RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 RBMY1CP0DJD4 496 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 HIST1H2BOP23527 126 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 HIST1H2BBP33778 126 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 HIST1H2BDP58876 126 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 HIST1H2BCP62807 126 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 HIST2H2BEQ16778 126 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 HIST1H2BHQ93079 126 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 HIST1H2BNQ99877 126 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 HIST1H2BMQ99879 126 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 RPP21Q9H633 154 aaKnown RBP8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 TRGV1A0A0A0MS02 117 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 PRR32B1ATL7 298 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 CBLN1P23435 193 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 PRTN3P24158 256 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 RCHY1Q96PM5 261 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 VCX2Q9H322 139 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 BUB1B-PAK6H3BSN5 160 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 SLC25A20O43772 301 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 DMRTA1Q5VZB9 504 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 BEND2Q8NDZ0 799 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 C18orf15Q96N68 181 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 CADP27708 2225 aa8.06□□□□□ -1.12
CLTCL1-211ENST00000621271 A0A087WV48 116 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 IGKV1-9A0A0C4DH69 117 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 TRBV7-9A0A0J9YWB2 115 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 ADARB2-AS1A8MUL3 147 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 J3QLI3 93 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 TNFSF13O75888 250 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 FABP2P12104 132 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 RIPPLY3P57055 190 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 NXT2Q9NPJ8 142 aaKnown RBP8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 FAM223BA6NKX1 122 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 FOXA3P55318 350 aaPredicted RBP8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 FAM223AQ8IWN6 122 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 KIR3DL3Q8N743 410 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 IGKV1D-13A0A0B4J2D9 117 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 IGKV3D-20A0A0C4DH25 116 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 RAMP3O60896 148 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 IGKV1-13P0DP09 117 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 PLP1P60201 277 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 PEF1Q9UBV8 284 aaKnown RBP8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 ZNF414Q96IQ9 312 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 NYNRINQ9P2P1 1898 aaKnown RBP8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 DOCK6Q96HP0 2047 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 INSP01308 110 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 ZNF124Q15973 351 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 LCN12Q6JVE5 192 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 SLC25A48Q6ZT89 311 aaKnown RBP8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 C1QL4Q86Z23 238 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 NABP1Q96AH0 204 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 NUDT11Q96G61 164 aa8.05□□□□□ -1.12
CLTCL1-211ENST00000621271 USF3Q68DE3 2245 aa8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 FAM90A9PA6NNJ1 464 aa8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 WISP1O95388 367 aa8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 OTX1P32242 354 aaPredicted RBP8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 RUSC1-AS1Q66K80 236 aa8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 CD177Q8N6Q3 437 aa8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 GAFA1Q96PS6 74 aa8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 C10orf55Q5SWW7 151 aa8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 TMEM170AQ8WVE7 144 aa8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 UBE2E2Q96LR5 201 aa8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 RALGAPA1Q6GYQ0 2036 aa8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 SCN5AQ14524 2016 aa8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 UBE2E1P51965 193 aa8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 RPL36AP83881 106 aaKnown RBP8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 ATOH7Q8N100 152 aa8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 RPL36ALQ969Q0 106 aaKnown RBP8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 C18orf12Q96KH6 178 aa8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 ZNF319Q9P2F9 582 aa8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 CREBBPQ92793 2442 aa8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 SYNJ2BPP57105 145 aa8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 ORMDL3Q8N138 153 aa8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 OR10W1Q8NGF6 305 aa8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 CYTL1Q9NRR1 136 aa8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 IL36BQ9NZH7 164 aa8.04□□□□□ -1.12
CLTCL1-211ENST00000621271 TRAV8-6A0A0B4J262 113 aa8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 IGHV1-69DA0A0B4J2H0 117 aa8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 EREGO14944 169 aa8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 IGHV1-69P01742 117 aa8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 PIP4P1Q86T03 277 aa8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 PGPEP1Q9NXJ5 209 aa8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 PDCD11Q14690 1871 aaKnown RBP8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 PATJQ8NI35 1801 aa8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 TRAV9-1A0A075B6T8 112 aa8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 LYPD2Q6UXB3 125 aa8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 C9orf139Q6ZV77 190 aa8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 ZMAT4Q9H898 229 aa8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 PSG8Q9UQ74 426 aa8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 F11RQ9Y624 299 aaKnown RBP8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 CACNA1DQ01668 2161 aa8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 RPL15P61313 204 aaKnown RBP8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 RPL23P62829 140 aaKnown RBP8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 SPOCK3Q9BQ16 436 aa8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 SEPSECSQ9HD40 501 aaKnown RBP8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 A0A1B0GWJ7 208 aa8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 SCO2A0A1W2PP80 73 aa8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 DEFB130BP0DP73 79 aa8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 DEFB130AP0DP74 79 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms