RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 CR1P17927 2039 aa16.99■□□□□ 0.31
CHRNA7-228ENST00000637519 F8W735 103 aaPredicted RBP16.99■□□□□ 0.31
CHRNA7-228ENST00000637519 IGHV4-31P0DP07 118 aa16.99■□□□□ 0.31
CHRNA7-228ENST00000637519 UBE2L3P68036 154 aaKnown RBP16.99■□□□□ 0.31
CHRNA7-228ENST00000637519 PQLC2Q6ZP29 291 aa16.99■□□□□ 0.31
CHRNA7-228ENST00000637519 CSPG4Q6UVK1 2322 aa16.99■□□□□ 0.31
CHRNA7-228ENST00000637519 GATA3P23771 443 aa16.98■□□□□ 0.31
CHRNA7-228ENST00000637519 C9orf152Q5JTZ5 239 aa16.98■□□□□ 0.31
CHRNA7-228ENST00000637519 PDE6DO43924 150 aa16.98■□□□□ 0.31
CHRNA7-228ENST00000637519 ADIRFQ15847 76 aa16.98■□□□□ 0.31
CHRNA7-228ENST00000637519 AURKAIP1Q9NWT8 199 aaPredicted RBP16.98■□□□□ 0.31
CHRNA7-228ENST00000637519 HYPMO75409 117 aa16.97■□□□□ 0.31
CHRNA7-228ENST00000637519 ATF4P18848 351 aaPredicted RBP16.97■□□□□ 0.31
CHRNA7-228ENST00000637519 LRRC75A-AS1Q8N1F1 130 aa16.97■□□□□ 0.31
CHRNA7-228ENST00000637519 RNF2Q99496 336 aa16.97■□□□□ 0.31
CHRNA7-228ENST00000637519 TMEM167BQ9NRX6 74 aa16.97■□□□□ 0.31
CHRNA7-228ENST00000637519 NAT8Q9UHE5 227 aa16.97■□□□□ 0.31
CHRNA7-228ENST00000637519 FBXL7Q9UJT9 491 aa16.97■□□□□ 0.31
CHRNA7-228ENST00000637519 PGPEP1LA6NFU8 196 aa16.97■□□□□ 0.31
CHRNA7-228ENST00000637519 GGTLC3B5MD39 225 aa16.97■□□□□ 0.31
CHRNA7-228ENST00000637519 Q56UQ5 140 aa16.97■□□□□ 0.31
CHRNA7-228ENST00000637519 PAXXQ9BUH6 204 aa16.97■□□□□ 0.31
CHRNA7-228ENST00000637519 ELOA3CA0A087WX78 387 aaPredicted RBP16.96■□□□□ 0.31
CHRNA7-228ENST00000637519 COLCA2A8K830 154 aa16.96■□□□□ 0.31
CHRNA7-228ENST00000637519 GNG7O60262 68 aa16.96■□□□□ 0.31
CHRNA7-228ENST00000637519 RD3LP0DJH9 198 aa16.96■□□□□ 0.31
CHRNA7-228ENST00000637519 TMEM241Q24JQ0 296 aa16.96■□□□□ 0.31
CHRNA7-228ENST00000637519 FAM110DQ8TAY7 271 aaPredicted RBP16.96■□□□□ 0.31
CHRNA7-228ENST00000637519 C21orf62Q9NYP8 219 aa16.96■□□□□ 0.31
CHRNA7-228ENST00000637519 RPL23P62829 140 aaKnown RBP16.95■□□□□ 0.3
CHRNA7-228ENST00000637519 C16orf82Q7Z2V1 217 aa16.95■□□□□ 0.3
CHRNA7-228ENST00000637519 MS4A10Q96PG2 267 aa16.95■□□□□ 0.3
CHRNA7-228ENST00000637519 A6NDX4 124 aa16.95■□□□□ 0.3
CHRNA7-228ENST00000637519 OR2T8A6NH00 312 aa16.95■□□□□ 0.3
CHRNA7-228ENST00000637519 OR51M1Q9H341 326 aa16.95■□□□□ 0.3
CHRNA7-228ENST00000637519 TRBV20OR9-2A0A075B6H5 130 aa16.94■□□□□ 0.3
CHRNA7-228ENST00000637519 F6UZH7 168 aa16.94■□□□□ 0.3
CHRNA7-228ENST00000637519 OR2C1O95371 312 aa16.94■□□□□ 0.3
CHRNA7-228ENST00000637519 MFAP4P55083 255 aa16.94■□□□□ 0.3
CHRNA7-228ENST00000637519 PNRC1Q12796 327 aaPredicted RBP16.94■□□□□ 0.3
CHRNA7-228ENST00000637519 DEFB112Q30KQ8 113 aa16.94■□□□□ 0.3
CHRNA7-228ENST00000637519 ZNF343Q6P1L6 599 aa16.94■□□□□ 0.3
CHRNA7-228ENST00000637519 FAM24BQ8N5W8 94 aa16.94■□□□□ 0.3
CHRNA7-228ENST00000637519 FXYD5Q96DB9 178 aa16.94■□□□□ 0.3
CHRNA7-228ENST00000637519 H3BTX0 84 aa16.93■□□□□ 0.3
CHRNA7-228ENST00000637519 PLP1P60201 277 aa16.93■□□□□ 0.3
CHRNA7-228ENST00000637519 RHOGP84095 191 aa16.93■□□□□ 0.3
CHRNA7-228ENST00000637519 Q6ZS46 218 aa16.93■□□□□ 0.3
CHRNA7-228ENST00000637519 THYN1Q9P016 225 aa16.93■□□□□ 0.3
CHRNA7-228ENST00000637519 HIGD1AQ9Y241 93 aa16.93■□□□□ 0.3
CHRNA7-228ENST00000637519 URGCP-MRPS24S4R325 110 aa16.93■□□□□ 0.3
CHRNA7-228ENST00000637519 IL4P05112 153 aa16.93■□□□□ 0.3
CHRNA7-228ENST00000637519 C15orf32Q32M92 178 aa16.93■□□□□ 0.3
CHRNA7-228ENST00000637519 HNF1AP20823 631 aa16.92■□□□□ 0.3
CHRNA7-228ENST00000637519 CRYBB3P26998 211 aa16.92■□□□□ 0.3
CHRNA7-228ENST00000637519 BLCAPP62952 87 aa16.92■□□□□ 0.3
CHRNA7-228ENST00000637519 SUMO1P63165 101 aaKnown RBP16.92■□□□□ 0.3
CHRNA7-228ENST00000637519 RNF212Q495C1 297 aa16.92■□□□□ 0.3
CHRNA7-228ENST00000637519 WFDC11Q8NEX6 87 aa16.92■□□□□ 0.3
CHRNA7-228ENST00000637519 BLNKQ8WV28 456 aa16.92■□□□□ 0.3
CHRNA7-228ENST00000637519 HIST1H2BAQ96A08 127 aa16.92■□□□□ 0.3
CHRNA7-228ENST00000637519 IGHV3-35A0A0C4DH35 117 aa16.92■□□□□ 0.3
CHRNA7-228ENST00000637519 TOMM40O96008 361 aa16.92■□□□□ 0.3
CHRNA7-228ENST00000637519 IGHV4-59P01825 116 aa16.92■□□□□ 0.3
CHRNA7-228ENST00000637519 TXNDC17Q9BRA2 123 aa16.92■□□□□ 0.3
CHRNA7-228ENST00000637519 SLC25A39Q9BZJ4 359 aaPredicted RBP16.92■□□□□ 0.3
CHRNA7-228ENST00000637519 CREBBPQ92793 2442 aa16.92■□□□□ 0.3
CHRNA7-228ENST00000637519 PRRC2AP48634 2157 aaKnown RBP16.92■□□□□ 0.3
CHRNA7-228ENST00000637519 J3QLI3 93 aa16.91■□□□□ 0.3
CHRNA7-228ENST00000637519 NDUFS6O75380 124 aaKnown RBP16.91■□□□□ 0.3
CHRNA7-228ENST00000637519 CIARTQ8N365 385 aaPredicted RBP16.91■□□□□ 0.3
CHRNA7-228ENST00000637519 C15orf54Q8N8G6 183 aa16.91■□□□□ 0.3
CHRNA7-228ENST00000637519 ZNF491Q8N8L2 437 aa16.91■□□□□ 0.3
CHRNA7-228ENST00000637519 RNF125Q96EQ8 232 aa16.91■□□□□ 0.3
CHRNA7-228ENST00000637519 NOL4LQ96MY1 436 aaPredicted RBP16.91■□□□□ 0.3
CHRNA7-228ENST00000637519 CHRDL1Q9BU40 450 aa16.91■□□□□ 0.3
CHRNA7-228ENST00000637519 A0A087WWC5 75 aa16.9■□□□□ 0.3
CHRNA7-228ENST00000637519 TSPAN9O75954 239 aa16.9■□□□□ 0.3
CHRNA7-228ENST00000637519 USF2Q15853 346 aaPredicted RBP16.9■□□□□ 0.3
CHRNA7-228ENST00000637519 IGHV3OR16-8A0A075B7F1 116 aa16.9■□□□□ 0.3
CHRNA7-228ENST00000637519 TRAV41A0A0B4J266 112 aa16.9■□□□□ 0.3
CHRNA7-228ENST00000637519 GP9P14770 177 aa16.9■□□□□ 0.3
CHRNA7-228ENST00000637519 GPR183P32249 361 aa16.9■□□□□ 0.3
CHRNA7-228ENST00000637519 MBD6Q96DN6 1003 aa16.9■□□□□ 0.3
CHRNA7-228ENST00000637519 ELOVL1Q9BW60 279 aa16.9■□□□□ 0.3
CHRNA7-228ENST00000637519 MRPL27Q9P0M9 148 aaKnown RBP16.9■□□□□ 0.3
CHRNA7-228ENST00000637519 ADMP35318 185 aa16.89■□□□□ 0.29
CHRNA7-228ENST00000637519 LINC01551Q86U37 167 aa16.89■□□□□ 0.29
CHRNA7-228ENST00000637519 C11orf52Q96A22 123 aa16.89■□□□□ 0.29
CHRNA7-228ENST00000637519 YPEL4Q96NS1 127 aa16.89■□□□□ 0.29
CHRNA7-228ENST00000637519 TUBA4BQ9H853 241 aa16.89■□□□□ 0.29
CHRNA7-228ENST00000637519 ARL2-SNX15V9GYD0 113 aa16.89■□□□□ 0.29
CHRNA7-228ENST00000637519 TRBV9A0A0B4J1U6 114 aa16.89■□□□□ 0.29
CHRNA7-228ENST00000637519 CTSGP08311 255 aa16.89■□□□□ 0.29
CHRNA7-228ENST00000637519 ZNF48Q96MX3 618 aaPredicted RBP16.89■□□□□ 0.29
CHRNA7-228ENST00000637519 A0A1W2PRE2 83 aa16.88■□□□□ 0.29
CHRNA7-228ENST00000637519 B4DEV8 164 aa16.88■□□□□ 0.29
CHRNA7-228ENST00000637519 CRYBA1P05813 215 aa16.88■□□□□ 0.29
CHRNA7-228ENST00000637519 RPL35P42766 123 aaKnown RBP16.88■□□□□ 0.29
CHRNA7-228ENST00000637519 RANP62826 216 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms