RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 PDPNQ86YL7 162 aa12.71□□□□□ -0.37
NPHP4-211ENST00000622020 GRAMD2BQ96HH9 432 aa12.71□□□□□ -0.37
NPHP4-211ENST00000622020 BET1LQ9NYM9 111 aa12.71□□□□□ -0.37
NPHP4-211ENST00000622020 hADV38S2A0JD32 116 aa12.71□□□□□ -0.38
NPHP4-211ENST00000622020 ZGRF1Q86YA3 2104 aa12.71□□□□□ -0.38
NPHP4-211ENST00000622020 IGKV1D-37A0A075B6S9 117 aa12.7□□□□□ -0.38
NPHP4-211ENST00000622020 NKX6-3A6NJ46 265 aa12.7□□□□□ -0.38
NPHP4-211ENST00000622020 SSX8Q7RTT4 187 aa12.7□□□□□ -0.38
NPHP4-211ENST00000622020 LRBAP50851 2863 aa12.7□□□□□ -0.38
NPHP4-211ENST00000622020 CA7P43166 264 aa12.7□□□□□ -0.38
NPHP4-211ENST00000622020 TCTAP57738 103 aa12.7□□□□□ -0.38
NPHP4-211ENST00000622020 COX19Q49B96 90 aa12.7□□□□□ -0.38
NPHP4-211ENST00000622020 MBD6Q96DN6 1003 aa12.7□□□□□ -0.38
NPHP4-211ENST00000622020 URB1-AS1Q96HZ7 61 aa12.7□□□□□ -0.38
NPHP4-211ENST00000622020 MRPL32Q9BYC8 188 aaKnown RBP12.7□□□□□ -0.38
NPHP4-211ENST00000622020 RAB9BQ9NP90 201 aa12.7□□□□□ -0.38
NPHP4-211ENST00000622020 SSUH2Q9Y2M2 353 aa12.7□□□□□ -0.38
NPHP4-211ENST00000622020 SELENOKQ9Y6D0 94 aa12.7□□□□□ -0.38
NPHP4-211ENST00000622020 FNDC10F2Z333 226 aa12.7□□□□□ -0.38
NPHP4-211ENST00000622020 SAPCD1Q5SSQ6 148 aa12.7□□□□□ -0.38
NPHP4-211ENST00000622020 C19orf24Q9BVV8 132 aa12.7□□□□□ -0.38
NPHP4-211ENST00000622020 AKAP13Q12802 2813 aa12.69□□□□□ -0.38
NPHP4-211ENST00000622020 APC2O95996 2303 aa12.69□□□□□ -0.38
NPHP4-211ENST00000622020 NBASA2RRP1 2371 aa12.69□□□□□ -0.38
NPHP4-211ENST00000622020 LOC105371242A0A075B767 164 aa12.69□□□□□ -0.38
NPHP4-211ENST00000622020 TRAV9-2A0A087WT02 112 aa12.69□□□□□ -0.38
NPHP4-211ENST00000622020 TCRBV4S1A1TA0A5B7 111 aa12.69□□□□□ -0.38
NPHP4-211ENST00000622020 C2orf70A6NJV1 201 aa12.69□□□□□ -0.38
NPHP4-211ENST00000622020 ITGB1BP1O14713 200 aa12.69□□□□□ -0.38
NPHP4-211ENST00000622020 FCN3O75636 299 aa12.69□□□□□ -0.38
NPHP4-211ENST00000622020 HIST1H1EP10412 219 aaKnown RBP12.69□□□□□ -0.38
NPHP4-211ENST00000622020 TIMM23BQ5SRD1 257 aa12.69□□□□□ -0.38
NPHP4-211ENST00000622020 TMEM200BQ69YZ2 307 aa12.69□□□□□ -0.38
NPHP4-211ENST00000622020 LYPD2Q6UXB3 125 aa12.69□□□□□ -0.38
NPHP4-211ENST00000622020 DEFB124Q8NES8 71 aa12.69□□□□□ -0.38
NPHP4-211ENST00000622020 EPDR1Q9UM22 224 aa12.69□□□□□ -0.38
NPHP4-211ENST00000622020 C22orf46C9J442 243 aa12.69□□□□□ -0.38
NPHP4-211ENST00000622020 BPIFB3P59826 476 aa12.69□□□□□ -0.38
NPHP4-211ENST00000622020 TMEM177Q53S58 311 aa12.69□□□□□ -0.38
NPHP4-211ENST00000622020 OR4C46A6NHA9 309 aa12.68□□□□□ -0.38
NPHP4-211ENST00000622020 SNAI2O43623 268 aa12.68□□□□□ -0.38
NPHP4-211ENST00000622020 CNTFRP26992 372 aa12.68□□□□□ -0.38
NPHP4-211ENST00000622020 S100A7P31151 101 aa12.68□□□□□ -0.38
NPHP4-211ENST00000622020 WFDC8Q8IUA0 241 aa12.68□□□□□ -0.38
NPHP4-211ENST00000622020 PNKDQ8N490 385 aa12.68□□□□□ -0.38
NPHP4-211ENST00000622020 OSR1Q8TAX0 266 aaPredicted RBP12.68□□□□□ -0.38
NPHP4-211ENST00000622020 GTSF1Q8WW33 167 aa12.68□□□□□ -0.38
NPHP4-211ENST00000622020 FAM215AQ9Y5M1 114 aa12.68□□□□□ -0.38
NPHP4-211ENST00000622020 A0A1W2PPI3 338 aa12.68□□□□□ -0.38
NPHP4-211ENST00000622020 NBEAP1P0C6P0 100 aa12.68□□□□□ -0.38
NPHP4-211ENST00000622020 MPV17L2Q567V2 206 aa12.68□□□□□ -0.38
NPHP4-211ENST00000622020 FAM222BQ8WU58 562 aa12.68□□□□□ -0.38
NPHP4-211ENST00000622020 CACNG8Q8WXS5 425 aa12.68□□□□□ -0.38
NPHP4-211ENST00000622020 ZNF714Q96N38 554 aa12.68□□□□□ -0.38
NPHP4-211ENST00000622020 TPPP3Q9BW30 176 aa12.68□□□□□ -0.38
NPHP4-211ENST00000622020 MRPL27Q9P0M9 148 aaKnown RBP12.68□□□□□ -0.38
NPHP4-211ENST00000622020 ANKRD11Q6UB99 2663 aaPredicted RBP12.68□□□□□ -0.38
NPHP4-211ENST00000622020 MED13LQ71F56 2210 aa12.68□□□□□ -0.38
NPHP4-211ENST00000622020 IGLV3-9A0A075B6K5 115 aa12.67□□□□□ -0.38
NPHP4-211ENST00000622020 TNFSF4P23510 183 aa12.67□□□□□ -0.38
NPHP4-211ENST00000622020 UBE2V1Q13404 147 aa12.67□□□□□ -0.38
NPHP4-211ENST00000622020 PLA2G2CQ5R387 149 aa12.67□□□□□ -0.38
NPHP4-211ENST00000622020 CIARTQ8N365 385 aaPredicted RBP12.67□□□□□ -0.38
NPHP4-211ENST00000622020 OR8B3Q8NGG8 313 aa12.67□□□□□ -0.38
NPHP4-211ENST00000622020 OR1L4Q8NGR5 311 aa12.67□□□□□ -0.38
NPHP4-211ENST00000622020 ORAOV1Q8WV07 137 aa12.67□□□□□ -0.38
NPHP4-211ENST00000622020 GAL3ST2Q9H3Q3 398 aa12.67□□□□□ -0.38
NPHP4-211ENST00000622020 ABCA4P78363 2273 aa12.67□□□□□ -0.38
NPHP4-211ENST00000622020 A0A1W2PRD5 423 aa12.67□□□□□ -0.38
NPHP4-211ENST00000622020 A0A1W2PRF3 423 aa12.67□□□□□ -0.38
NPHP4-211ENST00000622020 A0A1W2PRM7 423 aa12.67□□□□□ -0.38
NPHP4-211ENST00000622020 ZNF833PQ6ZTB9 187 aa12.67□□□□□ -0.38
NPHP4-211ENST00000622020 OR4C13Q8NGP0 309 aa12.67□□□□□ -0.38
NPHP4-211ENST00000622020 ZNF596Q8TC21 504 aa12.67□□□□□ -0.38
NPHP4-211ENST00000622020 MALRD1Q5VYJ5 2156 aa12.67□□□□□ -0.38
NPHP4-211ENST00000622020 P01737 135 aa12.67□□□□□ -0.38
NPHP4-211ENST00000622020 ZC2HC1AQ96GY0 325 aa12.67□□□□□ -0.38
NPHP4-211ENST00000622020 TMEM70Q9BUB7 260 aa12.67□□□□□ -0.38
NPHP4-211ENST00000622020 WASHC3Q9Y3C0 194 aa12.67□□□□□ -0.38
NPHP4-211ENST00000622020 VAMP3Q15836 100 aa12.66□□□□□ -0.38
NPHP4-211ENST00000622020 EXOC3-AS1Q8N2X6 119 aa12.66□□□□□ -0.38
NPHP4-211ENST00000622020 DAZAP1Q96EP5 407 aaKnown RBP12.66□□□□□ -0.38
NPHP4-211ENST00000622020 LINC00312Q9Y6C7 94 aa12.66□□□□□ -0.38
NPHP4-211ENST00000622020 COX11Q9Y6N1 276 aa12.66□□□□□ -0.38
NPHP4-211ENST00000622020 OTOGLQ3ZCN5 2332 aa12.66□□□□□ -0.38
NPHP4-211ENST00000622020 CBY3A6NI87 242 aa12.66□□□□□ -0.38
NPHP4-211ENST00000622020 CD40P25942 277 aa12.66□□□□□ -0.38
NPHP4-211ENST00000622020 HBBP68871 147 aa12.66□□□□□ -0.38
NPHP4-211ENST00000622020 OR4C5Q8NGB2 326 aa12.66□□□□□ -0.38
NPHP4-211ENST00000622020 LOC102724200A0A096LPH7 203 aaPredicted RBP12.65□□□□□ -0.38
NPHP4-211ENST00000622020 K7EM74 188 aa12.65□□□□□ -0.38
NPHP4-211ENST00000622020 ZNF738Q8NE65 137 aa12.65□□□□□ -0.38
NPHP4-211ENST00000622020 OR4F17Q8NGA8 305 aa12.65□□□□□ -0.38
NPHP4-211ENST00000622020 OR5AN1Q8NGI8 311 aa12.65□□□□□ -0.38
NPHP4-211ENST00000622020 IGFBPL1Q8WX77 278 aa12.65□□□□□ -0.38
NPHP4-211ENST00000622020 GPR82Q96P67 336 aa12.65□□□□□ -0.38
NPHP4-211ENST00000622020 CACNA1BQ00975 2339 aa12.65□□□□□ -0.38
NPHP4-211ENST00000622020 IGHV2-26A0A0B4J1V2 119 aa12.65□□□□□ -0.38
NPHP4-211ENST00000622020 IGHV1-24A0A0C4DH33 117 aa12.65□□□□□ -0.38
NPHP4-211ENST00000622020 LEPROTL1O95214 131 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms