RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 WI2-2373I1.2A0A1W2PRP0 233 aa7.39□□□□□ -1.23
CACNA1A-223ENST00000636058 PPP5D1E7EU14 171 aa7.39□□□□□ -1.23
CACNA1A-223ENST00000636058 OR2C1O95371 312 aa7.39□□□□□ -1.23
CACNA1A-223ENST00000636058 LGALS1P09382 135 aaKnown RBP7.39□□□□□ -1.23
CACNA1A-223ENST00000636058 CD28P10747 220 aa7.39□□□□□ -1.23
CACNA1A-223ENST00000636058 M6PRP20645 277 aa7.39□□□□□ -1.23
CACNA1A-223ENST00000636058 FHITP49789 147 aa7.39□□□□□ -1.23
CACNA1A-223ENST00000636058 PLP1P60201 277 aa7.39□□□□□ -1.23
CACNA1A-223ENST00000636058 RAB2AP61019 212 aa7.39□□□□□ -1.23
CACNA1A-223ENST00000636058 ACOT6Q3I5F7 207 aaPredicted RBP7.39□□□□□ -1.23
CACNA1A-223ENST00000636058 GCSAMLQ5JQS6 135 aa7.39□□□□□ -1.23
CACNA1A-223ENST00000636058 PXDC1Q5TGL8 231 aa7.39□□□□□ -1.23
CACNA1A-223ENST00000636058 DPPA3Q6W0C5 159 aa7.39□□□□□ -1.23
CACNA1A-223ENST00000636058 ZNF600Q6ZNG1 722 aa7.39□□□□□ -1.23
CACNA1A-223ENST00000636058 Q6ZRG5 221 aa7.39□□□□□ -1.23
CACNA1A-223ENST00000636058 OR51G1Q8NGK1 321 aa7.39□□□□□ -1.23
CACNA1A-223ENST00000636058 LRRC20Q8TCA0 184 aa7.39□□□□□ -1.23
CACNA1A-223ENST00000636058 Q8WTZ3 238 aa7.39□□□□□ -1.23
CACNA1A-223ENST00000636058 WFDC12Q8WWY7 111 aa7.39□□□□□ -1.23
CACNA1A-223ENST00000636058 OR5B12Q96R08 314 aa7.39□□□□□ -1.23
CACNA1A-223ENST00000636058 PEF1Q9UBV8 284 aaKnown RBP7.39□□□□□ -1.23
CACNA1A-223ENST00000636058 TEP1Q99973 2627 aaKnown RBP7.38□□□□□ -1.23
CACNA1A-223ENST00000636058 C2CD3Q4AC94 2353 aa7.38□□□□□ -1.23
CACNA1A-223ENST00000636058 ANKRD34BA5PLL1 514 aa7.38□□□□□ -1.23
CACNA1A-223ENST00000636058 I3L521 148 aa7.38□□□□□ -1.23
CACNA1A-223ENST00000636058 HAX1O00165 279 aa7.38□□□□□ -1.23
CACNA1A-223ENST00000636058 BMPR1BO00238 502 aa7.38□□□□□ -1.23
CACNA1A-223ENST00000636058 RELQ04864 619 aaPredicted RBP7.38□□□□□ -1.23
CACNA1A-223ENST00000636058 FOXL1Q12952 345 aa7.38□□□□□ -1.23
CACNA1A-223ENST00000636058 PATE2Q6UY27 113 aa7.38□□□□□ -1.23
CACNA1A-223ENST00000636058 RPP25LQ8N5L8 163 aaKnown RBP7.38□□□□□ -1.23
CACNA1A-223ENST00000636058 OR10G4Q8NGN3 311 aa7.38□□□□□ -1.23
CACNA1A-223ENST00000636058 OR10G9Q8NGN4 311 aa7.38□□□□□ -1.23
CACNA1A-223ENST00000636058 OR10G7Q8NGN6 311 aa7.38□□□□□ -1.23
CACNA1A-223ENST00000636058 GATAD1Q8WUU5 269 aa7.38□□□□□ -1.23
CACNA1A-223ENST00000636058 C4orf3Q8WVX3 66 aa7.38□□□□□ -1.23
CACNA1A-223ENST00000636058 TMEM37Q8WXS4 190 aa7.38□□□□□ -1.23
CACNA1A-223ENST00000636058 RNF125Q96EQ8 232 aa7.38□□□□□ -1.23
CACNA1A-223ENST00000636058 C19orf24Q9BVV8 132 aa7.38□□□□□ -1.23
CACNA1A-223ENST00000636058 ZFAND3Q9H8U3 227 aa7.38□□□□□ -1.23
CACNA1A-223ENST00000636058 PUS1Q9Y606 427 aaKnown RBP eCLIP7.38□□□□□ -1.23
CACNA1A-223ENST00000636058 ELOA3CA0A087WX78 387 aaPredicted RBP7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 IGHV3-35A0A0C4DH35 117 aa7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 ZNF705EA8MWA4 302 aaPredicted RBP7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 SEC14L6B5MCN3 397 aa7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 GGCTO75223 188 aaKnown RBP7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 IL4P05112 153 aa7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 NMBP08949 121 aa7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 OR5G3P0C626 314 aa7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 ORM2P19652 201 aa7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 RAB14P61106 215 aa7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 LYZP61626 148 aa7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 USF2Q15853 346 aaPredicted RBP7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 ZNF726P1Q15940 193 aa7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 CLLU1Q5K131 121 aa7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 TOMM20LQ6UXN7 152 aa7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 C18orf65Q6ZTR6 163 aa7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 PRIMA1Q86XR5 153 aa7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 SLC7A5P1Q8MH63 180 aa7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 OR1L4Q8NGR5 311 aa7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 OR1B1Q8NGR6 318 aa7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 FAM213BQ8TBF2 198 aa7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 SAT2Q96F10 170 aaPredicted RBP7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 RCC1LQ96I51 464 aaKnown RBP7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 PFDN5Q99471 154 aa7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 CITED2Q99967 270 aaPredicted RBP7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 SEPSECSQ9HD40 501 aaKnown RBP7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 DNAJC4Q9NNZ3 241 aa7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 MRPL27Q9P0M9 148 aaKnown RBP7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 DOK5Q9P104 306 aa7.37□□□□□ -1.23
CACNA1A-223ENST00000636058 IGHV4OR15-8A0A075B7B6 117 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 A0A087WW49 117 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 CTXND1A0A1B0GTU2 59 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 NDUFA4O00483 81 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 COX7A2P2O60397 106 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 HYPMO75409 117 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 HSPB1P04792 205 aaKnown RBP7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 CDC34P49427 236 aaPredicted RBP7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 KRTAP10-3P60369 221 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 RHOBP62745 196 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 BLOC1S1P78537 153 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 KRTAP24-1Q3LI83 254 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 KHDC1LQ5JSQ8 128 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 FAM78BQ5VT40 261 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 C10orf113Q5VZT2 155 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 HIST2H2BDQ6DRA6 164 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 FAM122CQ6P4D5 195 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 SSX7Q7RTT5 188 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 C11orf44Q8N8P7 122 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 KLHL30-AS1Q8NEE0 82 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 LYPD6BQ8NI32 183 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 PCNPQ8WW12 178 aaKnown RBP7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 MBD3L1Q8WWY6 194 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 RAB24Q969Q5 203 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 UHRF2Q96PU4 802 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 RNF2Q99496 336 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 PBDC1Q9BVG4 233 aa7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 MRPL32Q9BYC8 188 aaKnown RBP7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 ACTR3CQ9C0K3 210 aaPredicted RBP7.36□□□□□ -1.23
CACNA1A-223ENST00000636058 SLC25A22Q9H936 323 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms