RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 IGLV1-44P01699 117 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 GCSAMLQ5JQS6 135 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 PVRIGQ6DKI7 326 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 TEX38Q6PEX7 206 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 EIF4E3Q8N5X7 224 aaKnown RBP7.55□□□□□ -1.2
GGA3-223ENST00000621870 ARL6IP6Q8N6S5 226 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 OR1P1Q8NH06 330 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 GSX1Q9H4S2 264 aaPredicted RBP7.55□□□□□ -1.2
GGA3-223ENST00000621870 ZNF688P0C7X2 276 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 SCGB1C2P0DMR2 95 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 RPS20P60866 119 aaKnown RBP7.55□□□□□ -1.2
GGA3-223ENST00000621870 LY6G6FQ5SQ64 297 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 IL17RELQ6ZVW7 336 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 TMEM167AQ8TBQ9 72 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 C18orf12Q96KH6 178 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 RNF126Q9BV68 326 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 PEX7O00628 323 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 IGKV1-5P01602 117 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 SUPT4H1P63272 117 aaKnown RBP7.55□□□□□ -1.2
GGA3-223ENST00000621870 C19orf54Q5BKX5 351 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 DPH3Q96FX2 82 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 SPRY4Q9C004 299 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 Q9H3A6 140 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 IGLV3-9A0A075B6K5 115 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 TMEM262E9PQX1 116 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 SMIM6P0DI80 62 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 FOXA3P55318 350 aaPredicted RBP7.55□□□□□ -1.2
GGA3-223ENST00000621870 MAP1LC3CQ9BXW4 147 aa7.55□□□□□ -1.2
GGA3-223ENST00000621870 SCO2A0A1W2PP80 73 aa7.54□□□□□ -1.2
GGA3-223ENST00000621870 AREGP15514 252 aa7.54□□□□□ -1.2
GGA3-223ENST00000621870 RPL15P61313 204 aaKnown RBP7.54□□□□□ -1.2
GGA3-223ENST00000621870 HERVK_113P61574 105 aa7.54□□□□□ -1.2
GGA3-223ENST00000621870 PSMG4Q5JS54 123 aa7.54□□□□□ -1.2
GGA3-223ENST00000621870 NRGNQ92686 78 aa7.54□□□□□ -1.2
GGA3-223ENST00000621870 TBX15Q96SF7 602 aa7.54□□□□□ -1.2
GGA3-223ENST00000621870 REG4Q9BYZ8 158 aa7.54□□□□□ -1.2
GGA3-223ENST00000621870 WDR83OSQ9Y284 106 aa7.54□□□□□ -1.2
GGA3-223ENST00000621870 TBL2Q9Y4P3 447 aaKnown RBP7.54□□□□□ -1.2
GGA3-223ENST00000621870 OR4C46A6NHA9 309 aa7.54□□□□□ -1.2
GGA3-223ENST00000621870 PSG1P11464 419 aa7.54□□□□□ -1.2
GGA3-223ENST00000621870 LOXP28300 417 aaPredicted RBP7.54□□□□□ -1.2
GGA3-223ENST00000621870 NDPQ00604 133 aa7.54□□□□□ -1.2
GGA3-223ENST00000621870 FBLN7Q53RD9 439 aa7.54□□□□□ -1.2
GGA3-223ENST00000621870 MBNL3Q9NUK0 354 aaKnown RBP7.54□□□□□ -1.2
GGA3-223ENST00000621870 TRBV20OR9-2A0A075B6H5 130 aa7.54□□□□□ -1.2
GGA3-223ENST00000621870 HLA-DQA1P01909 254 aa7.54□□□□□ -1.2
GGA3-223ENST00000621870 MT-ND6P03923 174 aa7.54□□□□□ -1.2
GGA3-223ENST00000621870 GATA3P23771 443 aa7.54□□□□□ -1.2
GGA3-223ENST00000621870 RNASE4P34096 147 aaKnown RBP7.54□□□□□ -1.2
GGA3-223ENST00000621870 TCF24Q7RTU0 167 aa7.54□□□□□ -1.2
GGA3-223ENST00000621870 WDR86Q86TI4 376 aa7.54□□□□□ -1.2
GGA3-223ENST00000621870 ZNF257Q9Y2Q1 563 aa7.54□□□□□ -1.2
GGA3-223ENST00000621870 SLC17A3O00476 420 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 TRGC2P03986 189 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 GATA4P43694 442 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 UBE2E1P51965 193 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 GNG5P63218 68 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 QRFPP83859 136 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 HERPUD1Q15011 391 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 C19orf35Q6ZS72 473 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 DMRTC2Q8IXT2 367 aaPredicted RBP7.53□□□□□ -1.2
GGA3-223ENST00000621870 AP5S1Q9NUS5 200 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 PLXNA2O75051 1894 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 PRSS47A8MTI9 375 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 ZNF324O75467 553 aaPredicted RBP7.53□□□□□ -1.2
GGA3-223ENST00000621870 PLA2G5P39877 138 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 ASIPP42127 132 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 SRSF9Q13242 221 aaKnown RBP eCLIP7.53□□□□□ -1.2
GGA3-223ENST00000621870 EFNB3Q15768 340 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 VAMP3Q15836 100 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 SRSF7Q16629 238 aaKnown RBP eCLIP7.53□□□□□ -1.2
GGA3-223ENST00000621870 RNF151Q2KHN1 245 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 FAM71F2Q6NXP2 309 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 RNF5Q99942 180 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 PRO1933Q9H354 126 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 IGHV1-69DA0A0B4J2H0 117 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 PMS2P5A8MQ11 134 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 VENTXO95231 258 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 IGHV1-69P01742 117 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 CD7P09564 240 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 SMAGPQ0VAQ4 97 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 MAJINQ3KP22 176 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 GTSCR1Q86UQ5 136 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 MIEN1Q9BRT3 115 aa7.53□□□□□ -1.2
GGA3-223ENST00000621870 NUDT3O95989 172 aa7.52□□□□□ -1.21
GGA3-223ENST00000621870 MLANAQ16655 118 aa7.52□□□□□ -1.21
GGA3-223ENST00000621870 KIR2DL4Q99706 377 aa7.52□□□□□ -1.21
GGA3-223ENST00000621870 TRAV5A0A0B4J249 113 aa7.52□□□□□ -1.21
GGA3-223ENST00000621870 A0A1B0GWJ7 208 aa7.52□□□□□ -1.21
GGA3-223ENST00000621870 M0R3E3 92 aa7.52□□□□□ -1.21
GGA3-223ENST00000621870 OR1N2Q8NGR9 330 aa7.52□□□□□ -1.21
GGA3-223ENST00000621870 PACRGQ96M98 296 aaPredicted RBP7.52□□□□□ -1.21
GGA3-223ENST00000621870 SLC50A1Q9BRV3 221 aa7.52□□□□□ -1.21
GGA3-223ENST00000621870 TRBV6-6A0A0A6YYG2 114 aa7.52□□□□□ -1.21
GGA3-223ENST00000621870 IGKV1-6A0A0C4DH72 117 aa7.52□□□□□ -1.21
GGA3-223ENST00000621870 OVOL3O00110 214 aa7.52□□□□□ -1.21
GGA3-223ENST00000621870 DKK1O94907 266 aa7.52□□□□□ -1.21
GGA3-223ENST00000621870 SRIP30626 198 aa7.52□□□□□ -1.21
GGA3-223ENST00000621870 TREML4Q6UXN2 200 aa7.52□□□□□ -1.21
GGA3-223ENST00000621870 C12orf54Q6X4T0 127 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 447.5 ms