RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 AKIRIN2Q53H80 203 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 EXOC3-AS1Q8N2X6 119 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 GNPDA2Q8TDQ7 276 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 ZNF418Q8TF45 676 aaPredicted RBP0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 SFT2D1Q8WV19 159 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 SLAMF6Q96DU3 332 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 ODF3Q96PU9 254 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 HIST1H2BLQ99880 126 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 TMEM126AQ9H061 195 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 ENY2Q9NPA8 101 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 OPTCQ9UBM4 332 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 SNURFQ9Y675 71 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 NCOA1Q15788 1441 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 ADGRL3Q9HAR2 1447 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 MED1Q15648 1581 aaPredicted RBP0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 OBSL1O75147 1896 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 SBF1O95248 1867 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 RTL1A6NKG5 1358 aa0.69□□□□□ -2.3
SCARNA4-202ENST00000625402 DENND4CQ5VZ89 1909 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 LOC110117498A0A087WWA1 95 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 TRBV6-8A0A0A6YYG3 113 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 M0R378 163 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 SULT1B1O43704 296 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 RHOBP62745 196 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 EIF5AP63241 154 aaKnown RBP0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 MRPS25P82663 173 aaKnown RBP0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 MRPS15P82914 257 aaKnown RBP0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 RHOGP84095 191 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 ESRGQ1W209 222 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 RRN3P1Q2M238 152 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 GOLT1AQ6ZVE7 132 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 OR4C6Q8NH72 309 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 CHMP6Q96FZ7 201 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 BTF3L4Q96K17 158 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 OBSCN-AS1Q96MR7 158 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 PRADC1Q9BSG0 188 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 BCL2L10Q9HD36 194 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 ACER3Q9NUN7 267 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 ARMC1Q9NVT9 282 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 HS3ST2Q9Y278 367 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 SLC35A3Q9Y2D2 325 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 ZFP30Q9Y2G7 519 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 ARL2BPQ9Y2Y0 163 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 C22orf24Q9Y442 160 aa0.68□□□□□ -2.3
SCARNA4-202ENST00000625402 CHD3Q12873 2000 aaKnown RBP0.67□□□□□ -2.3
SCARNA4-202ENST00000625402 ARHGEF28Q8N1W1 1705 aaKnown RBP0.67□□□□□ -2.3
SCARNA4-202ENST00000625402 EML5Q05BV3 1969 aa0.67□□□□□ -2.3
SCARNA4-202ENST00000625402 TRBV19A0A075B6N1 114 aa0.67□□□□□ -2.3
SCARNA4-202ENST00000625402 C7orf71A4D174 169 aa0.67□□□□□ -2.3
SCARNA4-202ENST00000625402 B4DSR2 109 aa0.67□□□□□ -2.3
SCARNA4-202ENST00000625402 GEMIN2O14893 280 aaKnown RBP0.67□□□□□ -2.3
SCARNA4-202ENST00000625402 GADD45GO95257 159 aa0.67□□□□□ -2.3
SCARNA4-202ENST00000625402 HSPE1P61604 102 aaKnown RBP0.67□□□□□ -2.3
SCARNA4-202ENST00000625402 C1orf137Q5JT78 98 aa0.67□□□□□ -2.3
SCARNA4-202ENST00000625402 HACD4Q5VWC8 232 aa0.67□□□□□ -2.3
SCARNA4-202ENST00000625402 PDZD9Q8IXQ8 264 aa0.67□□□□□ -2.3
SCARNA4-202ENST00000625402 CLECL1Q8IZS7 167 aa0.67□□□□□ -2.3
SCARNA4-202ENST00000625402 FAM172AQ8WUF8 416 aa0.67□□□□□ -2.3
SCARNA4-202ENST00000625402 KIAA1549Q9HCM3 1950 aa0.66□□□□□ -2.3
SCARNA4-202ENST00000625402 CASP8AP2Q9UKL3 1982 aa0.66□□□□□ -2.3
SCARNA4-202ENST00000625402 A0A087WX48 190 aa0.66□□□□□ -2.3
SCARNA4-202ENST00000625402 HMGB3O15347 200 aaKnown RBP0.66□□□□□ -2.3
SCARNA4-202ENST00000625402 HYPMO75409 117 aa0.66□□□□□ -2.3
SCARNA4-202ENST00000625402 SRP14P37108 136 aaKnown RBP0.66□□□□□ -2.3
SCARNA4-202ENST00000625402 LYRM7Q5U5X0 104 aa0.66□□□□□ -2.3
SCARNA4-202ENST00000625402 DHRS4L2Q6PKH6 230 aa0.66□□□□□ -2.3
SCARNA4-202ENST00000625402 SOSTDC1Q6X4U4 206 aa0.66□□□□□ -2.3
SCARNA4-202ENST00000625402 PHB2Q99623 299 aa0.66□□□□□ -2.3
SCARNA4-202ENST00000625402 NHP2Q9NX24 153 aaKnown RBP0.66□□□□□ -2.3
SCARNA4-202ENST00000625402 MED29Q9NX70 200 aa0.66□□□□□ -2.3
SCARNA4-202ENST00000625402 KLK9Q9UKQ9 250 aa0.66□□□□□ -2.3
SCARNA4-202ENST00000625402 CHCHD2Q9Y6H1 151 aaPredicted RBP0.66□□□□□ -2.3
SCARNA4-202ENST00000625402 MYO18AQ92614 2054 aaKnown RBP0.66□□□□□ -2.3
SCARNA4-202ENST00000625402 KIF1BO60333 1816 aa0.66□□□□□ -2.3
SCARNA4-202ENST00000625402 RIMBP3CA6NJZ7 1639 aa0.65□□□□□ -2.31
SCARNA4-202ENST00000625402 RIMBP3BA6NNM3 1639 aa0.65□□□□□ -2.31
SCARNA4-202ENST00000625402 RIMBP3Q9UFD9 1639 aa0.65□□□□□ -2.31
SCARNA4-202ENST00000625402 IGKV2D-26A0A0A0MRZ7 120 aa0.65□□□□□ -2.31
SCARNA4-202ENST00000625402 TRBV6-7A0A0A0MS04 114 aa0.65□□□□□ -2.31
SCARNA4-202ENST00000625402 J3QRK9 145 aa0.65□□□□□ -2.31
SCARNA4-202ENST00000625402 M0R2N4 97 aa0.65□□□□□ -2.31
SCARNA4-202ENST00000625402 TAX1BP3O14907 124 aa0.65□□□□□ -2.31
SCARNA4-202ENST00000625402 IL9P15248 144 aa0.65□□□□□ -2.31
SCARNA4-202ENST00000625402 KRR1Q13601 381 aaKnown RBP0.65□□□□□ -2.31
SCARNA4-202ENST00000625402 TEX261Q6UWH6 196 aa0.65□□□□□ -2.31
SCARNA4-202ENST00000625402 Q8N814 137 aa0.65□□□□□ -2.31
SCARNA4-202ENST00000625402 SLC30A7Q8NEW0 376 aa0.65□□□□□ -2.31
SCARNA4-202ENST00000625402 OR2T10Q8NGZ9 312 aa0.65□□□□□ -2.31
SCARNA4-202ENST00000625402 CDC26Q8NHZ8 85 aa0.65□□□□□ -2.31
SCARNA4-202ENST00000625402 PRNDQ9UKY0 176 aa0.65□□□□□ -2.31
SCARNA4-202ENST00000625402 U3KQ87 197 aa0.65□□□□□ -2.31
SCARNA4-202ENST00000625402 FREM3P0C091 2139 aa0.65□□□□□ -2.31
SCARNA4-202ENST00000625402 ASCC3Q8N3C0 2202 aaKnown RBP0.65□□□□□ -2.31
SCARNA4-202ENST00000625402 MCM3APO60318 1980 aa0.65□□□□□ -2.31
SCARNA4-202ENST00000625402 FMN1Q68DA7 1419 aa0.64□□□□□ -2.31
SCARNA4-202ENST00000625402 TAF1LQ8IZX4 1826 aa0.64□□□□□ -2.31
SCARNA4-202ENST00000625402 CCDC160A6NGH7 325 aa0.64□□□□□ -2.31
SCARNA4-202ENST00000625402 ZNF736B4DX44 427 aaPredicted RBP0.64□□□□□ -2.31
SCARNA4-202ENST00000625402 CST8O60676 142 aa0.64□□□□□ -2.31
SCARNA4-202ENST00000625402 TIMM17BO60830 172 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms