RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 LRRC29Q8WV35 223 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 TMEM147Q9BVK8 224 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 OR2D2Q9H210 308 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 SDF2L1Q9HCN8 221 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 TMEM106BQ9NUM4 274 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 RNF7Q9UBF6 113 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 C17orf112F2Z3M2 114 aa9.34□□□□□ -0.91
LINC00538-201ENST00000626109 F5H697 171 aa9.34□□□□□ -0.91
LINC00538-201ENST00000626109 F6UZH7 168 aa9.34□□□□□ -0.91
LINC00538-201ENST00000626109 FOXH1O75593 365 aa9.34□□□□□ -0.91
LINC00538-201ENST00000626109 RND2P52198 227 aa9.34□□□□□ -0.91
LINC00538-201ENST00000626109 DEFB113Q30KQ7 82 aa9.34□□□□□ -0.91
LINC00538-201ENST00000626109 KIR3DL3Q8N743 410 aa9.34□□□□□ -0.91
LINC00538-201ENST00000626109 ZNF709Q8N972 641 aa9.34□□□□□ -0.91
LINC00538-201ENST00000626109 MRAP2Q96G30 205 aa9.34□□□□□ -0.91
LINC00538-201ENST00000626109 PRR25Q96S07 402 aa9.34□□□□□ -0.91
LINC00538-201ENST00000626109 AGMATQ9BSE5 352 aa9.34□□□□□ -0.91
LINC00538-201ENST00000626109 UBE2L5PA0A1B0GUS4 154 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 LYNX1G3V0Z9 82 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 KRASP01116 189 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 HBZP02008 142 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 LYNX1P0DP58 116 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 COL8A2P25067 703 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 ERVFRD-1P60508 538 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 ZNF726P1Q15940 193 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 CD300EQ496F6 205 aaPredicted RBP9.33□□□□□ -0.92
LINC00538-201ENST00000626109 OR1L1Q8NH94 360 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 MBD6Q96DN6 1003 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 BTF3L4Q96K17 158 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 HSD17B10Q99714 261 aaKnown RBP9.33□□□□□ -0.92
LINC00538-201ENST00000626109 FNDC4Q9H6D8 234 aaPredicted RBP9.33□□□□□ -0.92
LINC00538-201ENST00000626109 VSIRQ9H7M9 311 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 MANBALQ9NQG1 85 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 DOK5Q9P104 306 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 NAT8Q9UHE5 227 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 PRO0628Q9UI54 55 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 CTXND1A0A1B0GTU2 59 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 C12orf77C9JDV5 145 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 TMEM250H0YL14 139 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 TMEM178BH3BS89 294 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 SPINT2O43291 252 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 NUDT3O95989 172 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 CXCL1P09341 107 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 G6PCP35575 357 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 EDDM3AQ14507 147 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 TMEM241Q24JQ0 296 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 ZNF343Q6P1L6 599 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 ACP7Q6ZNF0 438 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 TGIF2LYQ8IUE0 185 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 UBALD1Q8TB05 177 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 MS4A6AQ9H2W1 248 aa9.33□□□□□ -0.92
LINC00538-201ENST00000626109 SRRM5B3KS81 715 aa9.32□□□□□ -0.92
LINC00538-201ENST00000626109 GABRA2P47869 451 aa9.32□□□□□ -0.92
LINC00538-201ENST00000626109 DLX6P56179 175 aa9.32□□□□□ -0.92
LINC00538-201ENST00000626109 MEF2BQ02080 365 aaPredicted RBP9.32□□□□□ -0.92
LINC00538-201ENST00000626109 ZNF816Q0VGE8 651 aaPredicted RBP9.32□□□□□ -0.92
LINC00538-201ENST00000626109 HLA-DRB5Q30154 266 aa9.32□□□□□ -0.92
LINC00538-201ENST00000626109 KLHDC1Q8N7A1 406 aa9.32□□□□□ -0.92
LINC00538-201ENST00000626109 OR13C6PQ8NH95 151 aa9.32□□□□□ -0.92
LINC00538-201ENST00000626109 RPUSD4Q96CM3 377 aaKnown RBP9.32□□□□□ -0.92
LINC00538-201ENST00000626109 MDFIQ99750 246 aa9.32□□□□□ -0.92
LINC00538-201ENST00000626109 CACNA1DQ01668 2161 aa9.32□□□□□ -0.92
LINC00538-201ENST00000626109 TRBV24-1A0A075B6N3 115 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 ODAMA1E959 279 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 M0R143 59 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 LHBP01229 141 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 P0C879 139 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 FGF7P21781 194 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 RPS20P60866 119 aaKnown RBP9.31□□□□□ -0.92
LINC00538-201ENST00000626109 RHOBP62745 196 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 GNB2P62879 340 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 EIF4EBP1Q13541 118 aaPredicted RBP9.31□□□□□ -0.92
LINC00538-201ENST00000626109 PRSS8Q16651 343 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 CR1LQ2VPA4 569 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 OR10G7Q8NGN6 311 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 WNT9BO14905 357 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 HIST1H2BKO60814 126 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 YIF1AO95070 293 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 TRGC2P03986 189 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 HIST1H2BJP06899 126 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 HIST1H2BOP23527 126 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 HIST1H2BBP33778 126 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 HIST1H2BDP58876 126 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 HIST1H2BCP62807 126 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 HIST2H2BEQ16778 126 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.31□□□□□ -0.92
LINC00538-201ENST00000626109 CYP2G1PQ6ZSU1 146 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 RPP25LQ8N5L8 163 aaKnown RBP9.31□□□□□ -0.92
LINC00538-201ENST00000626109 HIST1H2BHQ93079 126 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 HIST1H2BNQ99877 126 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 HIST1H2BMQ99879 126 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 SMIM7Q9BQ49 75 aa9.31□□□□□ -0.92
LINC00538-201ENST00000626109 TANC2Q9HCD6 1990 aa9.3□□□□□ -0.92
LINC00538-201ENST00000626109 HECTD1Q9ULT8 2610 aa9.3□□□□□ -0.92
LINC00538-201ENST00000626109 YLPM1P49750 1951 aaKnown RBP9.3□□□□□ -0.92
LINC00538-201ENST00000626109 DCHS2Q6V1P9 2916 aa9.3□□□□□ -0.92
LINC00538-201ENST00000626109 TRAV38-1A0A0B4J264 116 aa9.3□□□□□ -0.92
LINC00538-201ENST00000626109 KBTBD11O94819 623 aa9.3□□□□□ -0.92
LINC00538-201ENST00000626109 GPR6P46095 362 aaPredicted RBP9.3□□□□□ -0.92
LINC00538-201ENST00000626109 DSCR9P59020 149 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms