RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 UNQ6494/PRO21346Q6UXR6 183 aa7.51□□□□□ -1.21
PDPN-212ENST00000621990 C19orf35Q6ZS72 473 aa7.51□□□□□ -1.21
PDPN-212ENST00000621990 OR1B1Q8NGR6 318 aa7.51□□□□□ -1.21
PDPN-212ENST00000621990 SRSF12Q8WXF0 261 aaKnown RBP7.51□□□□□ -1.21
PDPN-212ENST00000621990 EPDR1Q9UM22 224 aa7.51□□□□□ -1.21
PDPN-212ENST00000621990 SERF1AO75920 110 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 IGLC1P0CG04 106 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 COX7A1P24310 79 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 TPPP2P59282 170 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 PRB3Q04118 309 aaPredicted RBP7.5□□□□□ -1.21
PDPN-212ENST00000621990 BAGE2Q86Y30 109 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 TMEM190Q8WZ59 177 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 MS4A10Q96PG2 267 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 MLST8Q9BVC4 326 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 FBXL15Q9H469 300 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 ZNF705GA8MUZ8 300 aaPredicted RBP7.5□□□□□ -1.21
PDPN-212ENST00000621990 HLA-DQA1P01909 254 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 C16orf54Q6UWD8 224 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 CFHR4Q92496 578 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 FAM168AQ92567 244 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 RAB1BQ9H0U4 201 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 TMEM14CQ9P0S9 112 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 NBEAP1P0C6P0 100 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 Q6ZWC4 215 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 NHLRC2Q8NBF2 726 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 NPBQ8NG41 125 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 GRAMD2BQ96HH9 432 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 ATG101Q9BSB4 218 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 GNB4Q9HAV0 340 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 NAT8BQ9UHF3 227 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 NAGKQ9UJ70 344 aa7.5□□□□□ -1.21
PDPN-212ENST00000621990 ODF3BA8MYP8 253 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 M0R1W7 72 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 TIMM23O14925 209 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 NDUFA3O95167 84 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 TCL1AP56279 114 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 C5orf17Q8NAS9 161 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 NUDT10Q8NFP7 164 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 NUDT11Q96G61 164 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 CHRDL1Q9BU40 450 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 NDUFAF3Q9BU61 184 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 CBLN4Q9NTU7 201 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 ONECUT1Q9UBC0 465 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 TRAV34A0A0B4J273 112 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 KIR2DL5BA0A0G2JN68 375 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 KIR2DL5BA0A0G2JPC4 375 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 F2Z2F3 143 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 BMPR1BO00238 502 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 TOMM40O96008 361 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 CA1P00915 261 aaPredicted RBP7.49□□□□□ -1.21
PDPN-212ENST00000621990 LTAP01374 205 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 APELAP0DMC3 54 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 HTR1DP28221 377 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 GNG5P63218 68 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 C1orf194Q5T5A4 169 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 KIR2DL5AQ8N109 375 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 TSKUQ8WUA8 353 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 FMC1Q96HJ9 113 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 GPR82Q96P67 336 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 MRPL27Q9P0M9 148 aaKnown RBP7.49□□□□□ -1.21
PDPN-212ENST00000621990 DPM3Q9P2X0 92 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 RAXQ9Y2V3 346 aa7.49□□□□□ -1.21
PDPN-212ENST00000621990 HIST1H1EP10412 219 aaKnown RBP7.48□□□□□ -1.21
PDPN-212ENST00000621990 PSG1P11464 419 aa7.48□□□□□ -1.21
PDPN-212ENST00000621990 LBHQ53QV2 105 aaPredicted RBP7.48□□□□□ -1.21
PDPN-212ENST00000621990 BAGE3Q86Y29 109 aa7.48□□□□□ -1.21
PDPN-212ENST00000621990 NEU4Q8WWR8 484 aaPredicted RBP7.48□□□□□ -1.21
PDPN-212ENST00000621990 TIMD4Q96H15 378 aa7.48□□□□□ -1.21
PDPN-212ENST00000621990 SERTAD4Q9NUC0 356 aa7.48□□□□□ -1.21
PDPN-212ENST00000621990 HIGD1AQ9Y241 93 aa7.48□□□□□ -1.21
PDPN-212ENST00000621990 POLR3KQ9Y2Y1 108 aaPredicted RBP7.48□□□□□ -1.21
PDPN-212ENST00000621990 PGPA6NDG6 321 aa7.48□□□□□ -1.21
PDPN-212ENST00000621990 K7EIM0 57 aa7.48□□□□□ -1.21
PDPN-212ENST00000621990 NBR2O15453 112 aa7.48□□□□□ -1.21
PDPN-212ENST00000621990 SPINK4O60575 86 aa7.48□□□□□ -1.21
PDPN-212ENST00000621990 SCGB1D1O95968 90 aa7.48□□□□□ -1.21
PDPN-212ENST00000621990 IGKV1-17P01599 117 aa7.48□□□□□ -1.21
PDPN-212ENST00000621990 SLC25A5P05141 298 aaKnown RBP7.48□□□□□ -1.21
PDPN-212ENST00000621990 BRS3P32247 399 aa7.48□□□□□ -1.21
PDPN-212ENST00000621990 SLC35B1P78383 322 aa7.48□□□□□ -1.21
PDPN-212ENST00000621990 USF2Q15853 346 aaPredicted RBP7.48□□□□□ -1.21
PDPN-212ENST00000621990 NUP35Q8NFH5 326 aa7.48□□□□□ -1.21
PDPN-212ENST00000621990 BLNKQ8WV28 456 aa7.48□□□□□ -1.21
PDPN-212ENST00000621990 PRSS22Q9GZN4 317 aa7.48□□□□□ -1.21
PDPN-212ENST00000621990 WNT10AQ9GZT5 417 aa7.48□□□□□ -1.21
PDPN-212ENST00000621990 IGHV3-21A0A0B4J1V1 117 aa7.47□□□□□ -1.21
PDPN-212ENST00000621990 TCRAP04437 139 aa7.47□□□□□ -1.21
PDPN-212ENST00000621990 GPX1P07203 203 aa7.47□□□□□ -1.21
PDPN-212ENST00000621990 HOXB4P17483 251 aaPredicted RBP7.47□□□□□ -1.21
PDPN-212ENST00000621990 PRTN3P24158 256 aa7.47□□□□□ -1.21
PDPN-212ENST00000621990 CEACAM3P40198 252 aa7.47□□□□□ -1.21
PDPN-212ENST00000621990 UBE2G1P62253 170 aa7.47□□□□□ -1.21
PDPN-212ENST00000621990 CT83Q5H943 113 aa7.47□□□□□ -1.21
PDPN-212ENST00000621990 MRPL54Q6P161 138 aaKnown RBP7.47□□□□□ -1.21
PDPN-212ENST00000621990 ZNF600Q6ZNG1 722 aa7.47□□□□□ -1.21
PDPN-212ENST00000621990 TEX43Q6ZNM6 134 aa7.47□□□□□ -1.21
PDPN-212ENST00000621990 C1orf122Q6ZSJ8 110 aa7.47□□□□□ -1.21
PDPN-212ENST00000621990 ATP5L2Q7Z4Y8 100 aa7.47□□□□□ -1.21
PDPN-212ENST00000621990 RBM14Q96PK6 669 aaKnown RBP7.47□□□□□ -1.21
PDPN-212ENST00000621990 SLC25A39Q9BZJ4 359 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms