RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 CD70P32970 193 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 HINT1P49773 126 aaPredicted RBP2.11□□□□□ -2.07
CNOT1-223ENST00000628857 KLK7P49862 253 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 NDUFA8P51970 172 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 FOXA3P55318 350 aaPredicted RBP2.11□□□□□ -2.07
CNOT1-223ENST00000628857 GABARAPL2P60520 117 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 ZNF90Q03938 601 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 Q0VG73 95 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 DIAPH2-AS1Q14236 149 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 ELOCQ15369 112 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 RRN3P1Q2M238 152 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 TDRG1Q3Y452 100 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 ABCA11PQ4W5N1 156 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 KLF17Q5JT82 389 aaPredicted RBP2.11□□□□□ -2.07
CNOT1-223ENST00000628857 SLC25A34Q6PIV7 304 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 Q6ZS49 121 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 SHISA6Q6ZSJ9 500 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 CLEC20AQ6ZU45 233 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 AAED1Q7RTV5 226 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 VN1R4Q7Z5H5 301 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 KTN1-AS1Q86SY8 53 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 SLC22A24Q8N4F4 322 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 C3orf22Q8N5N4 141 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 OR4X2Q8NGF9 303 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 OR51H1Q8NH63 302 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 OR4A5Q8NH83 315 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 ATP6V0E2Q8NHE4 81 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 C2orf15Q8WU43 125 aaKnown RBP2.11□□□□□ -2.07
CNOT1-223ENST00000628857 CCL17Q92583 94 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 ELSPBP1Q96BH3 223 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 FXYD5Q96DB9 178 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 DPH3Q96FX2 82 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 PGLYRP4Q96LB8 373 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 AQP10Q96PS8 301 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 C11orf68Q9H3H3 251 aaKnown RBP2.11□□□□□ -2.07
CNOT1-223ENST00000628857 OTORQ9NRC9 128 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 RNF11Q9Y3C5 154 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 LINC00312Q9Y6C7 94 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 CHCHD2Q9Y6H1 151 aaPredicted RBP2.11□□□□□ -2.07
CNOT1-223ENST00000628857 PXDNLA1KZ92 1463 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 ATP10BO94823 1461 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 NKTRP30414 1462 aaKnown RBP2.11□□□□□ -2.07
CNOT1-223ENST00000628857 IQSEC2Q5JU85 1478 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 NLRC5Q86WI3 1866 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 MYO10Q9HD67 2058 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 EFCAB5A4FU69 1503 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 ALPK3Q96L96 1907 aa2.11□□□□□ -2.07
CNOT1-223ENST00000628857 IQGAP2Q13576 1575 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 DOCK4Q8N1I0 1966 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 ANKARQ7Z5J8 1434 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 DOCK1Q14185 1865 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 TRAV9-1A0A075B6T8 112 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 IGHV1OR21-1A0A087WYE8 117 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 TRAV13-1A0A0B4J241 112 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 IGHV3OR16-9A0A0B4J2B5 98 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 IGKV1D-13A0A0B4J2D9 117 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 TRBV7-6A0A0J9YX20 115 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 IRGMA1A4Y4 181 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 DPRXA6NFQ7 191 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 TMEM250H0YL14 139 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 APOC4-APOC2K7ER74 178 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 M0R129 80 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 UBE2L6O14933 153 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 AGPAT2O15120 278 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 SLC37A4O43826 429 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 SCRG1O75711 98 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 SERF1AO75920 110 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 APOC2P02655 101 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 MT-ATP8P03928 68 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 IGKV1-13P0DP09 117 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 OPRM1P35372 400 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 VDAC2P45880 294 aaPredicted RBP2.1□□□□□ -2.07
CNOT1-223ENST00000628857 NMUP48645 174 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 RPS11P62280 158 aaKnown RBP eCLIP2.1□□□□□ -2.07
CNOT1-223ENST00000628857 SEC11AP67812 179 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 Q56UQ5 140 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 UBE2NLQ5JXB2 153 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 C22orf39Q6P5X5 142 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 ZNF880Q6PDB4 577 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 LINC00305Q7Z4B0 112 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 MSRB3Q8IXL7 192 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 C1orf174Q8IYL3 243 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 ATOH7Q8N100 152 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 C10orf111Q8N326 155 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 OR1J4Q8NGS1 313 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 OTOSQ8NHW6 89 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 LINC01006Q8NI28 216 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 SCGB1C1Q8TD33 95 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 FAM3DQ96BQ1 224 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 GNPNAT1Q96EK6 184 aaPredicted RBP2.1□□□□□ -2.07
CNOT1-223ENST00000628857 LINC00526Q96FQ7 95 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 C18orf15Q96N68 181 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 MCEEQ96PE7 176 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 OR2A5Q96R48 311 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 DEFB127Q9H1M4 99 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 ZNF702PQ9H963 129 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 TAAR3PQ9P1P4 343 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 CKLFQ9UBR5 152 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 LINC00527Q9UJ94 153 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 HES2Q9Y543 173 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms