RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 PILRAQ9UKJ1 303 aa11□□□□□ -0.65
NEK9-201ENST00000238616 GNLYP22749 145 aa11□□□□□ -0.65
NEK9-201ENST00000238616 LRRC37AA6NMS7 1700 aa11□□□□□ -0.65
NEK9-201ENST00000238616 F8VVB4 439 aa10.99□□□□□ -0.65
NEK9-201ENST00000238616 F8VWA3 439 aa10.99□□□□□ -0.65
NEK9-201ENST00000238616 Q6AWC8 147 aa10.99□□□□□ -0.65
NEK9-201ENST00000238616 SCRT1Q9BWW7 348 aa10.99□□□□□ -0.65
NEK9-201ENST00000238616 PIP4P2Q8N4L2 257 aa10.99□□□□□ -0.65
NEK9-201ENST00000238616 hADV29S1A0JD25 119 aa10.99□□□□□ -0.65
NEK9-201ENST00000238616 TCRAP04437 139 aa10.99□□□□□ -0.65
NEK9-201ENST00000238616 EPDR1Q9UM22 224 aa10.99□□□□□ -0.65
NEK9-201ENST00000238616 TNS1Q9HBL0 1735 aaKnown RBP10.99□□□□□ -0.65
NEK9-201ENST00000238616 A0A0G2JMZ2 1700 aa10.99□□□□□ -0.65
NEK9-201ENST00000238616 LRRC37A2A6NM11 1700 aa10.99□□□□□ -0.65
NEK9-201ENST00000238616 ORMDL2Q53FV1 153 aa10.99□□□□□ -0.65
NEK9-201ENST00000238616 CD5LO43866 347 aa10.99□□□□□ -0.65
NEK9-201ENST00000238616 NKAPP1Q8N9T2 125 aa10.99□□□□□ -0.65
NEK9-201ENST00000238616 CHCHD2Q9Y6H1 151 aaPredicted RBP10.99□□□□□ -0.65
NEK9-201ENST00000238616 PMS2P5A8MQ11 134 aa10.99□□□□□ -0.65
NEK9-201ENST00000238616 TEX43Q6ZNM6 134 aa10.99□□□□□ -0.65
NEK9-201ENST00000238616 FAM208BQ5VWN6 2430 aa10.98□□□□□ -0.65
NEK9-201ENST00000238616 TRAV41A0A0B4J266 112 aa10.98□□□□□ -0.65
NEK9-201ENST00000238616 DMRTC2Q8IXT2 367 aaPredicted RBP10.98□□□□□ -0.65
NEK9-201ENST00000238616 RPL36AP83881 106 aaKnown RBP10.98□□□□□ -0.65
NEK9-201ENST00000238616 RPL36ALQ969Q0 106 aaKnown RBP10.98□□□□□ -0.65
NEK9-201ENST00000238616 FAM181AQ8N9Y4 354 aa10.98□□□□□ -0.65
NEK9-201ENST00000238616 GSN-AS1Q9NRJ2 163 aa10.98□□□□□ -0.65
NEK9-201ENST00000238616 IGHMP01871 453 aa10.98□□□□□ -0.65
NEK9-201ENST00000238616 WDYHV1Q96HA8 205 aa10.98□□□□□ -0.65
NEK9-201ENST00000238616 H3BUX3 64 aa10.98□□□□□ -0.65
NEK9-201ENST00000238616 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.98□□□□□ -0.65
NEK9-201ENST00000238616 TRBV5-5A0A0J9YX44 114 aa10.98□□□□□ -0.65
NEK9-201ENST00000238616 COX5BP10606 129 aa10.98□□□□□ -0.65
NEK9-201ENST00000238616 NAV3Q8IVL0 2385 aa10.97□□□□□ -0.65
NEK9-201ENST00000238616 TRAV8-3A0A0A6YYJ7 113 aa10.97□□□□□ -0.65
NEK9-201ENST00000238616 NCR2O95944 276 aa10.97□□□□□ -0.65
NEK9-201ENST00000238616 SLC25A39Q9BZJ4 359 aaPredicted RBP10.97□□□□□ -0.65
NEK9-201ENST00000238616 A8MWV9 139 aa10.97□□□□□ -0.65
NEK9-201ENST00000238616 MLNRO43193 412 aa10.97□□□□□ -0.65
NEK9-201ENST00000238616 SSBP2P81877 361 aaPredicted RBP10.97□□□□□ -0.65
NEK9-201ENST00000238616 GAGE2AQ6NT46 116 aa10.97□□□□□ -0.65
NEK9-201ENST00000238616 C15orf61A6NNL5 157 aa10.97□□□□□ -0.65
NEK9-201ENST00000238616 MORN2Q502X0 79 aa10.97□□□□□ -0.65
NEK9-201ENST00000238616 POC1AQ8NBT0 407 aa10.97□□□□□ -0.65
NEK9-201ENST00000238616 SAMD5Q5TGI4 173 aa10.97□□□□□ -0.65
NEK9-201ENST00000238616 ZFAND6Q6FIF0 208 aa10.97□□□□□ -0.65
NEK9-201ENST00000238616 F2Z2F3 143 aa10.97□□□□□ -0.65
NEK9-201ENST00000238616 DMRT1Q9Y5R6 373 aa10.97□□□□□ -0.65
NEK9-201ENST00000238616 A0A087WWL8 130 aa10.97□□□□□ -0.65
NEK9-201ENST00000238616 SPXQ9BT56 116 aa10.97□□□□□ -0.65
NEK9-201ENST00000238616 DKK4Q9UBT3 224 aa10.97□□□□□ -0.65
NEK9-201ENST00000238616 CLPSL2Q6UWE3 100 aa10.96□□□□□ -0.65
NEK9-201ENST00000238616 ZNF837Q96EG3 531 aaPredicted RBP10.96□□□□□ -0.65
NEK9-201ENST00000238616 ZMAT4Q9H898 229 aa10.96□□□□□ -0.65
NEK9-201ENST00000238616 SRCAPQ6ZRS2 3230 aa10.96□□□□□ -0.65
NEK9-201ENST00000238616 C22orf46C9J442 243 aa10.96□□□□□ -0.65
NEK9-201ENST00000238616 SPRR3Q9UBC9 169 aa10.96□□□□□ -0.65
NEK9-201ENST00000238616 A0A1B0GW15 77 aa10.96□□□□□ -0.65
NEK9-201ENST00000238616 TMEM238C9JI98 176 aa10.96□□□□□ -0.65
NEK9-201ENST00000238616 ABCA2Q9BZC7 2435 aa10.96□□□□□ -0.66
NEK9-201ENST00000238616 IGHV3-16A0A0C4DH30 117 aa10.96□□□□□ -0.66
NEK9-201ENST00000238616 SERF1AO75920 110 aa10.96□□□□□ -0.66
NEK9-201ENST00000238616 ATP5L2Q7Z4Y8 100 aa10.96□□□□□ -0.66
NEK9-201ENST00000238616 NMBP08949 121 aa10.96□□□□□ -0.66
NEK9-201ENST00000238616 ATP5IP56385 69 aaPredicted RBP10.96□□□□□ -0.66
NEK9-201ENST00000238616 MBNL3Q9NUK0 354 aaKnown RBP10.96□□□□□ -0.66
NEK9-201ENST00000238616 MRPS18AQ9NVS2 196 aaKnown RBP10.96□□□□□ -0.66
NEK9-201ENST00000238616 RNF114Q9Y508 228 aa10.96□□□□□ -0.66
NEK9-201ENST00000238616 TEX38Q6PEX7 206 aa10.95□□□□□ -0.66
NEK9-201ENST00000238616 C5orf30Q96GV9 206 aa10.95□□□□□ -0.66
NEK9-201ENST00000238616 GAGE13Q4V321 117 aa10.95□□□□□ -0.66
NEK9-201ENST00000238616 MDS2Q8NDY4 140 aa10.95□□□□□ -0.66
NEK9-201ENST00000238616 IQCF6A8MYZ5 107 aa10.95□□□□□ -0.66
NEK9-201ENST00000238616 C4orf51C9J302 202 aa10.95□□□□□ -0.66
NEK9-201ENST00000238616 TGFBR3LH3BV60 316 aa10.95□□□□□ -0.66
NEK9-201ENST00000238616 DAD1P61803 113 aa10.94□□□□□ -0.66
NEK9-201ENST00000238616 PSG8Q9UQ74 426 aa10.94□□□□□ -0.66
NEK9-201ENST00000238616 RAI1Q7Z5J4 1906 aaPredicted RBP10.94□□□□□ -0.66
NEK9-201ENST00000238616 H3BMM0 161 aa10.94□□□□□ -0.66
NEK9-201ENST00000238616 UBE2WQ96B02 151 aa10.94□□□□□ -0.66
NEK9-201ENST00000238616 SIGMAR1Q99720 223 aa10.94□□□□□ -0.66
NEK9-201ENST00000238616 RPUSD1Q9UJJ7 312 aaKnown RBP10.94□□□□□ -0.66
NEK9-201ENST00000238616 ZNF708P17019 499 aa10.94□□□□□ -0.66
NEK9-201ENST00000238616 UCP3P55916 312 aa10.94□□□□□ -0.66
NEK9-201ENST00000238616 IRF3Q14653 427 aa10.94□□□□□ -0.66
NEK9-201ENST00000238616 C2orf82Q6UX34 121 aa10.94□□□□□ -0.66
NEK9-201ENST00000238616 SLC25A38Q96DW6 304 aa10.94□□□□□ -0.66
NEK9-201ENST00000238616 PVRIGQ6DKI7 326 aa10.94□□□□□ -0.66
NEK9-201ENST00000238616 NRN1Q9NPD7 142 aa10.94□□□□□ -0.66
NEK9-201ENST00000238616 MBD3L4A6NDZ8 208 aaPredicted RBP10.94□□□□□ -0.66
NEK9-201ENST00000238616 MBD3L3A6NE82 208 aaPredicted RBP10.94□□□□□ -0.66
NEK9-201ENST00000238616 MBD3L5A6NJ08 208 aaPredicted RBP10.94□□□□□ -0.66
NEK9-201ENST00000238616 MBD3L2Q8NHZ7 208 aaPredicted RBP10.94□□□□□ -0.66
NEK9-201ENST00000238616 TRBV7-1A0A0A6YYK4 115 aa10.94□□□□□ -0.66
NEK9-201ENST00000238616 CSTL1Q9H114 145 aa10.94□□□□□ -0.66
NEK9-201ENST00000238616 IGHV2-26A0A0B4J1V2 119 aa10.93□□□□□ -0.66
NEK9-201ENST00000238616 D6R8Y8 96 aa10.93□□□□□ -0.66
NEK9-201ENST00000238616 FOXF2Q12947 444 aa10.93□□□□□ -0.66
NEK9-201ENST00000238616 HAPLN4Q86UW8 402 aa10.93□□□□□ -0.66
NEK9-201ENST00000238616 DEFB105AQ8NG35 78 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms