□□□ -0.5
DDX49-201ENST00000247003 WI2-2373I1.2A0A1W2PRP0 233 aa11.9□□□□□ -0.5
DDX49-201ENST00000247003 K7EQM0 130 aa11.9□□□□□ -0.5
DDX49-201ENST00000247003 SPINK4O60575 86 aa11.9□□□□□ -0.5
DDX49-201ENST00000247003 OR2J3O76001 311 aa11.9□□□□□ -0.5
DDX49-201ENST00000247003 CRISP2P16562 243 aa11.9□□□□□ -0.5
DDX49-201ENST00000247003 S100A7P31151 101 aa11.9□□□□□ -0.5
DDX49-201ENST00000247003 GBGT1Q8N5D6 347 aa11.9□□□□□ -0.5
DDX49-201ENST00000247003 ZNF331Q9NQX6 463 aaPredicted RBP11.9□□□□□ -0.5
DDX49-201ENST00000247003 POLR3KQ9Y2Y1 108 aaPredicted RBP11.9□□□□□ -0.5
DDX49-201ENST00000247003 DCHS2Q6V1P9 2916 aa11.9□□□□□ -0.5
DDX49-201ENST00000247003 SPTBN1Q01082 2364 aaKnown RBP11.9□□□□□ -0.5
DDX49-201ENST00000247003 NDUFS8O00217 210 aa11.9□□□□□ -0.5
DDX49-201ENST00000247003 HLA-DQA1P01909 254 aa11.9□□□□□ -0.5
DDX49-201ENST00000247003 FCGR2BP31994 310 aaPredicted RBP11.9□□□□□ -0.5
DDX49-201ENST00000247003 FAM120AOSQ5T036 256 aa11.9□□□□□ -0.5
DDX49-201ENST00000247003 MRPL54Q6P161 138 aaKnown RBP11.9□□□□□ -0.5
DDX49-201ENST00000247003 CLEC2AQ6UVW9 174 aa11.9□□□□□ -0.5
DDX49-201ENST00000247003 LYPD1Q8N2G4 141 aa11.9□□□□□ -0.5
DDX49-201ENST00000247003 NUDT10Q8NFP7 164 aa11.9□□□□□ -0.5
DDX49-201ENST00000247003 NUDT11Q96G61 164 aa11.9□□□□□ -0.5
DDX49-201ENST00000247003 TXN2Q99757 166 aa11.9□□□□□ -0.5
DDX49-201ENST00000247003 TMUB1Q9BVT8 246 aa11.9□□□□□ -0.5
DDX49-201ENST00000247003 LTAP01374 205 aa11.89□□□□□ -0.51
DDX49-201ENST00000247003 SLC35B1P78383 322 aa11.89□□□□□ -0.51
DDX49-201ENST00000247003 RASL11AQ6T310 242 aa11.89□□□□□ -0.51
DDX49-201ENST00000247003 FAM110DQ8TAY7 271 aaPredicted RBP11.89□□□□□ -0.51
DDX49-201ENST00000247003 DAZAP1Q96EP5 407 aaKnown RBP11.89□□□□□ -0.51
DDX49-201ENST00000247003 SGK494Q96LW2 274 aa11.89□□□□□ -0.51
DDX49-201ENST00000247003 FBXL7Q9UJT9 491 aa11.89□□□□□ -0.51
DDX49-201ENST00000247003 TRBV19A0A075B6N1 114 aa11.88□□□□□ -0.51
DDX49-201ENST00000247003 GRIFINA4D1Z8 144 aa11.88□□□□□ -0.51
DDX49-201ENST00000247003 NDUFB8O95169 186 aa11.88□□□□□ -0.51
DDX49-201ENST00000247003 CA1P00915 261 aaPredicted RBP11.88□□□□□ -0.51
DDX49-201ENST00000247003 ECSCRQ19T08 205 aa11.88□□□□□ -0.51
DDX49-201ENST00000247003 UNQ5815/PRO19632Q6UWF5 114 aa11.88□□□□□ -0.51
DDX49-201ENST00000247003 Q86TA4 180 aa11.88□□□□□ -0.51
DDX49-201ENST00000247003 OR5R1Q8NH85 324 aa11.88□□□□□ -0.51
DDX49-201ENST00000247003 JOSD1Q15040 202 aaPredicted RBP11.88□□□□□ -0.51
DDX49-201ENST00000247003 EXOC3-AS1Q8N2X6 119 aa11.88□□□□□ -0.51
DDX49-201ENST00000247003 VN1R17PQ8TDU5 208 aa11.88□□□□□ -0.51
DDX49-201ENST00000247003 TSKUQ8WUA8 353 aa11.88□□□□□ -0.51
DDX49-201ENST00000247003 AAMDCQ9H7C9 122 aa11.88□□□□□ -0.51
DDX49-201ENST00000247003 ZNF492Q9P255 531 aa11.88□□□□□ -0.51
DDX49-201ENST00000247003 CENPVL3A0A0U1RRI6 287 aa11.87□□□□□ -0.51
DDX49-201ENST00000247003 OR2T8A6NH00 312 aa11.87□□□□□ -0.51
DDX49-201ENST00000247003 P01737 135 aa11.87□□□□□ -0.51
DDX49-201ENST00000247003 IGLC2P0DOY2 106 aa11.87□□□□□ -0.51
DDX49-201ENST00000247003 PDE6HQ13956 83 aa11.87□□□□□ -0.51
DDX49-201ENST00000247003 TMEM136Q6ZRR5 245 aa11.87□□□□□ -0.51
DDX49-201ENST00000247003 GOLT1AQ6ZVE7 132 aa11.87□□□□□ -0.51
DDX49-201ENST00000247003 BAGE3Q86Y29 109 aa11.87□□□□□ -0.51
DDX49-201ENST00000247003 MBD6Q96DN6 1003 aa11.87□□□□□ -0.51
DDX49-201ENST00000247003 HSPB9Q9BQS6 159 aa11.87□□□□□ -0.51
DDX49-201ENST00000247003 MLST8Q9BVC4 326 aa11.87□□□□□ -0.51
DDX49-201ENST00000247003 RPP21Q9H633 154 aaKnown RBP11.87□□□□□ -0.51
DDX49-201ENST00000247003 C7orf69Q9H7B7 122 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms