RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 ROS1P08922 2347 aa11.01□□□□□ -0.65
UBE3A-228ENST00000638155 UPK2O00526 184 aa11□□□□□ -0.65
UBE3A-228ENST00000638155 C1QAP02745 245 aa11□□□□□ -0.65
UBE3A-228ENST00000638155 SCRT1Q9BWW7 348 aa11□□□□□ -0.65
UBE3A-228ENST00000638155 DUSP15Q9H1R2 295 aaPredicted RBP11□□□□□ -0.65
UBE3A-228ENST00000638155 TRAV12-1A0A0B4J245 112 aa11□□□□□ -0.65
UBE3A-228ENST00000638155 OVOL1O14753 267 aa11□□□□□ -0.65
UBE3A-228ENST00000638155 TAF1LQ8IZX4 1826 aa11□□□□□ -0.65
UBE3A-228ENST00000638155 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11□□□□□ -0.65
UBE3A-228ENST00000638155 LSM4Q9Y4Z0 139 aaKnown RBP11□□□□□ -0.65
UBE3A-228ENST00000638155 RPRMLQ8N4K4 120 aa11□□□□□ -0.65
UBE3A-228ENST00000638155 METRNQ9UJH8 293 aa11□□□□□ -0.65
UBE3A-228ENST00000638155 LHFPL6Q9Y693 200 aa11□□□□□ -0.65
UBE3A-228ENST00000638155 NGFRP08138 427 aa11□□□□□ -0.65
UBE3A-228ENST00000638155 NBL1P41271 181 aa11□□□□□ -0.65
UBE3A-228ENST00000638155 TCRBV4S1A1TA0A5B7 111 aa11□□□□□ -0.65
UBE3A-228ENST00000638155 FAM219BQ5XKK7 198 aa11□□□□□ -0.65
UBE3A-228ENST00000638155 IMMP1LQ96LU5 166 aa11□□□□□ -0.65
UBE3A-228ENST00000638155 VCYO14598 125 aa10.99□□□□□ -0.65
UBE3A-228ENST00000638155 CD160O95971 181 aa10.99□□□□□ -0.65
UBE3A-228ENST00000638155 IGHV3-11P01762 117 aa10.99□□□□□ -0.65
UBE3A-228ENST00000638155 DMRTC2Q8IXT2 367 aaPredicted RBP10.99□□□□□ -0.65
UBE3A-228ENST00000638155 NBR2O15453 112 aa10.99□□□□□ -0.65
UBE3A-228ENST00000638155 C1orf194Q5T5A4 169 aa10.99□□□□□ -0.65
UBE3A-228ENST00000638155 C1orf159Q96HA4 380 aa10.99□□□□□ -0.65
UBE3A-228ENST00000638155 RPUSD1Q9UJJ7 312 aaKnown RBP10.99□□□□□ -0.65
UBE3A-228ENST00000638155 MED13LQ71F56 2210 aa10.99□□□□□ -0.65
UBE3A-228ENST00000638155 hDV102S1A0JD36 115 aa10.99□□□□□ -0.65
UBE3A-228ENST00000638155 CMC4P56277 68 aaPredicted RBP10.99□□□□□ -0.65
UBE3A-228ENST00000638155 GVINP1Q7Z2Y8 2422 aa10.99□□□□□ -0.65
UBE3A-228ENST00000638155 PLXND1Q9Y4D7 1925 aa10.99□□□□□ -0.65
UBE3A-228ENST00000638155 TRGV1A0A0A0MS02 117 aa10.99□□□□□ -0.65
UBE3A-228ENST00000638155 TRBV5-7A0A0A0MS05 114 aa10.99□□□□□ -0.65
UBE3A-228ENST00000638155 EFEMP2O95967 443 aa10.99□□□□□ -0.65
UBE3A-228ENST00000638155 TCF15Q12870 199 aa10.99□□□□□ -0.65
UBE3A-228ENST00000638155 F8W1H4 67 aa10.98□□□□□ -0.65
UBE3A-228ENST00000638155 IL18BPO95998 194 aa10.98□□□□□ -0.65
UBE3A-228ENST00000638155 RSPO4Q2I0M5 234 aaPredicted RBP10.98□□□□□ -0.65
UBE3A-228ENST00000638155 CRLF1O75462 422 aa10.98□□□□□ -0.65
UBE3A-228ENST00000638155 WBP1LQ9NX94 342 aa10.98□□□□□ -0.65
UBE3A-228ENST00000638155 PPIFP30405 207 aaKnown RBP10.98□□□□□ -0.65
UBE3A-228ENST00000638155 LTBRP36941 435 aa10.98□□□□□ -0.65
UBE3A-228ENST00000638155 LCNL1Q6ZST4 164 aa10.98□□□□□ -0.65
UBE3A-228ENST00000638155 HIST3H2BBQ8N257 126 aa10.98□□□□□ -0.65
UBE3A-228ENST00000638155 COLCA1Q6ZS62 124 aa10.98□□□□□ -0.65
UBE3A-228ENST00000638155 SLC25A39Q9BZJ4 359 aaPredicted RBP10.98□□□□□ -0.65
UBE3A-228ENST00000638155 CCL4P13236 92 aa10.98□□□□□ -0.65
UBE3A-228ENST00000638155 ZNF474Q6S9Z5 364 aaPredicted RBP10.98□□□□□ -0.65
UBE3A-228ENST00000638155 PSG8Q9UQ74 426 aa10.98□□□□□ -0.65
UBE3A-228ENST00000638155 ZNF561-AS1K7EIQ3 104 aa10.98□□□□□ -0.65
UBE3A-228ENST00000638155 SLC25A47Q6Q0C1 308 aa10.98□□□□□ -0.65
UBE3A-228ENST00000638155 C1QL4Q86Z23 238 aa10.98□□□□□ -0.65
UBE3A-228ENST00000638155 WFDC9Q8NEX5 89 aa10.98□□□□□ -0.65
UBE3A-228ENST00000638155 IGHV1-45A0A0A0MS14 117 aa10.97□□□□□ -0.65
UBE3A-228ENST00000638155 LHBP01229 141 aa10.97□□□□□ -0.65
UBE3A-228ENST00000638155 A0A0J9YW62 118 aa10.97□□□□□ -0.65
UBE3A-228ENST00000638155 C3orf36Q3SXR2 165 aa10.97□□□□□ -0.65
UBE3A-228ENST00000638155 HEPN1Q6WQI6 88 aa10.97□□□□□ -0.65
UBE3A-228ENST00000638155 PLXNB1O43157 2135 aa10.97□□□□□ -0.65
UBE3A-228ENST00000638155 STRCP1A6NGW2 1772 aa10.97□□□□□ -0.65
UBE3A-228ENST00000638155 FCN3O75636 299 aa10.97□□□□□ -0.65
UBE3A-228ENST00000638155 MPV17L2Q567V2 206 aa10.97□□□□□ -0.65
UBE3A-228ENST00000638155 TMEM242Q9NWH2 141 aa10.97□□□□□ -0.65
UBE3A-228ENST00000638155 C15orf61A6NNL5 157 aa10.97□□□□□ -0.65
UBE3A-228ENST00000638155 SPXQ9BT56 116 aa10.97□□□□□ -0.65
UBE3A-228ENST00000638155 CSTL1Q9H114 145 aa10.97□□□□□ -0.65
UBE3A-228ENST00000638155 TET1Q8NFU7 2136 aa10.97□□□□□ -0.65
UBE3A-228ENST00000638155 COX5BP10606 129 aa10.97□□□□□ -0.65
UBE3A-228ENST00000638155 APOBEC3AP31941 199 aaPredicted RBP10.97□□□□□ -0.65
UBE3A-228ENST00000638155 AMBPP02760 352 aa10.97□□□□□ -0.65
UBE3A-228ENST00000638155 ZNF876PQ49A33 203 aa10.97□□□□□ -0.65
UBE3A-228ENST00000638155 ZAR1Q86SH2 424 aa10.97□□□□□ -0.65
UBE3A-228ENST00000638155 IFITM3Q01628 133 aa10.96□□□□□ -0.65
UBE3A-228ENST00000638155 PCOLCEQ15113 449 aa10.96□□□□□ -0.65
UBE3A-228ENST00000638155 TIMP3P35625 211 aa10.96□□□□□ -0.65
UBE3A-228ENST00000638155 SLC25A28Q96A46 364 aa10.96□□□□□ -0.65
UBE3A-228ENST00000638155 SYS1-DBNDD2H3BUS1 97 aa10.96□□□□□ -0.66
UBE3A-228ENST00000638155 IGHG2P01859 326 aa10.96□□□□□ -0.66
UBE3A-228ENST00000638155 SEC61GP60059 68 aa10.96□□□□□ -0.66
UBE3A-228ENST00000638155 TANC2Q9HCD6 1990 aa10.96□□□□□ -0.66
UBE3A-228ENST00000638155 Q5BKY6 102 aa10.96□□□□□ -0.66
UBE3A-228ENST00000638155 C17orf98A8MV24 154 aa10.95□□□□□ -0.66
UBE3A-228ENST00000638155 GATA2P23769 480 aaPredicted RBP10.95□□□□□ -0.66
UBE3A-228ENST00000638155 NSUN5P1Q3KNT7 163 aa10.95□□□□□ -0.66
UBE3A-228ENST00000638155 A0A1W2PPV9 198 aa10.95□□□□□ -0.66
UBE3A-228ENST00000638155 CEACAM1P13688 526 aa10.95□□□□□ -0.66
UBE3A-228ENST00000638155 LY6G5BQ8NDX9 201 aa10.95□□□□□ -0.66
UBE3A-228ENST00000638155 J3QW42 95 aa10.95□□□□□ -0.66
UBE3A-228ENST00000638155 TEX38Q6PEX7 206 aa10.95□□□□□ -0.66
UBE3A-228ENST00000638155 C3orf56Q8N813 242 aa10.95□□□□□ -0.66
UBE3A-228ENST00000638155 LIMS1P48059 325 aa10.95□□□□□ -0.66
UBE3A-228ENST00000638155 C8orf46Q8TAG6 207 aa10.95□□□□□ -0.66
UBE3A-228ENST00000638155 IGHMP01871 453 aa10.95□□□□□ -0.66
UBE3A-228ENST00000638155 PAX8Q06710 450 aa10.95□□□□□ -0.66
UBE3A-228ENST00000638155 ANKRD29Q8N6D5 301 aa10.94□□□□□ -0.66
UBE3A-228ENST00000638155 SHISA9B4DS77 424 aa10.94□□□□□ -0.66
UBE3A-228ENST00000638155 KLRD1Q13241 179 aa10.94□□□□□ -0.66
UBE3A-228ENST00000638155 LINC00312Q9Y6C7 94 aa10.94□□□□□ -0.66
UBE3A-228ENST00000638155 IGKV1D-16P01601 117 aa10.94□□□□□ -0.66
UBE3A-228ENST00000638155 PRB4P10163 310 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms