RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 RAMP3O60896 148 aa7.71□□□□□ -1.18
CCDC113-201ENST00000219299 DUTP33316 252 aaKnown RBP7.71□□□□□ -1.18
CCDC113-201ENST00000219299 ATP5G3P48201 142 aa7.71□□□□□ -1.18
CCDC113-201ENST00000219299 FBXL19-AS1Q494R0 122 aa7.71□□□□□ -1.18
CCDC113-201ENST00000219299 PYY3Q5JQD4 70 aa7.71□□□□□ -1.18
CCDC113-201ENST00000219299 SYT8Q8NBV8 401 aa7.71□□□□□ -1.18
CCDC113-201ENST00000219299 MRPL16Q9NX20 251 aaKnown RBP7.71□□□□□ -1.18
CCDC113-201ENST00000219299 ZNF843Q8N446 348 aa7.71□□□□□ -1.18
CCDC113-201ENST00000219299 C16orf92Q96LL3 132 aa7.71□□□□□ -1.18
CCDC113-201ENST00000219299 KLF2Q9Y5W3 355 aaPredicted RBP7.71□□□□□ -1.18
CCDC113-201ENST00000219299 A0A1B0GW15 77 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 APOHP02749 345 aaPredicted RBP7.7□□□□□ -1.18
CCDC113-201ENST00000219299 CXCL1P09341 107 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 Q8TCH9 128 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 COPS9Q8WXC6 57 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 NUDT11Q96G61 164 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 MEGF9Q9H1U4 602 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 ZNF257Q9Y2Q1 563 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 ERVK11-1P61568 191 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 OR10J3Q5JRS4 329 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 GFI1BQ5VTD9 330 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 OR4X2Q8NGF9 303 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 RAX2Q96IS3 184 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 COL5A1P20908 1838 aaPredicted RBP7.7□□□□□ -1.18
CCDC113-201ENST00000219299 A0A0G2JLM5 398 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 TSPOP30536 169 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 CFHR2P36980 270 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 TCF23Q7RTU1 214 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 CYTL1Q9NRR1 136 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 S4R3C0 116 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 MSMBP08118 114 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 SAA1P0DJI8 122 aaPredicted RBP7.7□□□□□ -1.18
CCDC113-201ENST00000219299 TFPI2P48307 235 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 LINC00205P59089 165 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 TFF3Q07654 80 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 C10orf126Q8N4M7 172 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 MBD3L1Q8WWY6 194 aa7.7□□□□□ -1.18
CCDC113-201ENST00000219299 TRAV8-6A0A0B4J262 113 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 SNAI2O43623 268 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 ATP5LO75964 103 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 TM4SF20Q53R12 229 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 TMEM219Q86XT9 240 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 WFDC3Q8IUB2 231 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 PRELID3AQ96N28 172 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 COL6A3P12111 3177 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 WDFY4Q6ZS81 3184 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 TSPAN13O95857 204 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 PRSS2P07478 247 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 CD55P08174 381 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 LMO1P25800 156 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 SPRNQ5BIV9 151 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 TNFRSF14Q92956 283 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 ZNRD1Q9P1U0 126 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 NBR2O15453 112 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 GUSBP1Q15486 140 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 PPP1R27Q86WC6 154 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 EAF1Q96JC9 268 aaPredicted RBP7.69□□□□□ -1.18
CCDC113-201ENST00000219299 TMEM160Q9NX00 188 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 LINC00527Q9UJ94 153 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 PRTN3P24158 256 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 SEC11AP67812 179 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 CCL20P78556 96 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 RNF166Q96A37 237 aaPredicted RBP7.69□□□□□ -1.18
CCDC113-201ENST00000219299 GNB1LQ9BYB4 327 aa7.69□□□□□ -1.18
CCDC113-201ENST00000219299 A0A1B0GUT8 65 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 C19orf84I3L1E1 186 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 PEX7O00628 323 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 PF4P02776 101 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 MSMPQ1L6U9 139 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 GOLT1AQ6ZVE7 132 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 LINC01356Q8N9X3 169 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 RPP21Q9H633 154 aaKnown RBP7.68□□□□□ -1.18
CCDC113-201ENST00000219299 NPIPB3Q92617 1050 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 FNDC4Q9H6D8 234 aaPredicted RBP7.68□□□□□ -1.18
CCDC113-201ENST00000219299 ST20Q9HBF5 79 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 OSTCQ9NRP0 149 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 NPIPB6E9PJ23 425 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 H3BUX3 64 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 TRGV3P03979 118 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 RIPPLY3P57055 190 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 CIRBPQ14011 172 aaKnown RBP7.68□□□□□ -1.18
CCDC113-201ENST00000219299 Q6AWC8 147 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 LHFPL1Q86WI0 220 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 SGK494Q96LW2 274 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 WFDC1Q9HC57 220 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 WNT2P09544 360 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 LOXP28300 417 aaPredicted RBP7.68□□□□□ -1.18
CCDC113-201ENST00000219299 CX3CL1P78423 397 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 FAM53AQ6NSI3 398 aaPredicted RBP7.68□□□□□ -1.18
CCDC113-201ENST00000219299 OR2K2Q8NGT1 345 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 ORAOV1Q8WV07 137 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 NPFFR1Q9GZQ6 430 aa7.68□□□□□ -1.18
CCDC113-201ENST00000219299 FGF23Q9GZV9 251 aaPredicted RBP7.68□□□□□ -1.18
CCDC113-201ENST00000219299 TRAV1-1A0A0B4J248 108 aa7.67□□□□□ -1.18
CCDC113-201ENST00000219299 M0R1W7 72 aa7.67□□□□□ -1.18
CCDC113-201ENST00000219299 NPPCP23582 126 aa7.67□□□□□ -1.18
CCDC113-201ENST00000219299 C11orf53Q8IXP5 236 aa7.67□□□□□ -1.18
CCDC113-201ENST00000219299 NUDT10Q8NFP7 164 aa7.67□□□□□ -1.18
CCDC113-201ENST00000219299 MBNL3Q9NUK0 354 aaKnown RBP7.67□□□□□ -1.18
CCDC113-201ENST00000219299 TRBV20OR9-2A0A075B6H5 130 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms