RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 BRD3OSQ6XYD6 125 aa8.52□□□□□ -1.04
SLF2-201ENST00000238961 FANCMQ8IYD8 2048 aa8.52□□□□□ -1.04
SLF2-201ENST00000238961 C12orf77C9JDV5 145 aa8.52□□□□□ -1.05
SLF2-201ENST00000238961 COX5BP10606 129 aa8.52□□□□□ -1.05
SLF2-201ENST00000238961 C17orf77Q96MU5 243 aa8.52□□□□□ -1.05
SLF2-201ENST00000238961 MIXL1Q9H2W2 232 aa8.52□□□□□ -1.05
SLF2-201ENST00000238961 NUP214P35658 2090 aaPredicted RBP8.52□□□□□ -1.05
SLF2-201ENST00000238961 TRAV9-1A0A075B6T8 112 aa8.52□□□□□ -1.05
SLF2-201ENST00000238961 GAGE12BA1L429 117 aa8.52□□□□□ -1.05
SLF2-201ENST00000238961 GAGE7O76087 117 aa8.52□□□□□ -1.05
SLF2-201ENST00000238961 GAGE12FP0CL80 117 aa8.52□□□□□ -1.05
SLF2-201ENST00000238961 GAGE12GP0CL81 117 aa8.52□□□□□ -1.05
SLF2-201ENST00000238961 GAGE12IP0CL82 117 aa8.52□□□□□ -1.05
SLF2-201ENST00000238961 PAX9P55771 341 aa8.52□□□□□ -1.05
SLF2-201ENST00000238961 IGF2BP2-AS1Q96M15 143 aa8.52□□□□□ -1.05
SLF2-201ENST00000238961 ARID2Q68CP9 1835 aa8.52□□□□□ -1.05
SLF2-201ENST00000238961 CD160O95971 181 aa8.52□□□□□ -1.05
SLF2-201ENST00000238961 UBE2AP49459 152 aa8.52□□□□□ -1.05
SLF2-201ENST00000238961 NABP1Q96AH0 204 aa8.52□□□□□ -1.05
SLF2-201ENST00000238961 BRCA1P38398 1863 aaKnown RBP8.52□□□□□ -1.05
SLF2-201ENST00000238961 IGKV1-5P01602 117 aa8.51□□□□□ -1.05
SLF2-201ENST00000238961 ATP6V0BQ99437 205 aa8.51□□□□□ -1.05
SLF2-201ENST00000238961 SAA2-SAA4A0A096LPE2 208 aa8.51□□□□□ -1.05
SLF2-201ENST00000238961 IGHV2OR16-5A0A0B4J2B6 119 aa8.51□□□□□ -1.05
SLF2-201ENST00000238961 IGHG2P01859 326 aa8.51□□□□□ -1.05
SLF2-201ENST00000238961 SAA2P0DJI9 122 aaPredicted RBP8.51□□□□□ -1.05
SLF2-201ENST00000238961 FSTP19883 344 aa8.51□□□□□ -1.05
SLF2-201ENST00000238961 DEFB131AP59861 70 aa8.51□□□□□ -1.05
SLF2-201ENST00000238961 AQP3Q92482 292 aa8.51□□□□□ -1.05
SLF2-201ENST00000238961 Q96M66 194 aa8.51□□□□□ -1.05
SLF2-201ENST00000238961 C5orf66Q9H5L9 145 aa8.51□□□□□ -1.05
SLF2-201ENST00000238961 PROP1O75360 226 aa8.51□□□□□ -1.05
SLF2-201ENST00000238961 IGLV3-25P01717 112 aa8.51□□□□□ -1.05
SLF2-201ENST00000238961 AZU1P20160 251 aa8.51□□□□□ -1.05
SLF2-201ENST00000238961 ANK1P16157 1881 aa8.51□□□□□ -1.05
SLF2-201ENST00000238961 PDCD11Q14690 1871 aaKnown RBP8.51□□□□□ -1.05
SLF2-201ENST00000238961 VSIRQ9H7M9 311 aa8.51□□□□□ -1.05
SLF2-201ENST00000238961 FUSP35637 526 aaKnown RBP eCLIP8.51□□□□□ -1.05
SLF2-201ENST00000238961 B4DSR2 109 aa8.51□□□□□ -1.05
SLF2-201ENST00000238961 PRR31Q5SQ13 230 aa8.51□□□□□ -1.05
SLF2-201ENST00000238961 RALGAPA1Q6GYQ0 2036 aa8.5□□□□□ -1.05
SLF2-201ENST00000238961 IGKV1D-16P01601 117 aa8.5□□□□□ -1.05
SLF2-201ENST00000238961 ZNF138P52744 262 aa8.5□□□□□ -1.05
SLF2-201ENST00000238961 GUSBP1Q15486 140 aa8.5□□□□□ -1.05
SLF2-201ENST00000238961 ZNF660Q6AZW8 331 aaPredicted RBP8.5□□□□□ -1.05
SLF2-201ENST00000238961 A0A1W2PRE2 83 aa8.5□□□□□ -1.05
SLF2-201ENST00000238961 ZCCHC24Q8N2G6 241 aaKnown RBP8.5□□□□□ -1.05
SLF2-201ENST00000238961 LHFPL6Q9Y693 200 aa8.5□□□□□ -1.05
SLF2-201ENST00000238961 CACNA1GO43497 2377 aa8.5□□□□□ -1.05
SLF2-201ENST00000238961 MYOFQ9NZM1 2061 aa8.5□□□□□ -1.05
SLF2-201ENST00000238961 FOXS1O43638 330 aa8.5□□□□□ -1.05
SLF2-201ENST00000238961 PMS2P5A8MQ11 134 aa8.5□□□□□ -1.05
SLF2-201ENST00000238961 COX6A1P12074 109 aa8.5□□□□□ -1.05
SLF2-201ENST00000238961 IGLV3-16A0A075B6K0 115 aa8.5□□□□□ -1.05
SLF2-201ENST00000238961 TRBV20-1A0A075B6N2 111 aa8.5□□□□□ -1.05
SLF2-201ENST00000238961 SYNJ2BPP57105 145 aa8.5□□□□□ -1.05
SLF2-201ENST00000238961 RIPPLY2Q5TAB7 128 aa8.5□□□□□ -1.05
SLF2-201ENST00000238961 GPHB5Q86YW7 130 aa8.5□□□□□ -1.05
SLF2-201ENST00000238961 LINC00477Q96M19 166 aa8.5□□□□□ -1.05
SLF2-201ENST00000238961 LIME1Q9H400 295 aa8.5□□□□□ -1.05
SLF2-201ENST00000238961 RNASE2P10153 161 aaKnown RBP8.49□□□□□ -1.05
SLF2-201ENST00000238961 TRPM7Q96QT4 1865 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 TRBV7-1A0A0A6YYK4 115 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 A0A1B0GX51 115 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 FXYD1O00168 92 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 LINC01559Q495D7 138 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 UTF1Q5T230 341 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 GAGE12HA6NDE8 117 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 CCL20P78556 96 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 TMEM243Q9BU79 118 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 PI4KAP42356 2102 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 SIPA1L1O43166 1804 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 BUB3O43684 328 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 PSG3Q16557 428 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 LYZL1Q6UWQ5 148 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 TRPT1Q86TN4 253 aaKnown RBP8.49□□□□□ -1.05
SLF2-201ENST00000238961 BMPERQ8N8U9 685 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 SPTBN1Q01082 2364 aaKnown RBP8.49□□□□□ -1.05
SLF2-201ENST00000238961 EXOC3-AS1Q8N2X6 119 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 TMEM52Q8NDY8 209 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 SPTSSBQ8NFR3 76 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 SHISA9B4DS77 424 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 RHODO00212 210 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 IGKV4-1P06312 121 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 ADAMTSL5Q6ZMM2 481 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 PILRAQ9UKJ1 303 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 ABCA1O95477 2261 aa8.49□□□□□ -1.05
SLF2-201ENST00000238961 A6NNC1 897 aa8.48□□□□□ -1.05
SLF2-201ENST00000238961 DKK1O94907 266 aa8.48□□□□□ -1.05
SLF2-201ENST00000238961 ACYP1P07311 99 aa8.48□□□□□ -1.05
SLF2-201ENST00000238961 CD300CQ08708 224 aa8.48□□□□□ -1.05
SLF2-201ENST00000238961 MBNL3Q9NUK0 354 aaKnown RBP8.48□□□□□ -1.05
SLF2-201ENST00000238961 A0A087X0K7 114 aa8.48□□□□□ -1.05
SLF2-201ENST00000238961 KIAA0040Q15053 153 aa8.48□□□□□ -1.05
SLF2-201ENST00000238961 LINC01465Q8N7H1 131 aa8.48□□□□□ -1.05
SLF2-201ENST00000238961 RNF183Q96D59 192 aa8.48□□□□□ -1.05
SLF2-201ENST00000238961 EP400Q96L91 3159 aa8.48□□□□□ -1.05
SLF2-201ENST00000238961 OR11H6Q8NGC7 330 aa8.48□□□□□ -1.05
SLF2-201ENST00000238961 SDK2Q58EX2 2172 aa8.48□□□□□ -1.05
SLF2-201ENST00000238961 ZNF646O15015 1829 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms