RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 TCEAL7Q9BRU2 100 aa4.95□□□□□ -1.62
CACNA1D-227ENST00000637844 SLC25A2Q9BXI2 301 aa4.95□□□□□ -1.62
CACNA1D-227ENST00000637844 PARLQ9H300 379 aa4.95□□□□□ -1.62
CACNA1D-227ENST00000637844 GNB4Q9HAV0 340 aa4.95□□□□□ -1.62
CACNA1D-227ENST00000637844 SPTBN1Q01082 2364 aaKnown RBP4.95□□□□□ -1.62
CACNA1D-227ENST00000637844 SMG1Q96Q15 3661 aaKnown RBP4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 A0A087WWC5 75 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 TRAV5A0A0B4J249 113 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 OR2T8A6NH00 312 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 SH2D7A6NKC9 451 aaPredicted RBP4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 DNASE2O00115 360 aaPredicted RBP4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 BMPR1BO00238 502 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 SMAD7O15105 426 aaKnown RBP4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 OR2C1O95371 312 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 BRI3O95415 125 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 MT-ND4LP03901 98 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 TRGV3P03979 118 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 OR10J4P0C629 311 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 HNF1AP20823 631 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 SRP14P37108 136 aaKnown RBP4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 IER3P46695 156 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 RAB9AP51151 201 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 RELQ04864 619 aaPredicted RBP4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 KIAA0141Q14154 515 aaPredicted RBP4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 ADIRFQ15847 76 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 KLK9Q2XQG4 91 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 FAM209BQ5JX69 171 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 TMEM88Q6PEY1 159 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 PATE2Q6UY27 113 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 ZNF600Q6ZNG1 722 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 BPIFA4PQ86YQ2 179 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 C15orf54Q8N8G6 183 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 OR4F17Q8NGA8 305 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 RNF125Q96EQ8 232 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 FAM167A-AS1Q96KT0 104 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 MS4A10Q96PG2 267 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 SLC25A39Q9BZJ4 359 aaPredicted RBP4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 CTDSP1Q9GZU7 261 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 GSX1Q9H4S2 264 aaPredicted RBP4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 TUBA4BQ9H853 241 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 SDF2L1Q9HCN8 221 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 TMEM14CQ9P0S9 112 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 RABAC1Q9UI14 185 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 ZNF580Q9UK33 172 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 KLK9Q9UKQ9 250 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 TMA7Q9Y2S6 64 aaKnown RBP4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 YTHDF2Q9Y5A9 579 aaKnown RBP4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 ZNF462Q96JM2 2506 aa4.94□□□□□ -1.62
CACNA1D-227ENST00000637844 FLNBO75369 2602 aaKnown RBP4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 GCN1Q92616 2671 aaKnown RBP4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 TRBV9A0A0B4J1U6 114 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 A0A0G2JLM5 398 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 MDFIC2A0A1B0GVS7 189 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 SCO2A0A1W2PP80 73 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 WI2-2373I1.2A0A1W2PRP0 233 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 CXorf65A6NEN9 183 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 HELTA6NFD8 242 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 G3V318 75 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 PPP1R2P9O14990 202 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 NDUFB4O95168 129 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 FSHBP01225 129 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 IGKV1-17P01599 117 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 IGHV3-23P01764 117 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 IGHV4-59P01825 116 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 NBEAP1P0C6P0 100 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 PYYP10082 97 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 S100PP25815 95 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 GPR183P32249 361 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 AKR1C3P42330 323 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 CNN1P51911 297 aaKnown RBP4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 TPPP2P59282 170 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 SUMO1P63165 101 aaKnown RBP4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 SLC35B1P78383 322 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 HIST2H2BCQ6DN03 193 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 Q6YL49 198 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 KRTAP1-3Q8IUG1 177 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 CBLN2Q8IUK8 224 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 BCL6BQ8N143 479 aaPredicted RBP4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 ZNF491Q8N8L2 437 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 ZNF502Q8TBZ5 544 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 C11orf52Q96A22 123 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 ANAPC16Q96DE5 110 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 USMG5Q96IX5 58 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 OR5B12Q96R08 314 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 SHANK2-AS3Q9BTD1 123 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 PRSS22Q9GZN4 317 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 NPFFR1Q9GZQ6 430 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 MRPL27Q9P0M9 148 aaKnown RBP4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 VPREB3Q9UKI3 123 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 S4R3C0 116 aa4.93□□□□□ -1.62
CACNA1D-227ENST00000637844 CR1P17927 2039 aa4.92□□□□□ -1.62
CACNA1D-227ENST00000637844 TMEM89A2RUT3 159 aa4.92□□□□□ -1.62
CACNA1D-227ENST00000637844 LINC01548A6NM66 108 aa4.92□□□□□ -1.62
CACNA1D-227ENST00000637844 C9JCJ5 164 aa4.92□□□□□ -1.62
CACNA1D-227ENST00000637844 H3BRN7 92 aa4.92□□□□□ -1.62
CACNA1D-227ENST00000637844 H7BYZ3 331 aa4.92□□□□□ -1.62
CACNA1D-227ENST00000637844 CLDN34H7C241 214 aa4.92□□□□□ -1.62
CACNA1D-227ENST00000637844 HOXA3O43365 443 aaPredicted RBP4.92□□□□□ -1.62
CACNA1D-227ENST00000637844 TGOLN2O43493 480 aa4.92□□□□□ -1.62
CACNA1D-227ENST00000637844 AMY1AP04745 511 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms