RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 TTC9CQ8N5M4 171 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 ZNF48Q96MX3 618 aaPredicted RBP6.53□□□□□ -1.36
VAMP3-201ENST00000054666 TBX15Q96SF7 602 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 CCL19Q99731 98 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 PIMREGQ9BSJ6 248 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 SHANK2-AS3Q9BTD1 123 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 GNB1LQ9BYB4 327 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 MRPL27Q9P0M9 148 aaKnown RBP6.53□□□□□ -1.36
VAMP3-201ENST00000054666 H3BRN7 92 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 OVOL3O00110 214 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 HLA-DRB1P01911 266 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 TCRAP04437 139 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 AMY1AP04745 511 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 RAB4BP61018 213 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 LMO4P61968 165 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 USF2Q15853 346 aaPredicted RBP6.52□□□□□ -1.37
VAMP3-201ENST00000054666 FBLN7Q53RD9 439 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 KLF17Q5JT82 389 aaPredicted RBP6.52□□□□□ -1.37
VAMP3-201ENST00000054666 GPR82Q96P67 336 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 C21orf62Q9NYP8 219 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 NAT8BQ9UHF3 227 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 PIEZO1Q92508 2521 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 SMIM27A0A1W2PRY6 76 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 H3BTX0 84 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 SPINK4O60575 86 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 HLA-DQA1P01909 254 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 CRISP2P16562 243 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 ASPHD1Q5U4P2 390 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 GBGT1Q8N5D6 347 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 GRAMD2BQ96HH9 432 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 FANCD2OSQ96PS1 177 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 ZNF331Q9NQX6 463 aaPredicted RBP6.52□□□□□ -1.37
VAMP3-201ENST00000054666 KLF12Q9Y4X4 402 aa6.52□□□□□ -1.37
VAMP3-201ENST00000054666 ABCA1O95477 2261 aa6.51□□□□□ -1.37
VAMP3-201ENST00000054666 IGHV7-81A0A0B4J1V7 117 aa6.51□□□□□ -1.37
VAMP3-201ENST00000054666 IZUMO1RA6ND01 250 aa6.51□□□□□ -1.37
VAMP3-201ENST00000054666 K7EQM0 130 aa6.51□□□□□ -1.37
VAMP3-201ENST00000054666 NPFFO15130 113 aa6.51□□□□□ -1.37
VAMP3-201ENST00000054666 OR2J3O76001 311 aa6.51□□□□□ -1.37
VAMP3-201ENST00000054666 IGHV4-39P01824 125 aa6.51□□□□□ -1.37
VAMP3-201ENST00000054666 S100A7P31151 101 aa6.51□□□□□ -1.37
VAMP3-201ENST00000054666 MRPL54Q6P161 138 aaKnown RBP6.51□□□□□ -1.37
VAMP3-201ENST00000054666 ZNF491Q8N8L2 437 aa6.51□□□□□ -1.37
VAMP3-201ENST00000054666 Q8N9W7 124 aa6.51□□□□□ -1.37
VAMP3-201ENST00000054666 OR5R1Q8NH85 324 aa6.51□□□□□ -1.37
VAMP3-201ENST00000054666 ZNF586Q9NXT0 402 aa6.51□□□□□ -1.37
VAMP3-201ENST00000054666 S4R3C0 116 aa6.51□□□□□ -1.37
VAMP3-201ENST00000054666 HRNRQ86YZ3 2850 aaPredicted RBP6.51□□□□□ -1.37
VAMP3-201ENST00000054666 GRIFINA4D1Z8 144 aa6.5□□□□□ -1.37
VAMP3-201ENST00000054666 CA1P00915 261 aaPredicted RBP6.5□□□□□ -1.37
VAMP3-201ENST00000054666 LTAP01374 205 aa6.5□□□□□ -1.37
VAMP3-201ENST00000054666 SLC35B1P78383 322 aa6.5□□□□□ -1.37
VAMP3-201ENST00000054666 RASL11AQ6T310 242 aa6.5□□□□□ -1.37
VAMP3-201ENST00000054666 NUDT10Q8NFP7 164 aa6.5□□□□□ -1.37
VAMP3-201ENST00000054666 FAM168AQ92567 244 aa6.5□□□□□ -1.37
VAMP3-201ENST00000054666 DAZAP1Q96EP5 407 aaKnown RBP6.5□□□□□ -1.37
VAMP3-201ENST00000054666 NUDT11Q96G61 164 aa6.5□□□□□ -1.37
VAMP3-201ENST00000054666 TRBV19A0A075B6N1 114 aa6.5□□□□□ -1.37
VAMP3-201ENST00000054666 WI2-2373I1.2A0A1W2PRP0 233 aa6.5□□□□□ -1.37
VAMP3-201ENST00000054666 P01737 135 aa6.5□□□□□ -1.37
VAMP3-201ENST00000054666 FCGR2BP31994 310 aaPredicted RBP6.5□□□□□ -1.37
VAMP3-201ENST00000054666 JOSD1Q15040 202 aaPredicted RBP6.5□□□□□ -1.37
VAMP3-201ENST00000054666 ECSCRQ19T08 205 aa6.5□□□□□ -1.37
VAMP3-201ENST00000054666 CLEC2AQ6UVW9 174 aa6.5□□□□□ -1.37
VAMP3-201ENST00000054666 UNQ5815/PRO19632Q6UWF5 114 aa6.5□□□□□ -1.37
VAMP3-201ENST00000054666 Q86TA4 180 aa6.5□□□□□ -1.37
VAMP3-201ENST00000054666 BAGE3Q86Y29 109 aa6.5□□□□□ -1.37
VAMP3-201ENST00000054666 LYPD1Q8N2G4 141 aa6.5□□□□□ -1.37
VAMP3-201ENST00000054666 FAM110DQ8TAY7 271 aaPredicted RBP6.5□□□□□ -1.37
VAMP3-201ENST00000054666 TSKUQ8WUA8 353 aa6.5□□□□□ -1.37
VAMP3-201ENST00000054666 SGK494Q96LW2 274 aa6.5□□□□□ -1.37
VAMP3-201ENST00000054666 TMUB1Q9BVT8 246 aa6.5□□□□□ -1.37
VAMP3-201ENST00000054666 LRBAP50851 2863 aa6.5□□□□□ -1.37
VAMP3-201ENST00000054666 NDUFS8O00217 210 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 TPPP2P59282 170 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 PDE6HQ13956 83 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 CT83Q5H943 113 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 FAM120AOSQ5T036 256 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 TMEM136Q6ZRR5 245 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 GOLT1AQ6ZVE7 132 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 EXOC3-AS1Q8N2X6 119 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 TXN2Q99757 166 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 RPP21Q9H633 154 aaKnown RBP6.49□□□□□ -1.37
VAMP3-201ENST00000054666 C7orf69Q9H7B7 122 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 AAMDCQ9H7C9 122 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 ZNF492Q9P255 531 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 FBXL7Q9UJT9 491 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 POLR3KQ9Y2Y1 108 aaPredicted RBP6.49□□□□□ -1.37
VAMP3-201ENST00000054666 PKD1L2Q7Z442 2459 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 OR2T8A6NH00 312 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 LINC00587B1AMM8 73 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 TSTD3H0UI37 97 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 NDUFB8O95169 186 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 IGLC2P0DOY2 106 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 IQCJQ1A5X6 159 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 CDPF1Q6NVV7 123 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 ATP5L2Q7Z4Y8 100 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 TMEM256Q8N2U0 113 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 VN1R17PQ8TDU5 208 aa6.49□□□□□ -1.37
VAMP3-201ENST00000054666 MBD6Q96DN6 1003 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms