RNA–Protein interactions for RNA: ENST00000620552.4

AGRN-210, Transcript of agrin, humanhuman

TSL 5 BASIC

Gene AGRN, Length 7,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-210ENST00000620552 SSC4DQ8WTU2 575 aa11.65□□□□□ -0.54
AGRN-210ENST00000620552 A0A1B0GW15 77 aa11.65□□□□□ -0.54
AGRN-210ENST00000620552 CD28P10747 220 aa11.65□□□□□ -0.54
AGRN-210ENST00000620552 DEFB104AQ8WTQ1 72 aa11.65□□□□□ -0.54
AGRN-210ENST00000620552 RCHY1Q96PM5 261 aa11.65□□□□□ -0.54
AGRN-210ENST00000620552 SEPSECSQ9HD40 501 aaKnown RBP11.65□□□□□ -0.54
AGRN-210ENST00000620552 TMEM183AQ8IXX5 376 aa11.65□□□□□ -0.55
AGRN-210ENST00000620552 FAM89BQ8N5H3 189 aa11.65□□□□□ -0.55
AGRN-210ENST00000620552 IGHV3-64A0A075B6Q5 118 aa11.64□□□□□ -0.55
AGRN-210ENST00000620552 RNF223E7ERA6 249 aa11.64□□□□□ -0.55
AGRN-210ENST00000620552 PSG8Q9UQ74 426 aa11.64□□□□□ -0.55
AGRN-210ENST00000620552 COL8A2P25067 703 aa11.64□□□□□ -0.55
AGRN-210ENST00000620552 COQ2Q96H96 371 aa11.64□□□□□ -0.55
AGRN-210ENST00000620552 MINOS1Q5TGZ0 78 aa11.64□□□□□ -0.55
AGRN-210ENST00000620552 PIP4P2Q8N4L2 257 aa11.64□□□□□ -0.55
AGRN-210ENST00000620552 CD177Q8N6Q3 437 aa11.64□□□□□ -0.55
AGRN-210ENST00000620552 MED12Q93074 2177 aa11.64□□□□□ -0.55
AGRN-210ENST00000620552 BPESC1Q9GZL8 116 aa11.64□□□□□ -0.55
AGRN-210ENST00000620552 MINOS1-NBL1R4GNA1 71 aa11.64□□□□□ -0.55
AGRN-210ENST00000620552 OVOL1O14753 267 aa11.64□□□□□ -0.55
AGRN-210ENST00000620552 MDS2Q8NDY4 140 aa11.64□□□□□ -0.55
AGRN-210ENST00000620552 NEUROG1Q92886 237 aa11.64□□□□□ -0.55
AGRN-210ENST00000620552 TRAV12-3A0A0B4J271 114 aa11.63□□□□□ -0.55
AGRN-210ENST00000620552 LYPD3O95274 346 aa11.63□□□□□ -0.55
AGRN-210ENST00000620552 PRR30Q53SZ7 412 aaPredicted RBP11.63□□□□□ -0.55
AGRN-210ENST00000620552 ZNF329Q86UD4 541 aa11.63□□□□□ -0.55
AGRN-210ENST00000620552 TRBV7-1A0A0A6YYK4 115 aa11.63□□□□□ -0.55
AGRN-210ENST00000620552 K7ERU9 68 aa11.63□□□□□ -0.55
AGRN-210ENST00000620552 SRSF1Q07955 248 aaKnown RBP eCLIP11.63□□□□□ -0.551e-7■□□□□ 9
AGRN-210ENST00000620552 EFNA2O43921 213 aa11.63□□□□□ -0.55
AGRN-210ENST00000620552 IGHV3-53P01767 116 aa11.63□□□□□ -0.55
AGRN-210ENST00000620552 SRP19P09132 144 aaKnown RBP11.63□□□□□ -0.55
AGRN-210ENST00000620552 CMC4P56277 68 aaPredicted RBP11.63□□□□□ -0.55
AGRN-210ENST00000620552 PARD6GQ9BYG4 376 aaPredicted RBP11.63□□□□□ -0.55
AGRN-210ENST00000620552 NXT2Q9NPJ8 142 aaKnown RBP11.63□□□□□ -0.55
AGRN-210ENST00000620552 TRAV5A0A0B4J249 113 aa11.63□□□□□ -0.55
AGRN-210ENST00000620552 NPIPB5A8MRT5 1133 aa11.63□□□□□ -0.55
AGRN-210ENST00000620552 TANC1Q9C0D5 1861 aa11.63□□□□□ -0.55
AGRN-210ENST00000620552 BUB1B-PAK6H3BSN5 160 aa11.63□□□□□ -0.55
AGRN-210ENST00000620552 EFNB3Q15768 340 aa11.63□□□□□ -0.55
AGRN-210ENST00000620552 IGHV4-39P01824 125 aa11.62□□□□□ -0.55
AGRN-210ENST00000620552 NABP1Q96AH0 204 aa11.62□□□□□ -0.55
AGRN-210ENST00000620552 MSRB2Q9Y3D2 182 aa11.62□□□□□ -0.55
AGRN-210ENST00000620552 RLFQ13129 1914 aa11.62□□□□□ -0.55
AGRN-210ENST00000620552 C10orf55Q5SWW7 151 aa11.62□□□□□ -0.55
AGRN-210ENST00000620552 TEX38Q6PEX7 206 aa11.62□□□□□ -0.55
AGRN-210ENST00000620552 Q96MF0 132 aa11.62□□□□□ -0.55
AGRN-210ENST00000620552 CRYGSP22914 178 aa11.62□□□□□ -0.55
AGRN-210ENST00000620552 SLC25A48Q6ZT89 311 aaKnown RBP11.62□□□□□ -0.55
AGRN-210ENST00000620552 ERVH48-1M5A8F1 160 aa11.62□□□□□ -0.55
AGRN-210ENST00000620552 KIAA1671Q9BY89 1806 aa11.62□□□□□ -0.55
AGRN-210ENST00000620552 PMS2P5A8MQ11 134 aa11.62□□□□□ -0.55
AGRN-210ENST00000620552 M0R1W7 72 aa11.62□□□□□ -0.55
AGRN-210ENST00000620552 UBE2E2Q96LR5 201 aa11.62□□□□□ -0.55
AGRN-210ENST00000620552 TRGV1A0A0A0MS02 117 aa11.61□□□□□ -0.55
AGRN-210ENST00000620552 SRRM5B3KS81 715 aa11.61□□□□□ -0.55
AGRN-210ENST00000620552 NEUROG3Q9Y4Z2 214 aa11.61□□□□□ -0.55
AGRN-210ENST00000620552 ATRXP46100 2492 aa11.61□□□□□ -0.55
AGRN-210ENST00000620552 MST1P26927 711 aa11.61□□□□□ -0.55
AGRN-210ENST00000620552 CKS1BP61024 79 aa11.61□□□□□ -0.55
AGRN-210ENST00000620552 CTAG1AP78358 180 aa11.61□□□□□ -0.55
AGRN-210ENST00000620552 LYPD2Q6UXB3 125 aa11.61□□□□□ -0.55
AGRN-210ENST00000620552 GZMBP10144 247 aa11.61□□□□□ -0.55
AGRN-210ENST00000620552 ADMP35318 185 aa11.61□□□□□ -0.55
AGRN-210ENST00000620552 EXOC3-AS1Q8N2X6 119 aa11.61□□□□□ -0.55
AGRN-210ENST00000620552 RNF182Q8N6D2 247 aa11.61□□□□□ -0.55
AGRN-210ENST00000620552 SCRT1Q9BWW7 348 aa11.61□□□□□ -0.55
AGRN-210ENST00000620552 SLC25A39Q9BZJ4 359 aaPredicted RBP11.61□□□□□ -0.55
AGRN-210ENST00000620552 RPUSD1Q9UJJ7 312 aaKnown RBP11.61□□□□□ -0.55
AGRN-210ENST00000620552 FCN3O75636 299 aa11.61□□□□□ -0.55
AGRN-210ENST00000620552 RUSC1-AS1Q66K80 236 aa11.61□□□□□ -0.55
AGRN-210ENST00000620552 FAM90A9PA6NNJ1 464 aa11.6□□□□□ -0.55
AGRN-210ENST00000620552 GAFA1Q96PS6 74 aa11.6□□□□□ -0.55
AGRN-210ENST00000620552 IGKV1-27A0A075B6S5 117 aa11.6□□□□□ -0.55
AGRN-210ENST00000620552 CLPSP04118 112 aa11.6□□□□□ -0.55
AGRN-210ENST00000620552 IGKV1-12A0A0C4DH73 117 aa11.6□□□□□ -0.55
AGRN-210ENST00000620552 A0A0U1RRA0 63 aa11.6□□□□□ -0.55
AGRN-210ENST00000620552 IGKV1D-12P01611 117 aa11.6□□□□□ -0.55
AGRN-210ENST00000620552 C21orf62-AS1Q17RA5 79 aa11.6□□□□□ -0.55
AGRN-210ENST00000620552 Q5PR19 223 aa11.6□□□□□ -0.55
AGRN-210ENST00000620552 CHTOPQ9Y3Y2 248 aaKnown RBP11.6□□□□□ -0.55
AGRN-210ENST00000620552 RPL23P62829 140 aaKnown RBP11.6□□□□□ -0.55
AGRN-210ENST00000620552 HEPN1Q6WQI6 88 aa11.6□□□□□ -0.55
AGRN-210ENST00000620552 TTC9CQ8N5M4 171 aa11.6□□□□□ -0.55
AGRN-210ENST00000620552 RNF126Q9BV68 326 aa11.6□□□□□ -0.55
AGRN-210ENST00000620552 TDGF1P3P51864 188 aa11.6□□□□□ -0.55
AGRN-210ENST00000620552 CCL20P78556 96 aa11.6□□□□□ -0.55
AGRN-210ENST00000620552 PHLDA1Q8WV24 401 aaPredicted RBP11.6□□□□□ -0.55
AGRN-210ENST00000620552 NOTCH3Q9UM47 2321 aa11.59□□□□□ -0.55
AGRN-210ENST00000620552 IGKV1D-8A0A087WSZ0 117 aa11.59□□□□□ -0.55
AGRN-210ENST00000620552 A0A087WX48 190 aa11.59□□□□□ -0.55
AGRN-210ENST00000620552 ZNF98A6NK75 572 aa11.59□□□□□ -0.55
AGRN-210ENST00000620552 K7ENP7 123 aa11.59□□□□□ -0.55
AGRN-210ENST00000620552 TYMSP04818 313 aa11.59□□□□□ -0.55
AGRN-210ENST00000620552 RIF1Q5UIP0 2472 aaKnown RBP11.59□□□□□ -0.55
AGRN-210ENST00000620552 SLC25A16P16260 332 aa11.59□□□□□ -0.55
AGRN-210ENST00000620552 DDTP30046 118 aa11.59□□□□□ -0.55
AGRN-210ENST00000620552 PSG1P11464 419 aa11.59□□□□□ -0.55
AGRN-210ENST00000620552 KLF17Q5JT82 389 aaPredicted RBP11.59□□□□□ -0.55
AGRN-210ENST00000620552 CYSLTR1Q9Y271 337 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms