RNA–Protein interactions for RNA: ENST00000642072.1

LINC00339-212, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-212ENST00000642072 OR52E5Q8NH55 327 aa6.02□□□□□ -1.45
LINC00339-212ENST00000642072 RNASEH2CQ8TDP1 164 aaKnown RBP6.02□□□□□ -1.45
LINC00339-212ENST00000642072 PDCD10Q9BUL8 212 aa6.02□□□□□ -1.45
LINC00339-212ENST00000642072 F6UB75 175 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 GSTZ1O43708 216 aaPredicted RBP6.01□□□□□ -1.45
LINC00339-212ENST00000642072 ATG12O94817 140 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 HBE1P02100 147 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 RD3LP0DJH9 198 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 PSG1P11464 419 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 ELK1P19419 428 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 PSMB3P49720 205 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 KRTAP10-2P60368 255 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 SP6Q3SY56 376 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 FAM78BQ5VT40 261 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 AMTNQ6UX39 209 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 GSG1LQ6UXU4 331 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 SLC24A4Q8NFF2 622 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 OR51G1Q8NGK1 321 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 LHFPL5Q8TAF8 219 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 NPIPB3Q92617 1050 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 GPR146Q96CH1 333 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 C17orf77Q96MU5 243 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 KRTAP1-5Q9BYS1 174 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 ENY2Q9NPA8 101 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 KLK11Q9UBX7 282 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 GOLT1BQ9Y3E0 138 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 TMED3Q9Y3Q3 217 aa6.01□□□□□ -1.45
LINC00339-212ENST00000642072 A0A087WXM4 84 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 A0A0J9YX75 114 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 PLAC8L1A1L4L8 177 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 CDS2O95674 445 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 APOA1P02647 267 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 PGAM2P15259 253 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 RORCP51449 518 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 DAD1P61803 113 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 PSG9Q00887 426 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 NEDD8Q15843 81 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 RRN3P1Q2M238 152 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 TRIM16LQ309B1 348 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 SPATA31B1PQ5VZV4 182 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 OR8G2PQ6IF36 304 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 SPATA12Q7Z6I5 190 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 SNX29P2Q8IUI4 249 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 FAM219AQ8IW50 185 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 ARRDC1Q8N5I2 433 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 OR4B1Q8NGF8 309 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 RNF125Q96EQ8 232 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 LINC00052Q96N35 136 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 TMEM222Q9H0R3 208 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 LINC00588Q9Y4M8 146 aa6□□□□□ -1.45
LINC00339-212ENST00000642072 IGKV1D-37A0A075B6S9 117 aa5.99□□□□□ -1.45
LINC00339-212ENST00000642072 LYRM9A8MSI8 78 aa5.99□□□□□ -1.45
LINC00339-212ENST00000642072 ISLRO14498 428 aa5.99□□□□□ -1.45
LINC00339-212ENST00000642072 CRXO43186 299 aaPredicted RBP5.99□□□□□ -1.45
LINC00339-212ENST00000642072 CD3DP04234 171 aa5.99□□□□□ -1.45
LINC00339-212ENST00000642072 PRM2P04554 102 aa5.99□□□□□ -1.45
LINC00339-212ENST00000642072 NUP62P37198 522 aaPredicted RBP5.99□□□□□ -1.45
LINC00339-212ENST00000642072 NMSQ5H8A3 153 aa5.99□□□□□ -1.45
LINC00339-212ENST00000642072 C1orf194Q5T5A4 169 aa5.99□□□□□ -1.45
LINC00339-212ENST00000642072 OR4D10Q8NGI6 311 aa5.99□□□□□ -1.45
LINC00339-212ENST00000642072 OR13C8Q8NGS7 320 aa5.99□□□□□ -1.45
LINC00339-212ENST00000642072 GLYATL2Q8WU03 294 aa5.99□□□□□ -1.45
LINC00339-212ENST00000642072 RRNAD1Q96FB5 475 aaKnown RBP5.99□□□□□ -1.45
LINC00339-212ENST00000642072 ACY3Q96HD9 319 aa5.99□□□□□ -1.45
LINC00339-212ENST00000642072 C20orf173Q96LM9 149 aa5.99□□□□□ -1.45
LINC00339-212ENST00000642072 IGF2BP2-AS1Q96M15 143 aa5.99□□□□□ -1.45
LINC00339-212ENST00000642072 ATG101Q9BSB4 218 aa5.99□□□□□ -1.45
LINC00339-212ENST00000642072 HEYLQ9NQ87 328 aaPredicted RBP5.99□□□□□ -1.45
LINC00339-212ENST00000642072 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.99□□□□□ -1.45
LINC00339-212ENST00000642072 CACNG5Q9UF02 275 aa5.99□□□□□ -1.45
LINC00339-212ENST00000642072 RSL24D1Q9UHA3 163 aaKnown RBP5.99□□□□□ -1.45
LINC00339-212ENST00000642072 UBR4Q5T4S7 5183 aa5.99□□□□□ -1.45
LINC00339-212ENST00000642072 FLG2Q5D862 2391 aaPredicted RBP5.99□□□□□ -1.45
LINC00339-212ENST00000642072 B3GALNT1O75752 331 aa5.98□□□□□ -1.45
LINC00339-212ENST00000642072 OR5AC1P0C628 307 aa5.98□□□□□ -1.45
LINC00339-212ENST00000642072 TSPOP30536 169 aa5.98□□□□□ -1.45
LINC00339-212ENST00000642072 ID1P41134 155 aa5.98□□□□□ -1.45
LINC00339-212ENST00000642072 SUPT4H1P63272 117 aaKnown RBP5.98□□□□□ -1.45
LINC00339-212ENST00000642072 ZNF90Q03938 601 aa5.98□□□□□ -1.45
LINC00339-212ENST00000642072 RNASE10Q5GAN6 216 aaKnown RBP5.98□□□□□ -1.45
LINC00339-212ENST00000642072 ETFRF1Q6IPR1 90 aa5.98□□□□□ -1.45
LINC00339-212ENST00000642072 TERB2Q8NHR7 220 aa5.98□□□□□ -1.45
LINC00339-212ENST00000642072 COQ8AQ8NI60 647 aa5.98□□□□□ -1.45
LINC00339-212ENST00000642072 YIPF6Q96EC8 236 aa5.98□□□□□ -1.45
LINC00339-212ENST00000642072 ABHD1Q96SE0 405 aa5.98□□□□□ -1.45
LINC00339-212ENST00000642072 C7orf50Q9BRJ6 194 aaKnown RBP5.98□□□□□ -1.45
LINC00339-212ENST00000642072 COPZ2Q9P299 210 aa5.98□□□□□ -1.45
LINC00339-212ENST00000642072 HMCN2Q8NDA2 5059 aa5.98□□□□□ -1.45
LINC00339-212ENST00000642072 ZNF705GA8MUZ8 300 aaPredicted RBP5.97□□□□□ -1.45
LINC00339-212ENST00000642072 TBPP20226 339 aa5.97□□□□□ -1.45
LINC00339-212ENST00000642072 BTF3P20290 206 aaKnown RBP5.97□□□□□ -1.45
LINC00339-212ENST00000642072 LSM3P62310 102 aaKnown RBP5.97□□□□□ -1.45
LINC00339-212ENST00000642072 MEF2DQ14814 521 aa5.97□□□□□ -1.45
LINC00339-212ENST00000642072 EBLN2Q6P2I7 272 aa5.97□□□□□ -1.45
LINC00339-212ENST00000642072 GPR141Q7Z602 305 aa5.97□□□□□ -1.45
LINC00339-212ENST00000642072 SELENOHQ8IZQ5 122 aaKnown RBP5.97□□□□□ -1.45
LINC00339-212ENST00000642072 CCDC71LQ8N9Z2 235 aa5.97□□□□□ -1.45
LINC00339-212ENST00000642072 OR52I2Q8NH67 350 aa5.97□□□□□ -1.45
LINC00339-212ENST00000642072 RNF141Q8WVD5 230 aa5.97□□□□□ -1.45
LINC00339-212ENST00000642072 RBPMSQ93062 196 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms