RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 FAM168AQ92567 244 aa8.75□□□□□ -1.01
CHD2-223ENST00000636306 ZNF747Q9BV97 191 aa8.75□□□□□ -1.01
CHD2-223ENST00000636306 DNAJC13O75165 2243 aa8.75□□□□□ -1.01
CHD2-223ENST00000636306 KNTC1P50748 2209 aa8.75□□□□□ -1.01
CHD2-223ENST00000636306 FREM1Q5H8C1 2179 aa8.75□□□□□ -1.01
CHD2-223ENST00000636306 USP34Q70CQ2 3546 aa8.74□□□□□ -1.01
CHD2-223ENST00000636306 FOXH1O75593 365 aa8.74□□□□□ -1.01
CHD2-223ENST00000636306 FCGR2BP31994 310 aaPredicted RBP8.74□□□□□ -1.01
CHD2-223ENST00000636306 WFDC2Q14508 124 aa8.74□□□□□ -1.01
CHD2-223ENST00000636306 CT83Q5H943 113 aa8.74□□□□□ -1.01
CHD2-223ENST00000636306 C8orf46Q8TAG6 207 aa8.74□□□□□ -1.01
CHD2-223ENST00000636306 PIFOQ8TCI5 191 aa8.74□□□□□ -1.01
CHD2-223ENST00000636306 CNTRLQ7Z7A1 2325 aa8.74□□□□□ -1.01
CHD2-223ENST00000636306 MED12LQ86YW9 2145 aa8.74□□□□□ -1.01
CHD2-223ENST00000636306 VDAC2P45880 294 aaPredicted RBP8.73□□□□□ -1.01
CHD2-223ENST00000636306 CSN1S1P47710 185 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 PSG5Q15238 335 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 C3orf36Q3SXR2 165 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 STPG3Q8N7X2 389 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 IL1F10Q8WWZ1 152 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 SNRNP40Q96DI7 357 aaKnown RBP8.73□□□□□ -1.01
CHD2-223ENST00000636306 SSBP3Q9BWW4 388 aaPredicted RBP8.73□□□□□ -1.01
CHD2-223ENST00000636306 CXXC4Q9H2H0 198 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 PLEKHA3Q9HB20 300 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 INSIG2Q9Y5U4 225 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 OTOGLQ3ZCN5 2332 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 TTC28Q96AY4 2481 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 TRAV24A0A0B4J272 114 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 TM4SF5O14894 197 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 SNAI2O43623 268 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 TIMM8AO60220 97 aaPredicted RBP8.73□□□□□ -1.01
CHD2-223ENST00000636306 CLEC3BP05452 202 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 CAMPP49913 170 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 ERVK11-1P61568 191 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 PRR20EP86478 221 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 PRR20CP86479 221 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 PRR20DP86480 221 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 PRR20BP86481 221 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 PRR20AP86496 221 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 PHLDA1Q8WV24 401 aaPredicted RBP8.73□□□□□ -1.01
CHD2-223ENST00000636306 ZNF355PQ9NSJ1 428 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 DLL3Q9NYJ7 618 aa8.73□□□□□ -1.01
CHD2-223ENST00000636306 HIGD1CA8MV81 97 aa8.72□□□□□ -1.01
CHD2-223ENST00000636306 TNFRSF13BO14836 293 aaPredicted RBP8.72□□□□□ -1.01
CHD2-223ENST00000636306 KLK10O43240 276 aa8.72□□□□□ -1.01
CHD2-223ENST00000636306 IGLV1-44P01699 117 aa8.72□□□□□ -1.01
CHD2-223ENST00000636306 ZNF816Q0VGE8 651 aaPredicted RBP8.72□□□□□ -1.01
CHD2-223ENST00000636306 ZNF146Q15072 292 aa8.72□□□□□ -1.01
CHD2-223ENST00000636306 GAGE13Q4V321 117 aa8.72□□□□□ -1.01
CHD2-223ENST00000636306 MIR17HGQ75NE6 70 aa8.72□□□□□ -1.01
CHD2-223ENST00000636306 CXorf67Q86X51 503 aaPredicted RBP8.72□□□□□ -1.01
CHD2-223ENST00000636306 KLF14Q8TD94 323 aaPredicted RBP8.72□□□□□ -1.01
CHD2-223ENST00000636306 CACNG8Q8WXS5 425 aa8.72□□□□□ -1.01
CHD2-223ENST00000636306 HS3ST6Q96QI5 342 aa8.72□□□□□ -1.01
CHD2-223ENST00000636306 TMUB1Q9BVT8 246 aa8.72□□□□□ -1.01
CHD2-223ENST00000636306 GFRA4Q9GZZ7 299 aa8.72□□□□□ -1.01
CHD2-223ENST00000636306 CDIP1Q9H305 208 aa8.72□□□□□ -1.01
CHD2-223ENST00000636306 DOCK7Q96N67 2140 aa8.72□□□□□ -1.01
CHD2-223ENST00000636306 MUC3AQ02505 3323 aa8.72□□□□□ -1.01
CHD2-223ENST00000636306 GGTLC3B5MD39 225 aa8.71□□□□□ -1.01
CHD2-223ENST00000636306 HSPB6O14558 160 aa8.71□□□□□ -1.01
CHD2-223ENST00000636306 IGHG4P01861 327 aa8.71□□□□□ -1.01
CHD2-223ENST00000636306 GATA3P23771 443 aa8.71□□□□□ -1.01
CHD2-223ENST00000636306 SRSF1Q07955 248 aaKnown RBP eCLIP8.71□□□□□ -1.014e-7■■■□□ 18.4
CHD2-223ENST00000636306 CR1LQ2VPA4 569 aa8.71□□□□□ -1.01
CHD2-223ENST00000636306 MBNL2Q5VZF2 373 aaKnown RBP8.71□□□□□ -1.01
CHD2-223ENST00000636306 ANAPC13Q9BS18 74 aa8.71□□□□□ -1.01
CHD2-223ENST00000636306 ZNF71Q9NQZ8 489 aaPredicted RBP8.71□□□□□ -1.01
CHD2-223ENST00000636306 SELENOKQ9Y6D0 94 aa8.71□□□□□ -1.01
CHD2-223ENST00000636306 CACNA1GO43497 2377 aa8.71□□□□□ -1.01
CHD2-223ENST00000636306 A8MWL6 223 aa8.71□□□□□ -1.02
CHD2-223ENST00000636306 CECR9P0C854 216 aa8.71□□□□□ -1.02
CHD2-223ENST00000636306 ARL3P36405 182 aa8.71□□□□□ -1.02
CHD2-223ENST00000636306 RPL30P62888 115 aaKnown RBP8.71□□□□□ -1.02
CHD2-223ENST00000636306 ETDBQ3ZM63 59 aa8.71□□□□□ -1.02
CHD2-223ENST00000636306 Q6P435 159 aa8.71□□□□□ -1.02
CHD2-223ENST00000636306 ZNF497Q6ZNH5 498 aa8.71□□□□□ -1.02
CHD2-223ENST00000636306 Q6ZR03 302 aa8.71□□□□□ -1.02
CHD2-223ENST00000636306 OR9G1Q8NH87 305 aa8.71□□□□□ -1.02
CHD2-223ENST00000636306 SSMEM1Q8WWF3 244 aa8.71□□□□□ -1.02
CHD2-223ENST00000636306 C1orf159Q96HA4 380 aa8.71□□□□□ -1.02
CHD2-223ENST00000636306 GCM1Q9NP62 436 aa8.71□□□□□ -1.02
CHD2-223ENST00000636306 MBNL3Q9NUK0 354 aaKnown RBP8.71□□□□□ -1.02
CHD2-223ENST00000636306 PRO0461Q9UI25 63 aa8.71□□□□□ -1.02
CHD2-223ENST00000636306 TMEM30CPA0ZSE6 113 aa8.7□□□□□ -1.02
CHD2-223ENST00000636306 C17orf98A8MV24 154 aa8.7□□□□□ -1.02
CHD2-223ENST00000636306 IGLL5B9A064 214 aa8.7□□□□□ -1.02
CHD2-223ENST00000636306 MGST3O14880 152 aa8.7□□□□□ -1.02
CHD2-223ENST00000636306 OR2H2O95918 312 aa8.7□□□□□ -1.02
CHD2-223ENST00000636306 ATP5G2Q06055 141 aa8.7□□□□□ -1.02
CHD2-223ENST00000636306 TRAT1Q6PIZ9 186 aa8.7□□□□□ -1.02
CHD2-223ENST00000636306 RPRMLQ8N4K4 120 aa8.7□□□□□ -1.02
CHD2-223ENST00000636306 OR10X1Q8NGY0 326 aa8.7□□□□□ -1.02
CHD2-223ENST00000636306 HARBI1Q96MB7 349 aa8.7□□□□□ -1.02
CHD2-223ENST00000636306 ZNF488Q96MN9 340 aa8.7□□□□□ -1.02
CHD2-223ENST00000636306 TM2D2Q9BX73 214 aa8.7□□□□□ -1.02
CHD2-223ENST00000636306 MRPL32Q9BYC8 188 aaKnown RBP8.7□□□□□ -1.02
CHD2-223ENST00000636306 TMEM133Q9H2Q1 129 aa8.7□□□□□ -1.02
CHD2-223ENST00000636306 C7orf69Q9H7B7 122 aa8.7□□□□□ -1.02
CHD2-223ENST00000636306 ZNF492Q9P255 531 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms