RNA–Protein interactions for RNA: ENST00000194530.7

STRADB-201, Transcript of STE20-related kinase adaptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STRADB, Length 2,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-201ENST00000194530 SOX21Q9Y651 276 aaPredicted RBP16.52■□□□□ 0.23
STRADB-201ENST00000194530 PCNX1Q96RV3 2341 aa16.51■□□□□ 0.23
STRADB-201ENST00000194530 C19orf71A6NCJ1 209 aa16.51■□□□□ 0.23
STRADB-201ENST00000194530 VWC2LB2RUY7 222 aa16.51■□□□□ 0.23
STRADB-201ENST00000194530 K7ENP7 123 aa16.51■□□□□ 0.23
STRADB-201ENST00000194530 DAZAP1Q96EP5 407 aaKnown RBP16.51■□□□□ 0.23
STRADB-201ENST00000194530 SLC25A39Q9BZJ4 359 aaPredicted RBP16.51■□□□□ 0.23
STRADB-201ENST00000194530 HBBP68871 147 aa16.5■□□□□ 0.23
STRADB-201ENST00000194530 LINC00322Q6ZN03 302 aaPredicted RBP16.5■□□□□ 0.23
STRADB-201ENST00000194530 TCF24Q7RTU0 167 aa16.5■□□□□ 0.23
STRADB-201ENST00000194530 RASL11BQ9BPW5 248 aa16.5■□□□□ 0.23
STRADB-201ENST00000194530 WNT10AQ9GZT5 417 aa16.5■□□□□ 0.23
STRADB-201ENST00000194530 H3BTX0 84 aa16.5■□□□□ 0.23
STRADB-201ENST00000194530 HSBP1O75506 76 aa16.5■□□□□ 0.23
STRADB-201ENST00000194530 CTRLP40313 264 aa16.5■□□□□ 0.23
STRADB-201ENST00000194530 OR8B3Q8NGG8 313 aa16.5■□□□□ 0.23
STRADB-201ENST00000194530 OR8B2Q96RD0 313 aa16.5■□□□□ 0.23
STRADB-201ENST00000194530 SSBP4Q9BWG4 385 aaPredicted RBP16.5■□□□□ 0.23
STRADB-201ENST00000194530 MAP1BP46821 2468 aaKnown RBP16.5■□□□□ 0.23
STRADB-201ENST00000194530 GPR6P46095 362 aaPredicted RBP16.49■□□□□ 0.23
STRADB-201ENST00000194530 GFRA4Q9GZZ7 299 aa16.49■□□□□ 0.23
STRADB-201ENST00000194530 ACACAQ13085 2346 aa16.49■□□□□ 0.23
STRADB-201ENST00000194530 CNIH1O95406 144 aa16.49■□□□□ 0.23
STRADB-201ENST00000194530 SPATA45Q537H7 98 aa16.49■□□□□ 0.23
STRADB-201ENST00000194530 TMEM190Q8WZ59 177 aa16.49■□□□□ 0.23
STRADB-201ENST00000194530 LIPFP07098 398 aa16.48■□□□□ 0.23
STRADB-201ENST00000194530 ZNF672Q499Z4 452 aaPredicted RBP16.48■□□□□ 0.23
STRADB-201ENST00000194530 FAM162BQ5T6X4 162 aa16.48■□□□□ 0.23
STRADB-201ENST00000194530 SMG1Q96Q15 3661 aaKnown RBP16.48■□□□□ 0.23
STRADB-201ENST00000194530 ONECUT1Q9UBC0 465 aa16.48■□□□□ 0.23
STRADB-201ENST00000194530 LY6G5BQ8NDX9 201 aa16.48■□□□□ 0.23
STRADB-201ENST00000194530 OR2D3Q8NGH3 330 aa16.48■□□□□ 0.23
STRADB-201ENST00000194530 MALRD1Q5VYJ5 2156 aa16.48■□□□□ 0.23
STRADB-201ENST00000194530 RIF1Q5UIP0 2472 aaKnown RBP16.47■□□□□ 0.23
STRADB-201ENST00000194530 FAM231BA6NCW3 169 aa16.47■□□□□ 0.23
STRADB-201ENST00000194530 RPLP1P05386 114 aaKnown RBP16.47■□□□□ 0.23
STRADB-201ENST00000194530 FOXC1Q12948 553 aa16.47■□□□□ 0.23
STRADB-201ENST00000194530 ANKRD11Q6UB99 2663 aaPredicted RBP16.47■□□□□ 0.23
STRADB-201ENST00000194530 TIMM23O14925 209 aa16.47■□□□□ 0.23
STRADB-201ENST00000194530 FBXL19-AS1Q494R0 122 aa16.47■□□□□ 0.23
STRADB-201ENST00000194530 RBPMS2Q6ZRY4 209 aaKnown RBP16.47■□□□□ 0.23
STRADB-201ENST00000194530 GTSF1Q8WW33 167 aa16.47■□□□□ 0.23
STRADB-201ENST00000194530 RNF24Q9Y225 148 aa16.47■□□□□ 0.23
STRADB-201ENST00000194530 BSNQ9UPA5 3926 aa16.46■□□□□ 0.23
STRADB-201ENST00000194530 M0R2Z0 102 aa16.46■□□□□ 0.23
STRADB-201ENST00000194530 IGKV1-17P01599 117 aa16.46■□□□□ 0.23
STRADB-201ENST00000194530 Q86TA4 180 aa16.46■□□□□ 0.23
STRADB-201ENST00000194530 PGLYRP4Q96LB8 373 aa16.46■□□□□ 0.23
STRADB-201ENST00000194530 FAM90A27PA6NNH2 459 aa16.45■□□□□ 0.22
STRADB-201ENST00000194530 HTR1DP28221 377 aa16.45■□□□□ 0.22
STRADB-201ENST00000194530 PMCHL1Q16048 86 aa16.45■□□□□ 0.22
STRADB-201ENST00000194530 RNASEKQ6P5S7 137 aaKnown RBP16.45■□□□□ 0.22
STRADB-201ENST00000194530 SCNM1Q9BWG6 230 aa16.45■□□□□ 0.22
STRADB-201ENST00000194530 TRBV6-1A0A0K0K1D8 114 aa16.45■□□□□ 0.22
STRADB-201ENST00000194530 NPIPB6E9PJ23 425 aa16.45■□□□□ 0.22
STRADB-201ENST00000194530 DPM3Q9P2X0 92 aa16.45■□□□□ 0.22
STRADB-201ENST00000194530 UQCR10Q9UDW1 63 aa16.45■□□□□ 0.22
STRADB-201ENST00000194530 ZFHX2Q9C0A1 2572 aaPredicted RBP16.45■□□□□ 0.22
STRADB-201ENST00000194530 FAM181BA6NEQ2 426 aa16.44■□□□□ 0.22
STRADB-201ENST00000194530 K7EIM0 57 aa16.44■□□□□ 0.22
STRADB-201ENST00000194530 SIAH2O43255 324 aa16.44■□□□□ 0.22
STRADB-201ENST00000194530 KLHDC1Q8N7A1 406 aa16.44■□□□□ 0.22
STRADB-201ENST00000194530 SHANK2-AS3Q9BTD1 123 aa16.44■□□□□ 0.22
STRADB-201ENST00000194530 HOXB4P17483 251 aaPredicted RBP16.44■□□□□ 0.22
STRADB-201ENST00000194530 COL8A1P27658 744 aa16.44■□□□□ 0.22
STRADB-201ENST00000194530 GOLT1AQ6ZVE7 132 aa16.44■□□□□ 0.22
STRADB-201ENST00000194530 BPIFA4PQ86YQ2 179 aa16.44■□□□□ 0.22
STRADB-201ENST00000194530 EXOC3-AS1Q8N2X6 119 aa16.44■□□□□ 0.22
STRADB-201ENST00000194530 A6NNC1 897 aa16.43■□□□□ 0.22
STRADB-201ENST00000194530 NBR2O15453 112 aa16.43■□□□□ 0.22
STRADB-201ENST00000194530 IGLV2-11P01706 119 aa16.43■□□□□ 0.22
STRADB-201ENST00000194530 LDLRAD2Q5SZI1 272 aa16.43■□□□□ 0.22
STRADB-201ENST00000194530 PRNTQ86SH4 94 aa16.43■□□□□ 0.22
STRADB-201ENST00000194530 OR11H6Q8NGC7 330 aa16.43■□□□□ 0.22
STRADB-201ENST00000194530 TRAV8-1A0A0A6YYK1 113 aa16.43■□□□□ 0.22
STRADB-201ENST00000194530 IGLC2P0DOY2 106 aa16.43■□□□□ 0.22
STRADB-201ENST00000194530 IGLC3P0DOY3 106 aa16.43■□□□□ 0.22
STRADB-201ENST00000194530 CEACAM3P40198 252 aa16.43■□□□□ 0.22
STRADB-201ENST00000194530 OR4F17Q8NGA8 305 aa16.43■□□□□ 0.22
STRADB-201ENST00000194530 TRBV19A0A075B6N1 114 aa16.42■□□□□ 0.22
STRADB-201ENST00000194530 BTF3P20290 206 aaKnown RBP16.42■□□□□ 0.22
STRADB-201ENST00000194530 CIARTQ8N365 385 aaPredicted RBP16.42■□□□□ 0.22
STRADB-201ENST00000194530 RAB1BQ9H0U4 201 aa16.42■□□□□ 0.22
STRADB-201ENST00000194530 POLEQ07864 2286 aa16.42■□□□□ 0.22
STRADB-201ENST00000194530 H3BRN7 92 aa16.42■□□□□ 0.22
STRADB-201ENST00000194530 GRNP28799 593 aaKnown RBP16.42■□□□□ 0.22
STRADB-201ENST00000194530 ARF6P62330 175 aa16.42■□□□□ 0.22
STRADB-201ENST00000194530 EBLN2Q6P2I7 272 aa16.42■□□□□ 0.22
STRADB-201ENST00000194530 LYPD1Q8N2G4 141 aa16.42■□□□□ 0.22
STRADB-201ENST00000194530 NPBQ8NG41 125 aa16.42■□□□□ 0.22
STRADB-201ENST00000194530 ATMQ13315 3056 aa16.42■□□□□ 0.22
STRADB-201ENST00000194530 TIMD4Q96H15 378 aa16.41■□□□□ 0.22
STRADB-201ENST00000194530 APC2O95996 2303 aa16.41■□□□□ 0.22
STRADB-201ENST00000194530 ZNF25P17030 456 aaPredicted RBP16.4■□□□□ 0.22
STRADB-201ENST00000194530 G0S2P27469 103 aa16.4■□□□□ 0.22
STRADB-201ENST00000194530 C16orf54Q6UWD8 224 aa16.4■□□□□ 0.22
STRADB-201ENST00000194530 CFHR4Q92496 578 aa16.4■□□□□ 0.22
STRADB-201ENST00000194530 HILPDAQ9Y5L2 63 aa16.4■□□□□ 0.22
STRADB-201ENST00000194530 ADGRG4Q8IZF6 3080 aa16.4■□□□□ 0.22
STRADB-201ENST00000194530 CHEK1O14757 476 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms