RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 C5orf64Q2M2E5 130 aa17.05■□□□□ 0.32
CLN6-224ENST00000638076 CCDC144NLQ6NUI1 221 aa17.05■□□□□ 0.32
CLN6-224ENST00000638076 GSN-AS1Q9NRJ2 163 aa17.05■□□□□ 0.32
CLN6-224ENST00000638076 TRAV9-1A0A075B6T8 112 aa17.05■□□□□ 0.32
CLN6-224ENST00000638076 PEX7O00628 323 aa17.05■□□□□ 0.32
CLN6-224ENST00000638076 LYZP61626 148 aa17.05■□□□□ 0.32
CLN6-224ENST00000638076 NHLRC2Q8NBF2 726 aa17.05■□□□□ 0.32
CLN6-224ENST00000638076 PACRGQ96M98 296 aaPredicted RBP17.05■□□□□ 0.32
CLN6-224ENST00000638076 RASL11BQ9BPW5 248 aa17.05■□□□□ 0.32
CLN6-224ENST00000638076 OSTCQ9NRP0 149 aa17.05■□□□□ 0.32
CLN6-224ENST00000638076 K7EIM0 57 aa17.04■□□□□ 0.32
CLN6-224ENST00000638076 FABP1P07148 127 aa17.04■□□□□ 0.32
CLN6-224ENST00000638076 MYCNOSP40205 109 aa17.04■□□□□ 0.32
CLN6-224ENST00000638076 LEMD1Q68G75 181 aa17.04■□□□□ 0.32
CLN6-224ENST00000638076 PDLIM4P50479 330 aa17.04■□□□□ 0.32
CLN6-224ENST00000638076 SIRPDQ9H106 197 aa17.04■□□□□ 0.32
CLN6-224ENST00000638076 HIGD1AQ9Y241 93 aa17.04■□□□□ 0.32
CLN6-224ENST00000638076 ASH1LQ9NR48 2969 aaKnown RBP17.04■□□□□ 0.32
CLN6-224ENST00000638076 ISLRO14498 428 aa17.03■□□□□ 0.32
CLN6-224ENST00000638076 NBEAP1P0C6P0 100 aa17.03■□□□□ 0.32
CLN6-224ENST00000638076 YPEL3P61236 119 aaPredicted RBP17.03■□□□□ 0.32
CLN6-224ENST00000638076 IBA57Q5T440 356 aaKnown RBP17.03■□□□□ 0.32
CLN6-224ENST00000638076 TRAV34A0A0B4J273 112 aa17.03■□□□□ 0.32
CLN6-224ENST00000638076 NCBP2LA6PVI3 153 aaKnown RBP17.03■□□□□ 0.32
CLN6-224ENST00000638076 GP9P14770 177 aa17.03■□□□□ 0.32
CLN6-224ENST00000638076 GNG5P63218 68 aa17.03■□□□□ 0.32
CLN6-224ENST00000638076 MINOS1Q5TGZ0 78 aa17.03■□□□□ 0.32
CLN6-224ENST00000638076 OR8I2Q8N0Y5 310 aa17.03■□□□□ 0.32
CLN6-224ENST00000638076 MINOS1-NBL1R4GNA1 71 aa17.03■□□□□ 0.32
CLN6-224ENST00000638076 IGKV1-17P01599 117 aa17.02■□□□□ 0.32
CLN6-224ENST00000638076 ABCA1O95477 2261 aa17.02■□□□□ 0.32
CLN6-224ENST00000638076 OOSP1A8MZH6 123 aa17.02■□□□□ 0.31
CLN6-224ENST00000638076 HIST1H1BP16401 226 aaKnown RBP17.02■□□□□ 0.31
CLN6-224ENST00000638076 CBLN1P23435 193 aa17.02■□□□□ 0.31
CLN6-224ENST00000638076 KLF17Q5JT82 389 aaPredicted RBP17.02■□□□□ 0.31
CLN6-224ENST00000638076 CDPF1Q6NVV7 123 aa17.02■□□□□ 0.31
CLN6-224ENST00000638076 OR1L6Q8NGR2 347 aa17.02■□□□□ 0.31
CLN6-224ENST00000638076 PGPA6NDG6 321 aa17.01■□□□□ 0.31
CLN6-224ENST00000638076 AMBPP02760 352 aa17.01■□□□□ 0.31
CLN6-224ENST00000638076 SLC25A5P05141 298 aaKnown RBP17.01■□□□□ 0.31
CLN6-224ENST00000638076 ADMP35318 185 aa17.01■□□□□ 0.31
CLN6-224ENST00000638076 RBM14Q96PK6 669 aaKnown RBP17.01■□□□□ 0.31
CLN6-224ENST00000638076 BPESC1Q9GZL8 116 aa17.01■□□□□ 0.31
CLN6-224ENST00000638076 EPDR1Q9UM22 224 aa17.01■□□□□ 0.31
CLN6-224ENST00000638076 CSMD1Q96PZ7 3565 aa17.01■□□□□ 0.31
CLN6-224ENST00000638076 IGHV2-70DA0A0C4DH43 119 aa17.01■□□□□ 0.31
CLN6-224ENST00000638076 RD3LP0DJH9 198 aa17.01■□□□□ 0.31
CLN6-224ENST00000638076 ZNF562Q6V9R5 426 aa17.01■□□□□ 0.31
CLN6-224ENST00000638076 BAGE2Q86Y30 109 aa17.01■□□□□ 0.31
CLN6-224ENST00000638076 LINC00587B1AMM8 73 aa17■□□□□ 0.31
CLN6-224ENST00000638076 H3BTX0 84 aa17■□□□□ 0.31
CLN6-224ENST00000638076 TOX4O94842 621 aa17■□□□□ 0.31
CLN6-224ENST00000638076 CX3CL1P78423 397 aa17■□□□□ 0.31
CLN6-224ENST00000638076 Q8N6K4 173 aa17■□□□□ 0.31
CLN6-224ENST00000638076 SLC25A39Q9BZJ4 359 aaPredicted RBP17■□□□□ 0.31
CLN6-224ENST00000638076 SERTAD4Q9NUC0 356 aa17■□□□□ 0.31
CLN6-224ENST00000638076 ARPC1AQ92747 370 aa16.99■□□□□ 0.31
CLN6-224ENST00000638076 FRMD6-AS1P0C7T7 363 aa16.99■□□□□ 0.31
CLN6-224ENST00000638076 IER3P46695 156 aa16.99■□□□□ 0.31
CLN6-224ENST00000638076 NDPQ00604 133 aa16.99■□□□□ 0.31
CLN6-224ENST00000638076 EBI3Q14213 229 aa16.99■□□□□ 0.31
CLN6-224ENST00000638076 ASPHD1Q5U4P2 390 aa16.99■□□□□ 0.31
CLN6-224ENST00000638076 ZNF600Q6ZNG1 722 aa16.99■□□□□ 0.31
CLN6-224ENST00000638076 TMEM11P17152 192 aa16.98■□□□□ 0.31
CLN6-224ENST00000638076 RPH3ALQ9UNE2 315 aa16.98■□□□□ 0.31
CLN6-224ENST00000638076 S4R3C0 116 aa16.98■□□□□ 0.31
CLN6-224ENST00000638076 ZNF705GA8MUZ8 300 aaPredicted RBP16.98■□□□□ 0.31
CLN6-224ENST00000638076 TCL1AP56279 114 aa16.98■□□□□ 0.31
CLN6-224ENST00000638076 LMO4P61968 165 aa16.98■□□□□ 0.31
CLN6-224ENST00000638076 UBE2G1P62253 170 aa16.98■□□□□ 0.31
CLN6-224ENST00000638076 TMEM183BQ1AE95 376 aa16.98■□□□□ 0.31
CLN6-224ENST00000638076 FAM209BQ5JX69 171 aa16.98■□□□□ 0.31
CLN6-224ENST00000638076 MRPL18Q9H0U6 180 aaKnown RBP16.98■□□□□ 0.31
CLN6-224ENST00000638076 MRPL27Q9P0M9 148 aaKnown RBP16.98■□□□□ 0.31
CLN6-224ENST00000638076 NPIPB5A8MRT5 1133 aa16.97■□□□□ 0.31
CLN6-224ENST00000638076 SPINK4O60575 86 aa16.97■□□□□ 0.31
CLN6-224ENST00000638076 SGK494Q96LW2 274 aa16.97■□□□□ 0.31
CLN6-224ENST00000638076 TBX15Q96SF7 602 aa16.97■□□□□ 0.31
CLN6-224ENST00000638076 Q9H3A6 140 aa16.97■□□□□ 0.31
CLN6-224ENST00000638076 FANCD2OSQ96PS1 177 aa16.97■□□□□ 0.31
CLN6-224ENST00000638076 WNK2Q9Y3S1 2297 aa16.97■□□□□ 0.31
CLN6-224ENST00000638076 SVEP1Q4LDE5 3571 aa16.96■□□□□ 0.31
CLN6-224ENST00000638076 SNURFLB1AK76 121 aa16.96■□□□□ 0.31
CLN6-224ENST00000638076 CA1P00915 261 aaPredicted RBP16.96■□□□□ 0.31
CLN6-224ENST00000638076 UBE2E1P51965 193 aa16.96■□□□□ 0.31
CLN6-224ENST00000638076 SLC35B1P78383 322 aa16.96■□□□□ 0.31
CLN6-224ENST00000638076 TBL2Q9Y4P3 447 aaKnown RBP16.96■□□□□ 0.31
CLN6-224ENST00000638076 IGLV11-55A0A075B6I3 123 aa16.96■□□□□ 0.3
CLN6-224ENST00000638076 A0A1B0GUS0 222 aa16.96■□□□□ 0.3
CLN6-224ENST00000638076 SMIM27A0A1W2PRY6 76 aa16.96■□□□□ 0.3
CLN6-224ENST00000638076 OVOL3O00110 214 aa16.96■□□□□ 0.3
CLN6-224ENST00000638076 C5orf17Q8NAS9 161 aa16.96■□□□□ 0.3
CLN6-224ENST00000638076 TMEM14CQ9P0S9 112 aa16.96■□□□□ 0.3
CLN6-224ENST00000638076 MED13LQ71F56 2210 aa16.95■□□□□ 0.3
CLN6-224ENST00000638076 PKD1L2Q7Z442 2459 aa16.95■□□□□ 0.3
CLN6-224ENST00000638076 TTC9CQ8N5M4 171 aa16.95■□□□□ 0.3
CLN6-224ENST00000638076 FAM168AQ92567 244 aa16.95■□□□□ 0.3
CLN6-224ENST00000638076 ATG101Q9BSB4 218 aa16.95■□□□□ 0.3
CLN6-224ENST00000638076 TOMM40O96008 361 aa16.95■□□□□ 0.3
CLN6-224ENST00000638076 PRR27Q6MZM9 219 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms