RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 RCC1LQ96I51 464 aaKnown RBP11.19□□□□□ -0.62
SIX4-201ENST00000216513 CACNG8Q8WXS5 425 aa11.19□□□□□ -0.62
SIX4-201ENST00000216513 SLC50A1Q9BRV3 221 aa11.19□□□□□ -0.62
SIX4-201ENST00000216513 PHF3Q92576 2039 aaKnown RBP11.19□□□□□ -0.62
SIX4-201ENST00000216513 ZNF503-AS2A6NEH8 195 aa11.19□□□□□ -0.62
SIX4-201ENST00000216513 AQP10Q96PS8 301 aa11.19□□□□□ -0.62
SIX4-201ENST00000216513 A0A0U1RRA0 63 aa11.19□□□□□ -0.62
SIX4-201ENST00000216513 CD8AP01732 235 aa11.19□□□□□ -0.62
SIX4-201ENST00000216513 PLSCR2Q9NRY7 297 aa11.19□□□□□ -0.62
SIX4-201ENST00000216513 TOMM7Q9P0U1 55 aa11.19□□□□□ -0.62
SIX4-201ENST00000216513 Q6ZR03 302 aa11.18□□□□□ -0.62
SIX4-201ENST00000216513 C1QTNF4Q9BXJ3 329 aa11.18□□□□□ -0.62
SIX4-201ENST00000216513 INAFM1C9JVW0 142 aa11.18□□□□□ -0.62
SIX4-201ENST00000216513 NDUFA3O95167 84 aa11.18□□□□□ -0.62
SIX4-201ENST00000216513 RHPN1-AS1Q9BWJ2 59 aa11.18□□□□□ -0.62
SIX4-201ENST00000216513 Q9H3A6 140 aa11.18□□□□□ -0.62
SIX4-201ENST00000216513 JKAMPQ9P055 326 aa11.18□□□□□ -0.62
SIX4-201ENST00000216513 CADP27708 2225 aa11.18□□□□□ -0.62
SIX4-201ENST00000216513 CACNA1DQ01668 2161 aa11.18□□□□□ -0.62
SIX4-201ENST00000216513 TDGF1P3P51864 188 aa11.18□□□□□ -0.62
SIX4-201ENST00000216513 DEFB131AP59861 70 aa11.18□□□□□ -0.62
SIX4-201ENST00000216513 SPSB3Q6PJ21 355 aa11.18□□□□□ -0.62
SIX4-201ENST00000216513 COQ2Q96H96 371 aa11.18□□□□□ -0.62
SIX4-201ENST00000216513 VPREB3Q9UKI3 123 aa11.18□□□□□ -0.62
SIX4-201ENST00000216513 TRAV3A0A0B4J244 114 aa11.18□□□□□ -0.62
SIX4-201ENST00000216513 DANCRP0C864 163 aa11.18□□□□□ -0.62
SIX4-201ENST00000216513 BTCP35070 178 aa11.18□□□□□ -0.62
SIX4-201ENST00000216513 C19orf84I3L1E1 186 aa11.18□□□□□ -0.62
SIX4-201ENST00000216513 CHCHD5Q9BSY4 110 aa11.18□□□□□ -0.62
SIX4-201ENST00000216513 PRCDQ00LT1 54 aa11.17□□□□□ -0.62
SIX4-201ENST00000216513 NHLRC3Q5JS37 347 aa11.17□□□□□ -0.62
SIX4-201ENST00000216513 SIGLEC9Q9Y336 463 aa11.17□□□□□ -0.62
SIX4-201ENST00000216513 TSSC4Q9Y5U2 329 aaPredicted RBP11.17□□□□□ -0.62
SIX4-201ENST00000216513 ZFP36P26651 326 aaKnown RBP11.17□□□□□ -0.62
SIX4-201ENST00000216513 RNF5Q99942 180 aa11.17□□□□□ -0.62
SIX4-201ENST00000216513 CCL20P78556 96 aa11.17□□□□□ -0.62
SIX4-201ENST00000216513 C1QL4Q86Z23 238 aa11.17□□□□□ -0.62
SIX4-201ENST00000216513 WFDC1Q9HC57 220 aa11.17□□□□□ -0.62
SIX4-201ENST00000216513 WNK2Q9Y3S1 2297 aa11.17□□□□□ -0.62
SIX4-201ENST00000216513 SMIM6P0DI80 62 aa11.17□□□□□ -0.62
SIX4-201ENST00000216513 IGHV4-38-2P0DP08 117 aa11.17□□□□□ -0.62
SIX4-201ENST00000216513 GPX4P36969 197 aaPredicted RBP11.17□□□□□ -0.62
SIX4-201ENST00000216513 NPC2P61916 151 aa11.17□□□□□ -0.62
SIX4-201ENST00000216513 CD5P06127 495 aa11.17□□□□□ -0.62
SIX4-201ENST00000216513 FREM3P0C091 2139 aa11.16□□□□□ -0.62
SIX4-201ENST00000216513 SPATA31B1PQ5VZV4 182 aa11.16□□□□□ -0.62
SIX4-201ENST00000216513 TMEM42Q69YG0 159 aa11.16□□□□□ -0.62
SIX4-201ENST00000216513 PRADC1Q9BSG0 188 aa11.16□□□□□ -0.62
SIX4-201ENST00000216513 A0A087WX48 190 aa11.16□□□□□ -0.62
SIX4-201ENST00000216513 GAGE10A6NGK3 116 aa11.16□□□□□ -0.62
SIX4-201ENST00000216513 F5H768 121 aa11.16□□□□□ -0.62
SIX4-201ENST00000216513 UCP1P25874 307 aa11.16□□□□□ -0.62
SIX4-201ENST00000216513 CNTFRP26992 372 aa11.16□□□□□ -0.62
SIX4-201ENST00000216513 STAG3L2P0CL84 134 aa11.16□□□□□ -0.62
SIX4-201ENST00000216513 APOC4P55056 127 aa11.16□□□□□ -0.62
SIX4-201ENST00000216513 DAZAP2Q15038 168 aaPredicted RBP11.16□□□□□ -0.62
SIX4-201ENST00000216513 TMEM170BQ5T4T1 132 aa11.16□□□□□ -0.62
SIX4-201ENST00000216513 C10orf105Q8TEF2 133 aa11.16□□□□□ -0.62
SIX4-201ENST00000216513 YLPM1P49750 1951 aaKnown RBP11.16□□□□□ -0.62
SIX4-201ENST00000216513 LMO1P25800 156 aa11.16□□□□□ -0.62
SIX4-201ENST00000216513 HELZP42694 1942 aaKnown RBP11.16□□□□□ -0.62
SIX4-201ENST00000216513 CFAP161Q6P656 301 aa11.16□□□□□ -0.62
SIX4-201ENST00000216513 HIST1H2BAQ96A08 127 aa11.16□□□□□ -0.62
SIX4-201ENST00000216513 RCHY1Q96PM5 261 aa11.16□□□□□ -0.62
SIX4-201ENST00000216513 TRGV11A0A075B6L2 103 aa11.15□□□□□ -0.62
SIX4-201ENST00000216513 Q8TCH9 128 aa11.15□□□□□ -0.62
SIX4-201ENST00000216513 COX6CP09669 75 aa11.15□□□□□ -0.62
SIX4-201ENST00000216513 XCL2Q9UBD3 114 aa11.15□□□□□ -0.62
SIX4-201ENST00000216513 A0A1B0GV90 55 aa11.15□□□□□ -0.62
SIX4-201ENST00000216513 IGLV1-44P01699 117 aa11.15□□□□□ -0.62
SIX4-201ENST00000216513 MRAP2Q96G30 205 aa11.15□□□□□ -0.62
SIX4-201ENST00000216513 PTPRDP23468 1912 aa11.15□□□□□ -0.62
SIX4-201ENST00000216513 TRAV12-3A0A0B4J271 114 aa11.15□□□□□ -0.63
SIX4-201ENST00000216513 ARTNQ5T4W7 220 aa11.15□□□□□ -0.63
SIX4-201ENST00000216513 TXNDC17Q9BRA2 123 aa11.15□□□□□ -0.63
SIX4-201ENST00000216513 Q6P435 159 aa11.14□□□□□ -0.63
SIX4-201ENST00000216513 WFDC11Q8NEX6 87 aa11.14□□□□□ -0.63
SIX4-201ENST00000216513 DAZ1Q9NQZ3 744 aaKnown RBP11.14□□□□□ -0.63
SIX4-201ENST00000216513 IGLV3-9A0A075B6K5 115 aa11.14□□□□□ -0.63
SIX4-201ENST00000216513 RNF222A6NCQ9 220 aa11.14□□□□□ -0.63
SIX4-201ENST00000216513 ZNF98A6NK75 572 aa11.14□□□□□ -0.63
SIX4-201ENST00000216513 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.14□□□□□ -0.63
SIX4-201ENST00000216513 LOXP28300 417 aaPredicted RBP11.14□□□□□ -0.63
SIX4-201ENST00000216513 DAD1P61803 113 aa11.14□□□□□ -0.63
SIX4-201ENST00000216513 CFHR3Q02985 330 aa11.14□□□□□ -0.63
SIX4-201ENST00000216513 VENTXO95231 258 aa11.14□□□□□ -0.63
SIX4-201ENST00000216513 COTL1Q14019 142 aa11.14□□□□□ -0.63
SIX4-201ENST00000216513 OR10J3Q5JRS4 329 aa11.14□□□□□ -0.63
SIX4-201ENST00000216513 TMEM183AQ8IXX5 376 aa11.14□□□□□ -0.63
SIX4-201ENST00000216513 SLC25A39Q9BZJ4 359 aaPredicted RBP11.14□□□□□ -0.63
SIX4-201ENST00000216513 INSP01308 110 aa11.14□□□□□ -0.63
SIX4-201ENST00000216513 HLA-DQA1P01909 254 aa11.14□□□□□ -0.63
SIX4-201ENST00000216513 MST1LQ2TV78 715 aa11.14□□□□□ -0.63
SIX4-201ENST00000216513 COL5A1-AS1Q5SY13 56 aa11.14□□□□□ -0.63
SIX4-201ENST00000216513 EP400Q96L91 3159 aa11.14□□□□□ -0.63
SIX4-201ENST00000216513 PLP1P60201 277 aa11.13□□□□□ -0.63
SIX4-201ENST00000216513 MLANAQ16655 118 aa11.13□□□□□ -0.63
SIX4-201ENST00000216513 TMEM95Q3KNT9 176 aa11.13□□□□□ -0.63
SIX4-201ENST00000216513 TMEM238LA0A1B0GVL6 79 aa11.13□□□□□ -0.63
SIX4-201ENST00000216513 A6NJY4 79 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms