RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 HIST1H1EP10412 219 aaKnown RBP23.28■■□□□ 1.32
PABPN1-201ENST00000216727 TXN2Q99757 166 aa23.28■■□□□ 1.32
PABPN1-201ENST00000216727 V9GYV3 84 aa23.28■■□□□ 1.32
PABPN1-201ENST00000216727 UBR5O95071 2799 aaPredicted RBP23.28■■□□□ 1.32
PABPN1-201ENST00000216727 ISLRO14498 428 aa23.28■■□□□ 1.32
PABPN1-201ENST00000216727 IL4P05112 153 aa23.28■■□□□ 1.32
PABPN1-201ENST00000216727 Q56UQ5 140 aa23.28■■□□□ 1.32
PABPN1-201ENST00000216727 S100A7AQ86SG5 101 aa23.28■■□□□ 1.32
PABPN1-201ENST00000216727 C5orf56Q8N8D9 126 aa23.28■■□□□ 1.32
PABPN1-201ENST00000216727 LINC00479Q96M42 142 aa23.28■■□□□ 1.32
PABPN1-201ENST00000216727 TMUB1Q9BVT8 246 aa23.28■■□□□ 1.32
PABPN1-201ENST00000216727 ATP6V0E1O15342 81 aa23.27■■□□□ 1.32
PABPN1-201ENST00000216727 S100A8P05109 93 aa23.27■■□□□ 1.32
PABPN1-201ENST00000216727 VN1R17PQ8TDU5 208 aa23.27■■□□□ 1.32
PABPN1-201ENST00000216727 TMEM190Q8WZ59 177 aa23.27■■□□□ 1.32
PABPN1-201ENST00000216727 SVEP1Q4LDE5 3571 aa23.27■■□□□ 1.32
PABPN1-201ENST00000216727 IGHV3OR16-10A0A075B7F0 116 aa23.26■■□□□ 1.31
PABPN1-201ENST00000216727 SCGB2A1O75556 95 aa23.26■■□□□ 1.31
PABPN1-201ENST00000216727 SLC25A5P05141 298 aaKnown RBP23.26■■□□□ 1.31
PABPN1-201ENST00000216727 UNQ5815/PRO19632Q6UWF5 114 aa23.26■■□□□ 1.31
PABPN1-201ENST00000216727 C5orf17Q8NAS9 161 aa23.26■■□□□ 1.31
PABPN1-201ENST00000216727 FBXL7Q9UJT9 491 aa23.26■■□□□ 1.31
PABPN1-201ENST00000216727 RNF24Q9Y225 148 aa23.26■■□□□ 1.31
PABPN1-201ENST00000216727 KLF12Q9Y4X4 402 aa23.26■■□□□ 1.31
PABPN1-201ENST00000216727 TMEM183BQ1AE95 376 aa23.26■■□□□ 1.31
PABPN1-201ENST00000216727 ACTL10Q5JWF8 245 aa23.26■■□□□ 1.31
PABPN1-201ENST00000216727 PIFOQ8TCI5 191 aa23.26■■□□□ 1.31
PABPN1-201ENST00000216727 NRGNQ92686 78 aa23.26■■□□□ 1.31
PABPN1-201ENST00000216727 A0A0U1RQK1 487 aa23.25■■□□□ 1.31
PABPN1-201ENST00000216727 ZNF320A2RRD8 509 aa23.25■■□□□ 1.31
PABPN1-201ENST00000216727 SLC17A3O00476 420 aa23.25■■□□□ 1.31
PABPN1-201ENST00000216727 BRD3OSQ6XYD6 125 aa23.25■■□□□ 1.31
PABPN1-201ENST00000216727 BPIFA4PQ86YQ2 179 aa23.25■■□□□ 1.31
PABPN1-201ENST00000216727 Q9H3A6 140 aa23.25■■□□□ 1.31
PABPN1-201ENST00000216727 MOB4Q9Y3A3 225 aa23.25■■□□□ 1.31
PABPN1-201ENST00000216727 CDX1P47902 265 aaPredicted RBP23.25■■□□□ 1.31
PABPN1-201ENST00000216727 ZNF586Q9NXT0 402 aa23.25■■□□□ 1.31
PABPN1-201ENST00000216727 VPS13CQ709C8 3753 aa23.24■■□□□ 1.31
PABPN1-201ENST00000216727 B4DSR2 109 aa23.24■■□□□ 1.31
PABPN1-201ENST00000216727 SLC25A16P16260 332 aa23.24■■□□□ 1.31
PABPN1-201ENST00000216727 GNG5P63218 68 aa23.24■■□□□ 1.31
PABPN1-201ENST00000216727 ECSCRQ19T08 205 aa23.24■■□□□ 1.31
PABPN1-201ENST00000216727 ATG101Q9BSB4 218 aa23.24■■□□□ 1.31
PABPN1-201ENST00000216727 C7orf69Q9H7B7 122 aa23.24■■□□□ 1.31
PABPN1-201ENST00000216727 OTORQ9NRC9 128 aa23.24■■□□□ 1.31
PABPN1-201ENST00000216727 BAGE2Q86Y30 109 aa23.23■■□□□ 1.31
PABPN1-201ENST00000216727 S100A9P06702 114 aaKnown RBP23.23■■□□□ 1.31
PABPN1-201ENST00000216727 IGHV4-38-2P0DP08 117 aa23.23■■□□□ 1.31
PABPN1-201ENST00000216727 USF2Q15853 346 aaPredicted RBP23.23■■□□□ 1.31
PABPN1-201ENST00000216727 RPEL1Q2QD12 228 aa23.23■■□□□ 1.31
PABPN1-201ENST00000216727 SMIM12Q96EX1 92 aa23.23■■□□□ 1.31
PABPN1-201ENST00000216727 RNASE7Q9H1E1 156 aaKnown RBP23.23■■□□□ 1.31
PABPN1-201ENST00000216727 TRBV9A0A0B4J1U6 114 aa23.22■■□□□ 1.31
PABPN1-201ENST00000216727 MGST1P10620 155 aaKnown RBP23.22■■□□□ 1.31
PABPN1-201ENST00000216727 TRAV34A0A0B4J273 112 aa23.21■■□□□ 1.31
PABPN1-201ENST00000216727 CTSGP08311 255 aa23.21■■□□□ 1.31
PABPN1-201ENST00000216727 RPL15P61313 204 aaKnown RBP23.21■■□□□ 1.31
PABPN1-201ENST00000216727 IBA57Q5T440 356 aaKnown RBP23.21■■□□□ 1.31
PABPN1-201ENST00000216727 IGLC2P0DOY2 106 aa23.21■■□□□ 1.31
PABPN1-201ENST00000216727 UBE2G1P62253 170 aa23.21■■□□□ 1.31
PABPN1-201ENST00000216727 OR4F17Q8NGA8 305 aa23.21■■□□□ 1.31
PABPN1-201ENST00000216727 UTP20O75691 2785 aaKnown RBP23.21■■□□□ 1.31
PABPN1-201ENST00000216727 OR2T8A6NH00 312 aa23.2■■□□□ 1.3
PABPN1-201ENST00000216727 ZNF98A6NK75 572 aa23.2■■□□□ 1.3
PABPN1-201ENST00000216727 GATA3P23771 443 aa23.2■■□□□ 1.3
PABPN1-201ENST00000216727 MEOX2P50222 304 aa23.2■■□□□ 1.3
PABPN1-201ENST00000216727 H3BTX0 84 aa23.2■■□□□ 1.3
PABPN1-201ENST00000216727 MRPS12O15235 138 aaKnown RBP23.2■■□□□ 1.3
PABPN1-201ENST00000216727 TCRAP04437 139 aa23.2■■□□□ 1.3
PABPN1-201ENST00000216727 FAM231DQ6ZW35 169 aa23.2■■□□□ 1.3
PABPN1-201ENST00000216727 TMEM219Q86XT9 240 aa23.2■■□□□ 1.3
PABPN1-201ENST00000216727 EPG5Q9HCE0 2579 aa23.19■■□□□ 1.3
PABPN1-201ENST00000216727 LRRK2Q5S007 2527 aa23.19■■□□□ 1.3
PABPN1-201ENST00000216727 TRBV19A0A075B6N1 114 aa23.19■■□□□ 1.3
PABPN1-201ENST00000216727 LINC01548A6NM66 108 aa23.19■■□□□ 1.3
PABPN1-201ENST00000216727 IGHV3-23P01764 117 aa23.19■■□□□ 1.3
PABPN1-201ENST00000216727 C15orf32Q32M92 178 aa23.19■■□□□ 1.3
PABPN1-201ENST00000216727 ZNF502Q8TBZ5 544 aa23.19■■□□□ 1.3
PABPN1-201ENST00000216727 FMC1Q96HJ9 113 aa23.19■■□□□ 1.3
PABPN1-201ENST00000216727 HIF1ANQ9NWT6 349 aa23.19■■□□□ 1.3
PABPN1-201ENST00000216727 PITPNC1Q9UKF7 332 aa23.19■■□□□ 1.3
PABPN1-201ENST00000216727 CSMD1Q96PZ7 3565 aa23.19■■□□□ 1.3
PABPN1-201ENST00000216727 TRAV20A0A0B4J274 112 aa23.18■■□□□ 1.3
PABPN1-201ENST00000216727 AMY1AP04745 511 aa23.18■■□□□ 1.3
PABPN1-201ENST00000216727 FAM208BQ5VWN6 2430 aa23.18■■□□□ 1.3
PABPN1-201ENST00000216727 RHOGP84095 191 aa23.18■■□□□ 1.3
PABPN1-201ENST00000216727 LYPD1Q8N2G4 141 aa23.18■■□□□ 1.3
PABPN1-201ENST00000216727 NHLRC2Q8NBF2 726 aa23.18■■□□□ 1.3
PABPN1-201ENST00000216727 C12orf57Q99622 126 aa23.18■■□□□ 1.3
PABPN1-201ENST00000216727 SH2D7A6NKC9 451 aaPredicted RBP23.17■■□□□ 1.3
PABPN1-201ENST00000216727 G3V318 75 aa23.17■■□□□ 1.3
PABPN1-201ENST00000216727 CRIP2P52943 208 aaPredicted RBP23.17■■□□□ 1.3
PABPN1-201ENST00000216727 GPR82Q96P67 336 aa23.17■■□□□ 1.3
PABPN1-201ENST00000216727 A1L4Q6 167 aa23.16■■□□□ 1.3
PABPN1-201ENST00000216727 ADMP35318 185 aa23.16■■□□□ 1.3
PABPN1-201ENST00000216727 CHRDL1Q9BU40 450 aa23.16■■□□□ 1.3
PABPN1-201ENST00000216727 TRAPPC1Q9Y5R8 145 aa23.16■■□□□ 1.3
PABPN1-201ENST00000216727 CRYBG3Q68DQ2 2970 aa23.16■■□□□ 1.3
PABPN1-201ENST00000216727 IFITM10A6NMD0 228 aa23.16■■□□□ 1.3
PABPN1-201ENST00000216727 SMIM6P0DI80 62 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms