RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 HLA-DMBP28068 263 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 ASIPP42127 132 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 RPS10P46783 165 aaKnown RBP2.22□□□□□ -2.05
VIM-210ENST00000637053 POLR2JP52435 117 aaKnown RBP2.22□□□□□ -2.05
VIM-210ENST00000637053 ZNF136P52737 540 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 GNG11P61952 73 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 SNRPD3P62318 126 aaKnown RBP2.22□□□□□ -2.05
VIM-210ENST00000637053 ADIRFQ15847 76 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 LGALS9CQ6DKI2 356 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 REG3GQ6UW15 175 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 SLC25A42Q86VD7 318 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 LINC01555Q8NAE3 123 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 ZNF555Q8NEP9 628 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 PRSS3P2Q8NHM4 247 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 VSTM2AQ8TAG5 236 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 TAF15Q92804 592 aaKnown RBP eCLIP2.22□□□□□ -2.05
VIM-210ENST00000637053 S100A16Q96FQ6 103 aaKnown RBP2.22□□□□□ -2.05
VIM-210ENST00000637053 IMMP2LQ96T52 175 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 PYGO2Q9BRQ0 406 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 PLEKHF2Q9H8W4 249 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 ST20Q9HBF5 79 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 ZNF286AQ9HBT8 521 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 SLC39A9Q9NUM3 307 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 AIG1Q9NVV5 245 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 TXNL4BQ9NX01 149 aaKnown RBP2.22□□□□□ -2.05
VIM-210ENST00000637053 CACFD1Q9UGQ2 172 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 LSM2Q9Y333 95 aaKnown RBP2.22□□□□□ -2.05
VIM-210ENST00000637053 LINC00588Q9Y4M8 146 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 DNAJC15Q9Y5T4 150 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 RBBP6Q7Z6E9 1792 aaKnown RBP2.22□□□□□ -2.05
VIM-210ENST00000637053 ARAP2Q8WZ64 1704 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 ABCA3Q99758 1704 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 CHD3Q12873 2000 aaKnown RBP2.22□□□□□ -2.05
VIM-210ENST00000637053 PLIN4Q96Q06 1357 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 PREX2Q70Z35 1606 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 IGHV1-45A0A0A0MS14 117 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 IGHV7-81A0A0B4J1V7 117 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 C7orf66A4D0T2 115 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 FAM24AA6NFZ4 105 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 K7ERJ3 54 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 YPEL1O60688 119 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 HYPMO75409 117 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 SIX6O95475 246 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 CD3DP04234 171 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 TRGC1P0CF51 173 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 ZNF883P0CG24 379 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 T-ENOLP0DO92 83 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 SLC25A4P12235 298 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 COX7CP15954 63 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 ZNF823P16415 610 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 CSN1S1P47710 185 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 DYNLT3P51808 116 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 UBE2BP63146 152 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 SEC11AP67812 179 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 CCL20P78556 96 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 CXCL6P80162 114 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 CCDC88AQ3V6T2 1871 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 TMEM155Q4W5P6 130 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 CROCCQ5TZA2 2017 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 SUMO4Q6EEV6 95 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 LAIR2Q6ISS4 152 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 Q6ZTC4 211 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 ZNF101Q8IZC7 436 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 TMEM252Q8N6L7 170 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 ZNF645Q8N7E2 425 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 C3orf56Q8N813 242 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 MORN4Q8NDC4 146 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 FAM57AQ8TBR7 257 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 PRELID3AQ96N28 172 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 YPEL2Q96QA6 119 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 C20orf78Q9BR46 151 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 SLC35B3Q9H1N7 401 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 BCL2L10Q9HD36 194 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 KLK13Q9UKR3 277 aa2.21□□□□□ -2.06
VIM-210ENST00000637053 KLK5Q9Y337 293 aaPredicted RBP2.21□□□□□ -2.06
VIM-210ENST00000637053 SCN5AQ14524 2016 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 FER1L6Q2WGJ9 1857 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 MYH9P35579 1960 aaKnown RBP2.2□□□□□ -2.06
VIM-210ENST00000637053 SIPA1L1O43166 1804 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 IGKV6D-21A0A0A0MT36 114 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 C7orf77A4D0Y5 90 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 RBAKDNA6NC62 111 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 TMEM235A6NFC5 223 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 C9JCJ5 164 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 GNGT2O14610 69 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 OR1I1O60431 355 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 IGHV3-48P01763 117 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 HBDP02042 147 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 C1QAP02745 245 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 BGLAPP02818 100 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 PRM2P04554 102 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 GYPBP06028 91 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 CHTF8P0CG12 524 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 Q0VFX4 171 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 LINC01554Q52M75 96 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 ORMDL2Q53FV1 153 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 BVES-AS1Q5T3Y7 98 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 ADAMTSL4-AS1Q5T5F5 129 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 ZC2HC1BQ5TFG8 222 aa2.2□□□□□ -2.06
VIM-210ENST00000637053 DPPA3Q6W0C5 159 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms