RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 CFHR1Q03591 330 aa8.22□□□□□ -1.09
COL4A6-210ENST00000621266 SPATA31B1PQ5VZV4 182 aa8.22□□□□□ -1.09
COL4A6-210ENST00000621266 ACP7Q6ZNF0 438 aa8.22□□□□□ -1.09
COL4A6-210ENST00000621266 IGHV3-73A0A0B4J1V6 119 aa8.22□□□□□ -1.09
COL4A6-210ENST00000621266 TMEM8BA6NDV4 472 aa8.22□□□□□ -1.09
COL4A6-210ENST00000621266 ZNF415Q09FC8 603 aa8.22□□□□□ -1.09
COL4A6-210ENST00000621266 TMEM144Q7Z5S9 345 aa8.22□□□□□ -1.09
COL4A6-210ENST00000621266 TMEM126AQ9H061 195 aa8.22□□□□□ -1.09
COL4A6-210ENST00000621266 SPANXA1Q9NS26 97 aa8.22□□□□□ -1.09
COL4A6-210ENST00000621266 GREB1LQ9C091 1923 aaPredicted RBP8.22□□□□□ -1.09
COL4A6-210ENST00000621266 ZSWIM8A7E2V4 1837 aa8.22□□□□□ -1.09
COL4A6-210ENST00000621266 OSR1Q8TAX0 266 aaPredicted RBP8.22□□□□□ -1.09
COL4A6-210ENST00000621266 CYTL1Q9NRR1 136 aa8.22□□□□□ -1.09
COL4A6-210ENST00000621266 B5MCH6 92 aa8.22□□□□□ -1.09
COL4A6-210ENST00000621266 ZNF883P0CG24 379 aa8.22□□□□□ -1.09
COL4A6-210ENST00000621266 ZNF474Q6S9Z5 364 aaPredicted RBP8.22□□□□□ -1.09
COL4A6-210ENST00000621266 TMEM54Q969K7 222 aa8.22□□□□□ -1.09
COL4A6-210ENST00000621266 SCN2AQ99250 2005 aa8.22□□□□□ -1.09
COL4A6-210ENST00000621266 TRAV13-1A0A0B4J241 112 aa8.21□□□□□ -1.09
COL4A6-210ENST00000621266 A0A1B0GUS0 222 aa8.21□□□□□ -1.09
COL4A6-210ENST00000621266 GAGE12HA6NDE8 117 aa8.21□□□□□ -1.09
COL4A6-210ENST00000621266 HAPLN4Q86UW8 402 aa8.21□□□□□ -1.09
COL4A6-210ENST00000621266 NUP35Q8NFH5 326 aa8.21□□□□□ -1.09
COL4A6-210ENST00000621266 IGKV2-40A0A087WW87 121 aaPredicted RBP8.21□□□□□ -1.09
COL4A6-210ENST00000621266 INS-IGF2F8WCM5 200 aa8.21□□□□□ -1.09
COL4A6-210ENST00000621266 K7EP13 123 aa8.21□□□□□ -1.09
COL4A6-210ENST00000621266 INSP01308 110 aa8.21□□□□□ -1.09
COL4A6-210ENST00000621266 IGKV2D-40P01614 121 aaPredicted RBP8.21□□□□□ -1.09
COL4A6-210ENST00000621266 CSRP3P50461 194 aa8.21□□□□□ -1.09
COL4A6-210ENST00000621266 GAGE1Q13065 139 aa8.21□□□□□ -1.09
COL4A6-210ENST00000621266 PRSS57Q6UWY2 283 aa8.21□□□□□ -1.09
COL4A6-210ENST00000621266 LINC01551Q86U37 167 aa8.21□□□□□ -1.09
COL4A6-210ENST00000621266 RPRMLQ8N4K4 120 aa8.21□□□□□ -1.09
COL4A6-210ENST00000621266 CACNG8Q8WXS5 425 aa8.21□□□□□ -1.09
COL4A6-210ENST00000621266 SMKR1H3BMG3 65 aa8.21□□□□□ -1.1
COL4A6-210ENST00000621266 SUMO4Q6EEV6 95 aa8.21□□□□□ -1.1
COL4A6-210ENST00000621266 ARPC1AQ92747 370 aa8.21□□□□□ -1.1
COL4A6-210ENST00000621266 A0A087WV48 116 aa8.21□□□□□ -1.1
COL4A6-210ENST00000621266 LYZL1Q6UWQ5 148 aa8.21□□□□□ -1.1
COL4A6-210ENST00000621266 DNAJC13O75165 2243 aa8.21□□□□□ -1.1
COL4A6-210ENST00000621266 IGKV1D-43A0A0B4J1Z2 117 aa8.21□□□□□ -1.1
COL4A6-210ENST00000621266 C9orf118A6NHY6 69 aa8.21□□□□□ -1.1
COL4A6-210ENST00000621266 IGLV3-19P01714 112 aa8.21□□□□□ -1.1
COL4A6-210ENST00000621266 OR9G9P0C7N8 305 aa8.21□□□□□ -1.1
COL4A6-210ENST00000621266 PLEKHB2Q96CS7 222 aa8.21□□□□□ -1.1
COL4A6-210ENST00000621266 IGHV3-11P01762 117 aa8.2□□□□□ -1.1
COL4A6-210ENST00000621266 HGFACQ04756 655 aa8.2□□□□□ -1.1
COL4A6-210ENST00000621266 ZC2HC1BQ5TFG8 222 aa8.2□□□□□ -1.1
COL4A6-210ENST00000621266 TMEM158Q8WZ71 300 aa8.2□□□□□ -1.1
COL4A6-210ENST00000621266 NDUFA2O43678 99 aa8.2□□□□□ -1.1
COL4A6-210ENST00000621266 DPH3P1Q9H4G8 78 aa8.2□□□□□ -1.1
COL4A6-210ENST00000621266 TCRBV4S1A1TA0A5B7 111 aa8.2□□□□□ -1.1
COL4A6-210ENST00000621266 FAM27E3Q08E93 113 aa8.2□□□□□ -1.1
COL4A6-210ENST00000621266 ETDBQ3ZM63 59 aa8.2□□□□□ -1.1
COL4A6-210ENST00000621266 MTCL1Q9Y4B5 1905 aaKnown RBP8.2□□□□□ -1.1
COL4A6-210ENST00000621266 MGAMO43451 1857 aa8.2□□□□□ -1.1
COL4A6-210ENST00000621266 RASL11AQ6T310 242 aa8.2□□□□□ -1.1
COL4A6-210ENST00000621266 PPP1R32Q7Z5V6 425 aa8.2□□□□□ -1.1
COL4A6-210ENST00000621266 FAM186AA6NE01 2351 aa8.2□□□□□ -1.1
COL4A6-210ENST00000621266 SRD5A1P18405 259 aa8.2□□□□□ -1.1
COL4A6-210ENST00000621266 ADCYAP1P18509 176 aa8.2□□□□□ -1.1
COL4A6-210ENST00000621266 VWCEQ96DN2 955 aa8.2□□□□□ -1.1
COL4A6-210ENST00000621266 TRBV20-1A0A075B6N2 111 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 F2Z2F3 143 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 IGHV2-70P01814 119 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 A0A0G2JMZ2 1700 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 LRRC37A2A6NM11 1700 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 ZDBF2Q9HCK1 2354 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 LEPROTO15243 131 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 CELA3AP09093 270 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 SELLP14151 372 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 ANXA2RQ3ZCQ2 193 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 PRB1P04280 392 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 CD59P13987 128 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 DNAJC30Q96LL9 226 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 TFF1P04155 84 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 RNF125Q96EQ8 232 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 C15orf61A6NNL5 157 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 RPL32P62910 135 aaKnown RBP8.19□□□□□ -1.1
COL4A6-210ENST00000621266 PMVKQ15126 192 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 EXOC3-AS1Q8N2X6 119 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 PPDPFLQ8WWR9 84 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 CHCHD5Q9BSY4 110 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 MDC1Q14676 2089 aaKnown RBP8.19□□□□□ -1.1
COL4A6-210ENST00000621266 CKAP5Q14008 2032 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 SAA2-SAA4A0A096LPE2 208 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 TRAV40A0A0B4J280 105 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 SAA2P0DJI9 122 aaPredicted RBP8.19□□□□□ -1.1
COL4A6-210ENST00000621266 TMEM30BQ3MIR4 351 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 C5orf47Q569G3 176 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 FAM168AQ92567 244 aa8.19□□□□□ -1.1
COL4A6-210ENST00000621266 MYOFQ9NZM1 2061 aa8.18□□□□□ -1.1
COL4A6-210ENST00000621266 UPK2O00526 184 aa8.18□□□□□ -1.1
COL4A6-210ENST00000621266 RS1O15537 224 aa8.18□□□□□ -1.1
COL4A6-210ENST00000621266 CSRP1P21291 193 aaKnown RBP8.18□□□□□ -1.1
COL4A6-210ENST00000621266 SMIM20Q8N5G0 67 aa8.18□□□□□ -1.1
COL4A6-210ENST00000621266 FAM216BQ8N7L0 139 aa8.18□□□□□ -1.1
COL4A6-210ENST00000621266 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.18□□□□□ -1.1
COL4A6-210ENST00000621266 IMMP1LQ96LU5 166 aa8.18□□□□□ -1.1
COL4A6-210ENST00000621266 PRADC1Q9BSG0 188 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms