RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 UBAC2Q8NBM4 344 aa7.57□□□□□ -1.2
PHGDH-222ENST00000641587 FANCD2OSQ96PS1 177 aa7.57□□□□□ -1.2
PHGDH-222ENST00000641587 ZNF471Q9BX82 626 aaPredicted RBP7.57□□□□□ -1.2
PHGDH-222ENST00000641587 SLA2Q9H6Q3 261 aa7.57□□□□□ -1.2
PHGDH-222ENST00000641587 BOLA1Q9Y3E2 137 aa7.57□□□□□ -1.2
PHGDH-222ENST00000641587 DMRT1Q9Y5R6 373 aa7.57□□□□□ -1.2
PHGDH-222ENST00000641587 S4R3C0 116 aa7.57□□□□□ -1.2
PHGDH-222ENST00000641587 FAM223BA6NKX1 122 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 PRSS46E5RG02 174 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 H3BUA1 57 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 TAAR5O14804 337 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 NDUFB8O95169 186 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 IGHV3-23P01764 117 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 CSN3P07498 182 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 ZP3P21754 424 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 GPX4P36969 197 aaPredicted RBP7.56□□□□□ -1.2
PHGDH-222ENST00000641587 RND2P52198 227 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 ATP5G2Q06055 141 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 ZNF266Q14584 549 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 OPCMLQ14982 345 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 MLANAQ16655 118 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 C15orf32Q32M92 178 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 LAMTOR1Q6IAA8 161 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 LINC00322Q6ZN03 302 aaPredicted RBP7.56□□□□□ -1.2
PHGDH-222ENST00000641587 GTSCR1Q86UQ5 136 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 FAM223AQ8IWN6 122 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 NECAP1Q8NC96 275 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 SCGB1C1Q8TD33 95 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 EEF1AKMT3Q96AZ1 226 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 GGACTQ9BVM4 153 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 FNDC4Q9H6D8 234 aaPredicted RBP7.56□□□□□ -1.2
PHGDH-222ENST00000641587 WFDC1Q9HC57 220 aa7.56□□□□□ -1.2
PHGDH-222ENST00000641587 RBMY1BA6NDE4 496 aaKnown RBP7.55□□□□□ -1.2
PHGDH-222ENST00000641587 RBMY1EA6NEQ0 496 aaKnown RBP7.55□□□□□ -1.2
PHGDH-222ENST00000641587 MFSD2BA6NFX1 497 aa7.55□□□□□ -1.2
PHGDH-222ENST00000641587 I3L2K1 104 aa7.55□□□□□ -1.2
PHGDH-222ENST00000641587 K7EIM0 57 aa7.55□□□□□ -1.2
PHGDH-222ENST00000641587 CD7P09564 240 aa7.55□□□□□ -1.2
PHGDH-222ENST00000641587 RBMY1DP0C7P1 496 aaKnown RBP7.55□□□□□ -1.2
PHGDH-222ENST00000641587 EDN2P20800 178 aa7.55□□□□□ -1.2
PHGDH-222ENST00000641587 FGF7P21781 194 aa7.55□□□□□ -1.2
PHGDH-222ENST00000641587 MFAP4P55083 255 aa7.55□□□□□ -1.2
PHGDH-222ENST00000641587 CD81P60033 236 aa7.55□□□□□ -1.2
PHGDH-222ENST00000641587 Q56UQ5 140 aa7.55□□□□□ -1.2
PHGDH-222ENST00000641587 RPL7L1Q6DKI1 246 aaKnown RBP7.55□□□□□ -1.2
PHGDH-222ENST00000641587 PVRIGQ6DKI7 326 aa7.55□□□□□ -1.2
PHGDH-222ENST00000641587 LCN12Q6JVE5 192 aa7.55□□□□□ -1.2
PHGDH-222ENST00000641587 DEFB125Q8N687 156 aa7.55□□□□□ -1.2
PHGDH-222ENST00000641587 HSD17B11Q8NBQ5 300 aa7.55□□□□□ -1.2
PHGDH-222ENST00000641587 CACNG8Q8WXS5 425 aa7.55□□□□□ -1.2
PHGDH-222ENST00000641587 LINC00476Q8WZB0 136 aa7.55□□□□□ -1.2
PHGDH-222ENST00000641587 NPIPB3Q92617 1050 aa7.55□□□□□ -1.2
PHGDH-222ENST00000641587 CXorf58Q96LI9 332 aa7.55□□□□□ -1.2
PHGDH-222ENST00000641587 C21orf62Q9NYP8 219 aa7.55□□□□□ -1.2
PHGDH-222ENST00000641587 PCLOQ9Y6V0 5065 aa7.54□□□□□ -1.2
PHGDH-222ENST00000641587 TRBV9A0A0B4J1U6 114 aa7.54□□□□□ -1.2
PHGDH-222ENST00000641587 A0A0G2JLM5 398 aa7.54□□□□□ -1.2
PHGDH-222ENST00000641587 ZFP92A6NM28 416 aa7.54□□□□□ -1.2
PHGDH-222ENST00000641587 FNDC10F2Z333 226 aa7.54□□□□□ -1.2
PHGDH-222ENST00000641587 GNG7O60262 68 aa7.54□□□□□ -1.2
PHGDH-222ENST00000641587 SCGB2A1O75556 95 aa7.54□□□□□ -1.2
PHGDH-222ENST00000641587 NPBWR1P48145 328 aa7.54□□□□□ -1.2
PHGDH-222ENST00000641587 EIF5AP63241 154 aaKnown RBP7.54□□□□□ -1.2
PHGDH-222ENST00000641587 RAB31Q13636 194 aa7.54□□□□□ -1.2
PHGDH-222ENST00000641587 GAMTQ14353 236 aa7.54□□□□□ -1.2
PHGDH-222ENST00000641587 BTNL8Q6UX41 500 aa7.54□□□□□ -1.2
PHGDH-222ENST00000641587 ZNF709Q8N972 641 aa7.54□□□□□ -1.2
PHGDH-222ENST00000641587 VN1R17PQ8TDU5 208 aa7.54□□□□□ -1.2
PHGDH-222ENST00000641587 SCARB1Q8WTV0 552 aa7.54□□□□□ -1.2
PHGDH-222ENST00000641587 USMG5Q96IX5 58 aa7.54□□□□□ -1.2
PHGDH-222ENST00000641587 NPVFQ9HCQ7 196 aa7.54□□□□□ -1.2
PHGDH-222ENST00000641587 MRPL36Q9P0J6 103 aaKnown RBP7.54□□□□□ -1.2
PHGDH-222ENST00000641587 SELENOKQ9Y6D0 94 aa7.54□□□□□ -1.2
PHGDH-222ENST00000641587 LY6G6CO95867 125 aa7.53□□□□□ -1.2
PHGDH-222ENST00000641587 TPT1P13693 172 aaKnown RBP7.53□□□□□ -1.2
PHGDH-222ENST00000641587 OR10J1P30954 320 aa7.53□□□□□ -1.2
PHGDH-222ENST00000641587 GPR183P32249 361 aa7.53□□□□□ -1.2
PHGDH-222ENST00000641587 RPEL1Q2QD12 228 aa7.53□□□□□ -1.2
PHGDH-222ENST00000641587 VWC2Q2TAL6 325 aa7.53□□□□□ -1.2
PHGDH-222ENST00000641587 CD300EQ496F6 205 aaPredicted RBP7.53□□□□□ -1.2
PHGDH-222ENST00000641587 ZNF343Q6P1L6 599 aa7.53□□□□□ -1.2
PHGDH-222ENST00000641587 TEPPQ6URK8 271 aa7.53□□□□□ -1.2
PHGDH-222ENST00000641587 TMEM144Q7Z5S9 345 aa7.53□□□□□ -1.2
PHGDH-222ENST00000641587 SLC51BQ86UW2 128 aa7.53□□□□□ -1.2
PHGDH-222ENST00000641587 OR4X1Q8NH49 305 aa7.53□□□□□ -1.2
PHGDH-222ENST00000641587 IL17DQ8TAD2 202 aa7.53□□□□□ -1.2
PHGDH-222ENST00000641587 WDR61Q9GZS3 305 aaKnown RBP7.53□□□□□ -1.2
PHGDH-222ENST00000641587 SRD5A3Q9H8P0 318 aa7.53□□□□□ -1.2
PHGDH-222ENST00000641587 CYTL1Q9NRR1 136 aa7.53□□□□□ -1.2
PHGDH-222ENST00000641587 PEF1Q9UBV8 284 aaKnown RBP7.53□□□□□ -1.2
PHGDH-222ENST00000641587 WDR83OSQ9Y284 106 aa7.53□□□□□ -1.2
PHGDH-222ENST00000641587 TRBV7-1A0A0A6YYK4 115 aa7.52□□□□□ -1.21
PHGDH-222ENST00000641587 OR2T8A6NH00 312 aa7.52□□□□□ -1.21
PHGDH-222ENST00000641587 C17orf112F2Z3M2 114 aa7.52□□□□□ -1.21
PHGDH-222ENST00000641587 CLN5O75503 358 aa7.52□□□□□ -1.21
PHGDH-222ENST00000641587 CAMLGP49069 296 aa7.52□□□□□ -1.21
PHGDH-222ENST00000641587 PMS2P11Q13670 270 aa7.52□□□□□ -1.21
PHGDH-222ENST00000641587 KLK9Q2XQG4 91 aa7.52□□□□□ -1.21
PHGDH-222ENST00000641587 TIGITQ495A1 244 aa7.52□□□□□ -1.21
PHGDH-222ENST00000641587 CLEC19AQ6UXS0 136 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms