RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 BSPH1Q075Z2 132 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 LGALS9BQ3B8N2 356 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 HSD17B12Q53GQ0 312 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 COL5A1-AS1Q5SY13 56 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 LGALS9CQ6DKI2 356 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 SSX8Q7RTT4 187 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 PHF5AQ7RTV0 110 aaKnown RBP2.27□□□□□ -2.05
BRCA1-229ENST00000621897 LINC00305Q7Z4B0 112 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 TRAPPC6BQ86SZ2 158 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 C3orf22Q8N5N4 141 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 APCDD1LQ8NCL9 501 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 OR10G2Q8NGC3 310 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 OR5C1Q8NGR4 320 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 OR5H6Q8NGV6 325 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 OR4K13Q8NH42 304 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 OR4A5Q8NH83 315 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 NAT14Q8WUY8 206 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 SDF2Q99470 211 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 TBL1YQ9BQ87 522 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 MRPL57Q9BQC6 102 aaKnown RBP2.27□□□□□ -2.05
BRCA1-229ENST00000621897 SHANK2-AS3Q9BTD1 123 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 SPANXDQ9BXN6 97 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 RERGLQ9H628 205 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 LHX9Q9NQ69 397 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 ZNF835Q9Y2P0 537 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 SVILO95425 2214 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 SYNJ1O43426 1573 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 EML6Q6ZMW3 1958 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 MAPKBP1O60336 1514 aa2.27□□□□□ -2.05
BRCA1-229ENST00000621897 MAGI1Q96QZ7 1491 aaPredicted RBP2.26□□□□□ -2.05
BRCA1-229ENST00000621897 KIAA1107Q9UPP5 1409 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 CITO14578 2027 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 A0A1B0GVX0 72 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 BUB1B-PAK6H3BSN5 160 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 I3L521 148 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 OR2T1O43869 369 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 SOD1P00441 154 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 KRASP01116 189 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 IGKV1-17P01599 117 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 ZNF286BP0CG31 522 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 FOXA3P55318 350 aaPredicted RBP2.26□□□□□ -2.05
BRCA1-229ENST00000621897 YPEL3P61236 119 aaPredicted RBP2.26□□□□□ -2.05
BRCA1-229ENST00000621897 MEF2BQ02080 365 aaPredicted RBP2.26□□□□□ -2.05
BRCA1-229ENST00000621897 PLGLB1Q02325 96 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 DEFB116Q30KQ4 102 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 SP6Q3SY56 376 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 AADACL3Q5VUY0 350 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 LCN15Q6UWW0 184 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 GTF2H5Q6ZYL4 71 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 RNF182Q8N6D2 247 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 C15orf56Q8N910 161 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 OR5D14Q8NGL3 314 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 SLC25A46Q96AG3 418 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 DERL1Q9BUN8 251 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 SNRNP25Q9BV90 132 aaKnown RBP2.26□□□□□ -2.05
BRCA1-229ENST00000621897 IL36BQ9NZH7 164 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 METTL1Q9UBP6 276 aaKnown RBP2.26□□□□□ -2.05
BRCA1-229ENST00000621897 SCP2D1Q9UJQ7 156 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 FUT9Q9Y231 359 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 RNF11Q9Y3C5 154 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 MPC1Q9Y5U8 109 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 IER3IP1Q9Y5U9 82 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 CABIN1Q9Y6J0 2220 aa2.26□□□□□ -2.05
BRCA1-229ENST00000621897 KDM5AP29375 1690 aaKnown RBP2.25□□□□□ -2.05
BRCA1-229ENST00000621897 TRAV27A0A087WT01 109 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 IGHV3-49A0A0A0MS15 119 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 TRAV13-1A0A0B4J241 112 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 OR2T8A6NH00 312 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 BBIP1A8MTZ0 92 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 ZNF727A8MUV8 499 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 TMEM256-PLSCR3K7ERE1 68 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 NAPSAO96009 420 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 IGLV3-25P01717 112 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 APCSP02743 223 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 C1QAP02745 245 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 FABP2P12104 132 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 PTHLHP12272 177 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 CRHBPP24387 322 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 S100A4P26447 101 aaKnown RBP2.25□□□□□ -2.05
BRCA1-229ENST00000621897 SRP14P37108 136 aaKnown RBP2.25□□□□□ -2.05
BRCA1-229ENST00000621897 AKR1C2P52895 323 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 HIST1H4AP62805 103 aaKnown RBP2.25□□□□□ -2.05
BRCA1-229ENST00000621897 RPL30P62888 115 aaKnown RBP2.25□□□□□ -2.05
BRCA1-229ENST00000621897 UBE2BP63146 152 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 HSD52Q0P140 79 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 LINC01554Q52M75 96 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 PABPC1L2AQ5JQF8 200 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 MEIG1Q5JSS6 88 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 SPANXN3Q5MJ09 141 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 ZNF678Q5SXM1 525 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 FAM104BQ5XKR9 115 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 RPS19BP1Q86WX3 136 aaKnown RBP2.25□□□□□ -2.05
BRCA1-229ENST00000621897 C4orf33Q8N1A6 199 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 TMEM256Q8N2U0 113 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 DAND5Q8N907 189 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 BRK1Q8WUW1 75 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 ZC2HC1AQ96GY0 325 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 YPEL2Q96QA6 119 aa2.25□□□□□ -2.05
BRCA1-229ENST00000621897 ADAT1Q9BUB4 502 aaKnown RBP2.25□□□□□ -2.05
BRCA1-229ENST00000621897 MRPL32Q9BYC8 188 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms