RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 SPINK14Q6IE38 97 aa6.11□□□□□ -1.43
TRIM49B-202ENST00000622138 LINC00596Q86U02 117 aa6.11□□□□□ -1.43
TRIM49B-202ENST00000622138 TUSC5Q8IXB3 177 aa6.11□□□□□ -1.43
TRIM49B-202ENST00000622138 PIFOQ8TCI5 191 aa6.11□□□□□ -1.43
TRIM49B-202ENST00000622138 MGST2Q99735 147 aa6.11□□□□□ -1.43
TRIM49B-202ENST00000622138 ZNF747Q9BV97 191 aa6.11□□□□□ -1.43
TRIM49B-202ENST00000622138 HEYLQ9NQ87 328 aaPredicted RBP6.11□□□□□ -1.43
TRIM49B-202ENST00000622138 SIT1Q9Y3P8 196 aa6.11□□□□□ -1.43
TRIM49B-202ENST00000622138 AHCTF1Q8WYP5 2266 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 FAM90A9PA6NNJ1 464 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 IGLL5B9A064 214 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 WIPF1O43516 503 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 MRPL33O75394 65 aaKnown RBP6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 SRD5A1P18405 259 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 INSL3P51460 131 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 FXYD2P54710 66 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 ERVK11-1P61568 191 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 CATR1Q13166 79 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 C3AR1Q16581 482 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 PEAR1Q5VY43 1037 aaPredicted RBP6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 MIC13Q5XKP0 118 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 TREML4Q6UXN2 200 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 C18orf15Q96N68 181 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 IGKV3D-15A0A087WSY6 115 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 A0A1B0GWB2 263 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 TMEM8BA6NDV4 472 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 A8MWL6 223 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 NHLRC4P0CG21 123 aaPredicted RBP6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 GCSHP23434 173 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 TMPRSS3P57727 454 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 PSG5Q15238 335 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 EFNB3Q15768 340 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 TMEM105Q8N8V8 129 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 ZBTB34Q8NCN2 500 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 PTH2Q96A98 100 aa6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 SNRNP40Q96DI7 357 aaKnown RBP6.1□□□□□ -1.43
TRIM49B-202ENST00000622138 DNAJC13O75165 2243 aa6.09□□□□□ -1.43
TRIM49B-202ENST00000622138 HIGD1CA8MV81 97 aa6.09□□□□□ -1.43
TRIM49B-202ENST00000622138 FOXH1O75593 365 aa6.09□□□□□ -1.43
TRIM49B-202ENST00000622138 CAMPP49913 170 aa6.09□□□□□ -1.43
TRIM49B-202ENST00000622138 SRSF1Q07955 248 aaKnown RBP eCLIP6.09□□□□□ -1.43
TRIM49B-202ENST00000622138 CT83Q5H943 113 aa6.09□□□□□ -1.43
TRIM49B-202ENST00000622138 MOGAT3Q86VF5 341 aa6.09□□□□□ -1.43
TRIM49B-202ENST00000622138 ZDHHC16Q969W1 377 aa6.09□□□□□ -1.43
TRIM49B-202ENST00000622138 PRELID3AQ96N28 172 aa6.09□□□□□ -1.43
TRIM49B-202ENST00000622138 SSBP3Q9BWW4 388 aaPredicted RBP6.09□□□□□ -1.43
TRIM49B-202ENST00000622138 GCM1Q9NP62 436 aa6.09□□□□□ -1.43
TRIM49B-202ENST00000622138 DLL3Q9NYJ7 618 aa6.09□□□□□ -1.43
TRIM49B-202ENST00000622138 TCRBV4S1A1TA0A5B7 111 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 TMEM262E9PQX1 116 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 RHODO00212 210 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 FCN3O75636 299 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 HLA-DRB4P13762 266 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 ATP5J2P56134 94 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 ATP5IP56385 69 aaPredicted RBP6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 TCTAP57738 103 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 TAL2Q16559 108 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 FAM53AQ6NSI3 398 aaPredicted RBP6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 Q6P435 159 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 Q6Q795 121 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 PIP4P1Q86T03 277 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 WDR86Q86TI4 376 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 MKXQ8IYA7 352 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 BCL6BQ8N143 479 aaPredicted RBP6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 WDR31Q8NA23 367 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 FAM168AQ92567 244 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 MCRIP2Q9BUT9 160 aaKnown RBP6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 TMEM126AQ9H061 195 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 ZNF355PQ9NSJ1 428 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 HLA-DRB4X5D2U9 266 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 DIDO1Q9BTC0 2240 aaKnown RBP6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 IGHV3-64DA0A0J9YX35 117 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 PRSS29PA6NIE9 313 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 MGST3O14880 152 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 CFHR2P36980 270 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 FOXA3P55318 350 aaPredicted RBP6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 HOXA4Q00056 320 aaPredicted RBP6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 PLP2Q04941 152 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 FHL3Q13643 280 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 Q6ZR03 302 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 TMEM178AQ8NBL3 297 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 PPDPFLQ8WWR9 84 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 SLC25A33Q9BSK2 321 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 CHAC1Q9BUX1 264 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 AP5S1Q9NUS5 200 aa6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 LSM4Q9Y4Z0 139 aaKnown RBP6.08□□□□□ -1.44
TRIM49B-202ENST00000622138 TRAV25A0A0B4J276 109 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 SHISA9B4DS77 424 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 GGTLC3B5MD39 225 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 PRSS46E5RG02 174 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 FNDC10F2Z333 226 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 M0QXV9 152 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 NCR2O95944 276 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 MT-CO3P00414 261 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 CA6P23280 308 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 MAGEA5P43359 124 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 NDUFV3P56181 108 aaKnown RBP6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 CEND1Q8N111 149 aa6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 ZNF808Q8N4W9 903 aaPredicted RBP6.07□□□□□ -1.44
TRIM49B-202ENST00000622138 DRAM1Q8N682 238 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms